Hirundo rustica (Barn swallow): 120747997
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Entry
120747997 CDS
T09369
Symbol
COL9A2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04510
Focal adhesion
hrt04512
ECM-receptor interaction
hrt04518
Integrin signaling
hrt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120747997 (COL9A2)
04518 Integrin signaling
120747997 (COL9A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120747997 (COL9A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120747997 (COL9A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hrt00535
]
120747997 (COL9A2)
Proteoglycans [BR:
hrt00535
]
Extracellular matrix (ECM) proteoglycans
Others
120747997 (COL9A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
120747997
NCBI-ProteinID:
XP_039909997
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
GHRGRPGALGEPGKQGEPGPKGDVGASGEQGVPGPPGPQGLRGYPGTAGPKGETGPAGYK
GMVGSIGAAGRPGREGPKGPPGDPGDKGELGGRGIRGPQGDIGPKGENGLPGIDGKDGTP
GIPGLKGGMGQAGHPGTPGHRGQAGLPGQPGSKGGPGDKGEAGPRGHPGVTGAPGQLGEP
GPRGEQGPQGVPGLKGDRGERGLVGTPGEQGRAGPKGEQGPPGIPGAQGLPGVKGDKGSP
GKTGPKGSIGDPGVHGLAGLKGEKGESGEPGPKGQQGIQGDLGFPGPSGDAGAPGIRGYP
GPPGPRGLLGERGVPGMPGPRGTAGRDAGDQHIVDVVLKMLQEQLAEVAVSARRAALGGV
GAVGPPGPPGPPGPPGEQGPHGPMGPRGVPGILGAAGQIGNVGPKGKRGEKGERGEVGRG
HPGMPGPPGIPGLPGVPGHALDGKAGERGVPGAPGEAGKPGLPGPAGFPGFCEPAACLGA
SAYAAARLTEPGGVKGPVY
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
ggacacagaggccgccccggagccctcggagagcccggcaagcagggagagccgggcccc
aagggagacgtcggtgcctctggagaacaaggagtcccaggccctccgggacctcagggc
ctcaggggttatcctggcacggcaggacccaagggtgagacgggtcccgctggctacaag
ggcatggtcggcagcatcggagcagccgggcggccgggcagggaaggccccaagggacca
cctggggaccctggtgacaagggagagctgggtggccgtggcatcaggggaccccagggt
gacatcggccccaagggggagaacggtctcccgggcatcgatggcaaggatggcaccccg
gggatcccgggactgaagggtggcatgggacaggccggacacccgggaacgccgggacac
cggggacaagctggattgccgggccagccgggaagcaaaggtggcccaggtgacaagggt
gaagcgggtcctcggggccaccccggtgtcaccggtgccccagggcagcttggcgagccc
ggacctcggggcgagcagggcccgcagggtgtccccgggctgaagggtgacaggggcgag
cgtggcctcgtggggacccccggcgagcagggcagagcgggcccaaagggagagcagggc
ccaccaggcatcccaggagcccaaggcttgcctggagtcaaaggagacaagggctctcca
gggaaaactggccccaaaggcagcattggagatcccggtgtccacggcctggcagggctc
aagggagagaagggggaatcaggagagccgggacccaagggacagcaaggcatccaggga
gacctcggctttcccggcccctcgggggatgcaggagcaccgggaattcggggctatccc
ggcccgcccggccctcgggggctgctgggggagcgcggagtgccgggaatgccgggcccg
aggggcacagccggccgggacgctggggaccagcacatcgtggacgtggtgctgaagatg
ctgcaagagcagctggcagaggtggccgtgagcgccaggagagccgccctgggcggggtc
ggggccgtgggaccccccgggccccccgggccccccggcccccccggtgagcagggtccc
cacggccccatgggaccccgaggcgtccccggaatcctgggagctgccgggcagatcggg
aatgtcggacccaaagggaagagaggagagaagggcgagcggggagaagttggccgtggc
cacccgggaatgccgggtcctccagggatcccaggcctcccgggcgttcccggccacgct
ctggatggcaaagcgggcgagcggggcgtgccgggcgccccgggcgaggccgggaagccg
ggattgccgggccccgcgggattcccgggattctgcgagccggccgcgtgcctgggagcc
tcggcctacgcggccgcgcgcctcacggagccggggggcgtcaagggccccgtgtactga
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