Hirundo rustica (Barn swallow): 120747800
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Entry
120747800 CDS
T09369
Name
(RefSeq) cohesin subunit SA-2-like isoform X1
KO
K06671
cohesin complex subunit SA-1/2
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120747800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrt03036
]
120747800
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
120747800
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
120747800
NCBI-ProteinID:
XP_039909781
LinkDB
All DBs
Position
2:complement(84991960..85050247)
Genome browser
AA seq
1204 aa
AA seq
DB search
MIAEPNAASNLPSQKENAVHDETVPEPAAQNGTCVRNGNLKTPREKRRVREQCENIRRNS
TSSRRVSQLQNGEVVEAVTLFEVVSMGKQAMQSVVVDWVEAYKQDRNVALLDLINFFIQC
SGCQGMVTAEMFQSLYKKDVMRKMTETFDKETGLQYKKFMAYPWILTVTWPVDMDNEDYP
LIRTGPYWKKFKANFCEFIAVLVQQCQCSILYDNYLMDTLISLLTGLADSMVRAFRHTST
LAAMKLLTAVVSVHLNLDVNKHNAQRLYEVEKKRISGKRTSYRLDQLERKRKEYEHKLLE
IQHMMNAIFKGTFLNRYRDVIPEIRATCIEEIGCWIKTYPDAFLNDSYLKYVGWMLYDKQ
PEVRLKCLLGLQGIYSRKELVSRMDLFTNRFKDRIVSMPLDKDHEVAVQAMKLLMLMSQN
CEDVLSAEDCEMLYQFVYTTHRPLAVAAGEFLYKRLLCREGDKELQPKGGGKLGANTDQL
KRLINFFLESELHKHVAYLVDSLWDWAGKFLKDWECMTTLLLKNAEVGEALSDAEESALI
EIILATVREAAEGHPPVGRGAAKKILSVKEKKIQLEDCTKITEHFITVLPQLLAKYSTDA
QKVANLLQIPQYYDLHVYSTGHLEKHLDALLREIKDIVAKHSDMSVLEASSRTYDVLCRE
EIAIYSQVDCARTQMIDELMKQLNQLLDCFWQKEGGFCTDAGEISRMHSTLRRIAAFHNA
HDLTKWSLYDKTLRFLVFEMEHGSLPVLIILPALQCTYFSLLWQLAAVSENSPKETLFLL
RRELGRFSQICTCFLHHKERDVREKAFMILCDWLLILSHLDSNNNEETVGLLGYLPNTSL
QEKLFSFIQEHIFMDEEKEKEDVTEEEKDETCRLDDLHEKRRLLAAYCKLIVYNVVDMTA
AAEIYKYYVKTYSDFGDIIKETLSKTRYNNKIQSAKTLILCLQQLFQTLVESQDSSSGVD
YSSPSFANIKELARRFSLTFGWDQVKSRESIAMIHKEGIEFAFHGATGVDGKCLPPNLSF
LLIISEFSNKLLKPDKRLVYSYLQRYITEPLSCRGDEWQPLVWYRNSLLANEDEESSVLG
SLGEWAPMGSSKTSSFKRKLSNGSLPETSQTEAASKAPEQQCASQLPSAAGKSRKRLKSQ
EMCLQEHLPFLCPGGLRRRYCKDEIKTEDVSEEGPAEDTTEDVDVIGTDQVILAGFPALR
TAVS
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgatagccgagcccaacgcagccagtaaccttcccagccaaaaagagaatgccgttcat
gatgagactgtgcccgagcctgctgcgcagaatggcacctgtgtaagaaatggcaacctg
aaaacaccaagagagaagcggagggtccgagaacagtgtgaaaacataaggaggaattct
accagtagcagaagagtgagccagctgcagaatggtgaagtggttgaggcagtcaccttg
tttgaagtggttagcatggggaagcaggccatgcagtctgtagtagttgactgggttgaa
gcctataaacaagacaggaatgtggcacttctggatctcatcaacttcttcattcagtgc
tcaggctgtcaaggcatggtaacagcagagatgtttcaaagtttgtacaagaaggatgta
atgcgaaaaatgacagagacctttgataaggaaactgggttgcagtataagaaattcatg
gcctatccttggatcctgacagttacttggccagtggacatggacaatgaagactaccca
ctgatcagaacaggaccctattggaagaaattcaaggccaatttctgtgaattcattgca
gtgcttgtccagcagtgccagtgcagcatcctgtatgataactacttgatggacactctc
atctcactgcttacaggtttagcagattccatggtcagagcattcaggcacacaagcact
ttggcagcaatgaaacttctgacagcagttgtaagcgtccatctgaaccttgatgtcaac
aagcacaatgctcaaagattgtatgaggtggagaagaagaggataagtggcaagaggacc
agttacaggcttgatcagctagaaaggaaaaggaaagagtatgagcataagcttctagag
