KEGG   Hirundo rustica (Barn swallow): 120747997
Entry
120747997         CDS       T09369                                 
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
  KO
K08131  collagen type IX alpha
Organism
hrt  Hirundo rustica (Barn swallow)
Pathway
hrt04510  Focal adhesion
hrt04512  ECM-receptor interaction
hrt04518  Integrin signaling
hrt04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:hrt00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    120747997 (COL9A2)
   04518 Integrin signaling
    120747997 (COL9A2)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    120747997 (COL9A2)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    120747997 (COL9A2)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:hrt00535]
    120747997 (COL9A2)
Proteoglycans [BR:hrt00535]
 Extracellular matrix (ECM) proteoglycans
  Others
   120747997 (COL9A2)
SSDB
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 120747997
NCBI-ProteinID: XP_039909997
LinkDB
Position
Unknown
AA seq 499 aa
GHRGRPGALGEPGKQGEPGPKGDVGASGEQGVPGPPGPQGLRGYPGTAGPKGETGPAGYK
GMVGSIGAAGRPGREGPKGPPGDPGDKGELGGRGIRGPQGDIGPKGENGLPGIDGKDGTP
GIPGLKGGMGQAGHPGTPGHRGQAGLPGQPGSKGGPGDKGEAGPRGHPGVTGAPGQLGEP
GPRGEQGPQGVPGLKGDRGERGLVGTPGEQGRAGPKGEQGPPGIPGAQGLPGVKGDKGSP
GKTGPKGSIGDPGVHGLAGLKGEKGESGEPGPKGQQGIQGDLGFPGPSGDAGAPGIRGYP
GPPGPRGLLGERGVPGMPGPRGTAGRDAGDQHIVDVVLKMLQEQLAEVAVSARRAALGGV
GAVGPPGPPGPPGPPGEQGPHGPMGPRGVPGILGAAGQIGNVGPKGKRGEKGERGEVGRG
HPGMPGPPGIPGLPGVPGHALDGKAGERGVPGAPGEAGKPGLPGPAGFPGFCEPAACLGA
SAYAAARLTEPGGVKGPVY
NT seq 1500 nt   +upstreamnt  +downstreamnt
ggacacagaggccgccccggagccctcggagagcccggcaagcagggagagccgggcccc
aagggagacgtcggtgcctctggagaacaaggagtcccaggccctccgggacctcagggc
ctcaggggttatcctggcacggcaggacccaagggtgagacgggtcccgctggctacaag
ggcatggtcggcagcatcggagcagccgggcggccgggcagggaaggccccaagggacca
cctggggaccctggtgacaagggagagctgggtggccgtggcatcaggggaccccagggt
gacatcggccccaagggggagaacggtctcccgggcatcgatggcaaggatggcaccccg
gggatcccgggactgaagggtggcatgggacaggccggacacccgggaacgccgggacac
cggggacaagctggattgccgggccagccgggaagcaaaggtggcccaggtgacaagggt
gaagcgggtcctcggggccaccccggtgtcaccggtgccccagggcagcttggcgagccc
ggacctcggggcgagcagggcccgcagggtgtccccgggctgaagggtgacaggggcgag
cgtggcctcgtggggacccccggcgagcagggcagagcgggcccaaagggagagcagggc
ccaccaggcatcccaggagcccaaggcttgcctggagtcaaaggagacaagggctctcca
gggaaaactggccccaaaggcagcattggagatcccggtgtccacggcctggcagggctc
aagggagagaagggggaatcaggagagccgggacccaagggacagcaaggcatccaggga
gacctcggctttcccggcccctcgggggatgcaggagcaccgggaattcggggctatccc
ggcccgcccggccctcgggggctgctgggggagcgcggagtgccgggaatgccgggcccg
aggggcacagccggccgggacgctggggaccagcacatcgtggacgtggtgctgaagatg
ctgcaagagcagctggcagaggtggccgtgagcgccaggagagccgccctgggcggggtc
ggggccgtgggaccccccgggccccccgggccccccggcccccccggtgagcagggtccc
cacggccccatgggaccccgaggcgtccccggaatcctgggagctgccgggcagatcggg
aatgtcggacccaaagggaagagaggagagaagggcgagcggggagaagttggccgtggc
cacccgggaatgccgggtcctccagggatcccaggcctcccgggcgttcccggccacgct
ctggatggcaaagcgggcgagcggggcgtgccgggcgccccgggcgaggccgggaagccg
ggattgccgggccccgcgggattcccgggattctgcgagccggccgcgtgcctgggagcc
tcggcctacgcggccgcgcgcctcacggagccggggggcgtcaagggccccgtgtactga

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