Hirundo rustica (Barn swallow): 120748028
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Entry
120748028 CDS
T09369
Symbol
APEX1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120748028 (APEX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrt03400
]
120748028 (APEX1)
Enzymes [BR:
hrt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
120748028 (APEX1)
DNA repair and recombination proteins [BR:
hrt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
120748028 (APEX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
120748028
NCBI-ProteinID:
XP_039910037
LinkDB
All DBs
Position
Unknown
AA seq
305 aa
AA seq
DB search
MPKRGKKKEESGSGDEAGPGPAKAAKAAPAPMYEDPPTREATPEGRRWTLKVSSWNVDGL
RAWVRKGGAQWVQEEAPDVLCLQETKCAVSAVPAEIRALPGLPHQFWSSAKDRPGYSGVG
LLAKTEPLNVTYGIGDPEHDVDGRVVTAEFPSLFVVSAYVPNAGRGLVRLEPRLRFDAAF
LAFLQRLDERKPVLLCGDLNVAHQEIDLCHPRVNRANPGFTPQEREGFSRLLAAGFVDSF
RHLYPEARGAYTFWTYLGGARARNVGWRLDYAVLSRRLLGALCDSKIRNAVAGSDHCPIT
ALLAV
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagcgcgggaagaagaaggaggagagcggcagcggggatgaggctgggcctggc
ccagcgaaggcggccaaggcagcgccagccccgatgtatgaggacccgcccacccgcgag
gccacgcccgaggggcggcgctggaccctcaaggtgtcgtcgtggaacgtggacgggctg
cgggcctgggtgcgcaagggcggggcccagtgggtgcaggaggaggccccggatgtgctg
tgcctgcaggagaccaagtgcgcggtgtcggccgtgcccgccgagatccgggcgctgccg
gggctcccgcaccagttctggtccagcgccaaggaccggccgggctacagcggcgtgggg
ctgctggccaagaccgagcccctcaacgtcacctacggcatcggtgaccctgagcacgac
gtcgacggccgcgtggtgacggccgagttcccgtctctcttcgtggtctcggcctacgtc
cccaacgccgggcggggcctggtgcgcctggagccgcggctgcgcttcgacgccgccttc
ctggccttcctgcagcgcctggacgagcggaagccggtgctgctctgcggcgacctcaac
gtggcgcaccaggagatcgacctgtgccacccgcgcgtcaaccgcgccaaccccggcttc
acgccgcaggagcgcgagggcttctcgcgcctgctggccgccggcttcgtcgactccttc
cggcacctgtaccccgaggcgcgcggcgcctacaccttctggacctacctgggcggcgcc
cgcgcccgcaacgtgggctggcggctcgactacgccgtgctgtcgcggcggctgctgggc
gccctgtgcgactccaagatccgcaacgccgtggccggcagcgaccactgccccatcacc
gccctgctcgctgtctag
DBGET
integrated database retrieval system