atacagcacatgatgaatgctattttcaaagggacatttttaaaccgttaccgtgatgtt
atccctgagatcagagcaacttgcattgaagaaattggctgctggattaaaacataccca
gatgcttttttgaatgatagctacttaaaatatgttgggtggatgctgtatgataagcaa
cctgaggtgcggttgaagtgtcttctgggactgcagggaatttatagcagaaaagaactt
gtttccaggatggatctctttactaatagattcaaggatcgaattgtgtccatgcctctg
gacaaggaccatgaagtagcagttcaagccatgaaactcttgatgcttatgtcacagaac
tgtgaggatgtgttatcagctgaagactgtgaaatgttataccagtttgtttataccact
caccgtccgcttgcagtagcagctggggaattcctttacaaaaggctgctttgccgtgag
ggagataaagaacttcagcccaaaggaggaggaaagcttggggccaacactgaccaactg
aaaagattaataaactttttcctggagagtgagctgcacaaacatgttgcatatctagtc
gacagcttgtgggactgggcaggcaaattcctgaaggactgggagtgcatgaccactctt
ctgttaaaaaatgctgaagtcggagaagcactgagcgatgccgaggaaagtgctctcatt
gaaatcatcctcgcaacagtccgagaagcagctgaaggtcatcctccagtgggcagaggt
gcagccaaaaaaattttgtcagtaaaagagaagaaaatccaattggaagattgtaccaaa
attactgaacactttattacggtgcttcctcagctcttggcaaagtattcaacagatgca
caaaaagtggcaaatcttctgcagattcctcagtattacgatttacatgtttacagtacg
ggacatctagagaagcatttggatgctttgctgagagagataaaagacattgtggccaag
cactccgacatgtctgtcctcgaggcttcctccaggacttatgatgtcctctgccgtgaa
gaaattgccatctatagccaggtggattgtgctcgaactcaaatgatagatgagttgatg
aaacagcttaaccagctactagattgcttctggcaaaaggaaggtggattttgtacggat
gcaggagaaatttcccggatgcactctacgttgagaagaatagcggcttttcataatgcc
catgatctcaccaagtggagtctgtatgacaagactttaaggttcctggtgtttgaaatg
gaacatggcagtttgcctgttctgattatcctaccagctctccagtgcacatatttttct
ctcctgtggcaactagctgcagtttcggaaaattctcccaaggagactctttttctacta
agaagggagctgggacgtttcagtcagatttgcacatgcttcctccaccataaggaaaga
gatgtaagagaaaaggccttcatgatactctgtgactggttgctgattttgagtcacctg
gattcaaataataatgaagaaacagttggacttctaggttatcttcctaacacatcactt
caggaaaaactcttctcatttatccaggaacacatttttatggatgaagaaaaggaaaaa
gaagatgtgacagaagaggaaaaggatgaaacttgcagacttgatgacttgcacgaaaag
cggcgtcttctggcagcatattgcaagttaatagtgtataatgtggttgacatgactgca
gccgctgagatctataagtattatgtgaagacctacagtgattttggagacataattaaa
gaaacgttaagcaagacgaggtacaataacaaaattcagagtgccaagacactgattctc
tgtctgcagcagctgttccagacacttgtagaaagccaagacagcagtagtggtgtggac
tactcctctccttcctttgcaaacatcaaagaacttgctcgtcgcttttcactgacattt
ggctgggaccaagtgaaatctagagaatctatagccatgatacacaaggaagggattgaa
tttgcttttcacggagctactggagtagatggaaaatgcttgcctcctaacttgagcttt
ctgttaatcatcagtgaattttccaacaagctgctaaagccagacaaaagactagtgtac
agttacttacagaggtacataacagagccactgtcctgcagaggagatgaatggcagccc
ttggtctggtacagaaactctttactggcaaatgaagatgaggagagctctgtccttggc
agcttgggagagtgggcccctatgggctcatctaagacatcttcttttaaaaggaaattg
tctaatgggtctttgcctgaaaccagccagactgaagcagcaagtaaagccccagaacag
cagtgtgcttcccagcttccctctgcagcagggaaaagcagaaagaggctgaaatctcag
gagatgtgcttgcaggaacatttgccattcctttgcccaggagggctgcgtagaagatac
tgcaaagatgagattaagacggaagatgtctctgaggaaggtccagcagaagacacgact
gaagatgttgatgtcattggtacagaccaggtaattctggctggttttccagctctgagg
acagctgtaagttga
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