Hirundo rustica (Barn swallow): 120747829
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Entry
120747829 CDS
T09369
Symbol
SAMD4B
Name
(RefSeq) LOW QUALITY PROTEIN: protein Smaug homolog 2
KO
K27396
protein Smaug
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120747829 (SAMD4B)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
120747829 (SAMD4B)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
PHAT
SAM_2
Motif
Other DBs
NCBI-GeneID:
120747829
NCBI-ProteinID:
XP_039909803
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All DBs
Position
39
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AA seq
639 aa
AA seq
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MMFRDQVGIVAGWFRGWSECEQTVALLALLKRVTRTQARFLQLCLEHSLADCPDIHLLEA
EANSAAAISQWPQEPAEAAVALLLAHLPLLQPGNAAAKAEYMKRLQKVLADAIESNRCVE
ESRQLLSYALIHPATTADDRSALALWLGHLEERLXPRPAPRPRSAAPPPHEWPPEPPEPG
GGAWAEQGAPGTAPRENGHPPFQPPGALPCQLHPSPVKRSLALVPGSPQPGPGGDWAGSG
GPEEPPAAPRGPPPPFGDHAPLSPQSSVASSGSEHTEEPGGRNSFQEDGSGMKDVPLWLK
SLRLHKYAALFAQMSYEEMMTLTEHHLESQNVTKGARHKIALSIQKLRERQSVLRALEKD
ILEGGNLWTALQELQQILVTPIKAFRPPPGRAPAXPGPPDGAPPDPEAPAAPVPDGDIPG
QFTRVMGKVCTQLLVSRPDEENITSYLQLLEKCLSHEAFTETQKKRLQSWKQQVLKLLRA
FPKKGPLDGPPGYRPPKSWAFGSNSLPIAGSVGGGXAGGGGRPFALPPRALPPPARLGLL
GPPGGAPAPRAPLGAPPLGTQGRQSLWFGAGGGAGGSPGSRGAVQRTHSLPVHSSALLAF
PQECPPPGTDLEINPTLESLCLSMTEHALGDGTDKTSTI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgatgttccgggaccaggtggggatcgtggccggctggttccggggctggagcgagtgc
gagcagacggtggcactgctggcgctgctcaagcgcgtcacccgcacccaggcccgcttc
ctgcagctctgcctcgagcactcgctggccgactgccccgacatccacctgctcgaggcc
gaggccaacagcgccgccgccatctcgcagtggccccaggagcccgccgaggccgccgtg
gccctgctgctggcccacctgccgctgctgcagccgggcaacgcggcggccaaggcggag
tacatgaagcggctgcagaaggtgctggcggacgccatcgagagcaatcggtgcgtggag
gagtcgcggcagctgctgtcgtacgcgctcatccaccccgccaccacggccgacgaccgc
agcgcgctggccctgtggctcggacacctggaggagcgcctgnngccccgcccggccccg
cgcccccgcagcgccgcccccccgccccacgagtggccccccgagccccccgagcccggc
gggggggcgtgggcagagcagggagccccgggcacggccccccgggagaacggacacccc
ccgttccagccccccggagccctgccgtgccagctgcaccccagccccgtgaagcgctcg
ctggcgctggtgcccggcagcccccagcccggcccgggtggggactgggcggggtcgggg
gggcccgaggagccccccgcggccccccgcgggccccccccgcccttcggggaccacgcg
ccgctgtccccgcagagcagcgtggcctcgtcgggcagcgagcacaccgaggagcccggc
ggccgcaactccttccaggaggacggcagcggcatgaaggacgtccccctgtggctgaag
agcctgcggctgcacaagtacgcggcgctgttcgcgcagatgagctacgaggagatgatg
acgctgacagagcatcacctggagtcacagaacgtcaccaagggcgcgcggcacaagatc
gccctgagcatccaaaagctgcgggagcggcagagcgtcctcagggcgctggagaaggac
atcctcgaggggggcaacctgtggacggctctgcaggagctgcagcagatcctggtgacc
cccatcaaggccttccggcccccccccggccgcgcccccgccnnccccgggccccccgac
ggggccccccctgaccccgaggcccccgcggcgcccgtccccgacggggacatcccggga
cagttcacgcgtgtcatgggcaaggtgtgcacccagctcctggtgtcgcggccggacgag
gagaacatcaccagttacctccagctgctcgagaagtgcctgagccatgaggcgttcacg
gagacgcagaagaagcggctccagtcctggaagcagcaggtgctgaagctgctccgcgcc
ttccccaagaaggggcccctggacggcccccccggataccggccccccaaaagctgggcc
ttcggctccaactccctccccatagctggctctgtggggggggggncggcgggggggggg
ggccgccccttcgcgctgcccccccgggccctgcccccccccgcccgcctggggctgctg
ggaccccccgggggggcccccgcccccagagcccccctcggagccccccccttgggcacg
cagggacggcagagcctttggttcggggccggggggggcgcgggggggtcccccgggagc
cgcggggccgtgcagagaacgcactcgctgcccgtgcacagctcggccctgctcgccttc
ccgcaggagtgtccgccccccgggacggacctggagatcaaccccacgctggagtcgctg
tgtctgagcatgaccgagcacgcgctgggggatggcacagacaaaacctccaccatctga
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