Hirundo rustica (Barn swallow): 120748014
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Entry
120748014 CDS
T09369
Symbol
ERCC1
Name
(RefSeq) DNA excision repair protein ERCC-1
KO
K10849
DNA excision repair protein ERCC-1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03420
Nucleotide excision repair
hrt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120748014 (ERCC1)
03460 Fanconi anemia pathway
120748014 (ERCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrt03400
]
120748014 (ERCC1)
DNA repair and recombination proteins [BR:
hrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
120748014 (ERCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rad10
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-GeneID:
120748014
NCBI-ProteinID:
XP_039910019
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MDPDPNPGAATDPEPAAEPAAAGKRRRFTLRQEGPDEPPVPSLFRASGAAPRPGPVPGPV
PVPIPPGSGSYAEFVVRGSGGAGKEPRGTTGTHGGQDRDQGQNRDRDQNRDRDQNQNRAR
DQNRERDQNRERDQNRDQEQNQNRDQDPGATGTAPSGSIPTPGDRDQNQEQNRAREVPAL
PVLKPGTKSSSIIVSPRQRGNPVLRFIRNVPWEFGDVVPDYVLGQSSCALFLSLRYHHLN
PDYIHERLRALGRSFGLQVLLLQVDVRDPHQSLKDLAKVCLLTDCTLLLAWSPEEAARYL
ETFKAYEQKPPDLLKERLEHDFLSRVTECLTSVKSVNRTDALSLLGTFGSLAAVAGASRE
DLSLCPGVGPQKAKRLFDVLHEPFLKTPR
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atggacccggacccgaatcccggagccgccaccgacccggaaccggcagcggaaccggca
gcggcggggaagcggcggcgtttcacgctccggcaggagggtcccgacgaacccccggtc
ccgtcgctgttcagagcctccggggccgcgccccgcccggggccggtgccggggccggtg
ccggttccgatcccacccggttccggttcttacgccgagttcgtggtgcggggatcgggg
ggcgccgggaaggagccgcggggaaccacggggacccacggggggcaggaccgggaccag
ggtcagaaccgggaccgggatcagaaccgggacagggatcagaaccagaaccgggccagg
gatcagaaccgggaacgggatcagaaccgggaacgggatcagaaccgggatcaggaacag
aaccagaaccgggatcaggatcccggagccaccggaaccgccccctcgggatccatcccg
acccccggggaccgggatcagaaccaggagcagaaccgggcccgggaggttccggccctg
cccgtgctcaaaccgggcaccaagagcagcagcatcatcgtcagcccgcggcagcgcggc
aatccggtgctgaggttcatccgcaacgtcccctgggagttcggggacgtcgtccccgac
tacgtcctgggccagagcagctgcgcgctcttcctcagtctcaggtatcaccacctgaac
cccgattacatccacgagcggctccgggctctggggcggagcttcggcctccaggtgctg
ctgctgcaggtggacgtgcgtgacccccaccagtctctcaaggacctggccaaggtttgt
ctcctcaccgactgcaccttgctgctggcctggagccccgaggaggccgccaggtacctg
gagaccttcaaagcctatgagcagaaacccccggacctgctcaaggagcgcctggagcac
gacttcctctcacgggtgacagagtgcctgaccagcgtcaagtccgtgaacagaacggac
gccctgagcctgctgggcaccttcgggtcgctggcggccgtggcgggcgcgtcccgggag
gatttgtccctctgtcccggcgtgggaccccaaaaggccaagcgactcttcgacgtcctg
cacgagcctttcctcaagacccctcggtga
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