Hirundo rustica (Barn swallow): 120748077
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Entry
120748077 CDS
T09369
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120748077 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120748077 (SPATA13)
Membrane trafficking [BR:
hrt04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120748077 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
PH_5
Motif
Other DBs
NCBI-GeneID:
120748077
NCBI-ProteinID:
XP_039910091
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All DBs
Position
2:complement(46488516..46636621)
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AA seq
1352 aa
AA seq
DB search
MFRVTFNVVTEKVTFTLAACPSATWKAAPPEELSSPSRCEGKANQGAADEGEAARSADGD
SSVALSYPSLCLHAYSIENMTTFPNGCGNGTTVTCIVMDNKEPQHQTTCASHNGGHNTSN
GLEEEFQEDKLSPSKIMRFFTTPRKRANSSSDRPRSLVLMGNSSTWNAFSSIRKMGSFKK
LKSSGQQGIQTRECSDILNENSIGKHGSNGAVVRVQNNRYSYSGPLHDVQNAVDGLASDC
SDVEESDESFLRNTHRSRSIRRAYGAGRINLLDADKVQSRHNCARPASPVITEPKICEIL
VKDSGNNRIIYWRSKSSDNLNFLKKSSFKRKSTSNLADLKVANEKQMPARTVSVASADSD
KSGGNPERRSKRWKSPIRAKDFDRVLKLVSNVTDVARKKDGPKTMAPSPSELSQRTRSNS
RLHDDYSRRVSSSTDHDRKRCASSVSSPDSSLPGTPCLQSPVIAQDKEAEMHVAVTEDKS
LRTSSGIPNSDSFSPTLSDVSPFPNEVFYSDSDEPKATQQCTDEAENLHVPVRPTTPKPQ
SPTAGKVKCSMDFQCPNHHSTLSLSSSESEERVEVPGLKLGRNPVCFQDSVQTVYYDDGN
EDSGISSHSQLSLNLASGTEEKKEEVVSDDHWKRSTSQDEEKADSQKVTSRKWGSGKRSR
PRPLSDYGQMLIRSFSIPEDAVAVESQKTDCTDGDNQPGLAPVGSVIQSNTVGCHRGRKR
RPISVIGGVNFYGDDQVEERENLLTQPVARPPVPAHKVPPYKAVSARFRPLTFSQSTPIG
LDRVGRRRQMRTSNVAADGGTESSALVDDNGSEEDYSYEELCQAAPRYLQPGGEQLAINE
LISDGTVVYAEALWDHVTMDDQELGFKAGDVIRVLEASNKDWWWGRNEDKEAWFPASFVR
LRVNQEEVPENCSNIQDEEQDPDISKHRQKIAENRDQMRTNVIQEIMKTERVYIKHLKDI
CEGYIRQCRKHTGMFTTAQLSTIFGNIEDIYKFQRKFLKDLEKQYNKEEPHLSEIGSCFL
QHQEGFAIYSEYCNNHPSACIELSKLMKQGKYRHFFEACRLLQQMIDIAIDGFLLTPVQK
ICKYPLQLAELLKYTTQEHSDYGNIKAAYEAMKNVACLINERKRRLESIDKIARWQVSIV
DWEGPDVLARSSELIHSGELTKISKQGKSQQRTFFLFDHQLVFCKKDLLRRDILYYKDRI
DMDEMEIVDTEDGRDKDFNISVKNAFKIINRTTEEIHLFCAKKQEDKKRWMEACESERRR
VREDKEMGMEISENQKKQAMQNARKSRQGKIKGVSYNGCPVPPPHQTLHPLHQRHITVPT
SIPQQQVFALAEPKRKPSLFWHTFNKLTPFKK
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtgtcaccttcaatgtagtgacagagaaagtaaccttcaccttggcagcctgt
ccctccgccacatggaaggcagcgccgcctgaggagctcagctcacccagtcgatgtgaa
ggcaaggcaaaccaaggtgcagccgatgaaggggaggcagcgaggtcagctgatggagac
agcagtgttgctttgagctaccccagcctctgccttcatgcctacagcatcgagaacatg
acaacgtttccgaatggctgtggaaatggcaccaccgttacttgtatagttatggataat
aaagagccccaacaccagactacctgcgccagtcataatgggggacacaacaccagcaac
ggtcttgaggaggaatttcaagaggataagctcagcccttccaaaatcatgcgctttttc
accacccctaggaaacgggctaattccagctctgacaggcctcgttctctggttttgatg
ggcaactcatccacgtggaatgccttttcttctatcagaaagatgggatctttcaagaag
ttgaaatcttcaggtcaacaaggaattcaaacaagggaatgctcagatatcttaaatgaa
aacagcataggcaaacatggttcaaatggagcagtggtgagagttcagaataacaggtat
tcgtattcggggcctctacatgatgttcagaatgcagtggatggtttagcttctgactgc
tctgatgtggaggagagtgatgagtccttcctgagaaacactcatcgctcacgcagcatc
aggcgggcttacggtgctggccgcataaacttgctagacgcagataaagttcagagtcgc
cacaactgtgctaggccagcatcacctgtcatcacagagccaaagatctgtgaaattttg
gtgaaagactctggaaacaacaggatcatttattggcgaagcaaaagttcagataatttg
aactttctgaagaagagctcattcaaacggaaatccacctcaaaccttgctgatctgaag
gttgcaaatgaaaaacagatgccagcaaggactgtgagtgttgcttctgctgactccgac
aaaagtggtggaaaccctgagaggagatccaagcgatggaagagccctatcagagcaaag
gattttgaccgagttttgaaacttgtcagtaatgttacggatgttgcaaggaagaaggat
ggccccaagaccatggctccttctcccagtgagctgtcccagagaacaaggtcaaacagc
aggctgcatgatgactactcccgcagggtttccagcagcacagatcatgataggaagaga
tgcgcctcctcggtatccagtccagactcttccttgccgggaacaccttgcctgcagagc
cctgtgattgctcaggataaagaggctgaaatgcatgtagctgtcactgaagataaaagc
ctcaggacgtcatcaggtatcccaaactctgatagcttttcacctactctgagcgacgtt
agtccgtttcccaatgaagtcttttattcggactctgatgaaccaaaagctacccagcag
tgtacagatgaagctgaaaaccttcatgttccggtcaggccaactactccaaagcctcaa
agtccaactgcagggaaggtcaagtgcagtatggatttccagtgtccaaaccatcacagc
acattgtcactgagctcatcggagagcgaggagagagttgaggtaccagggctgaagttg
ggcaggaatcctgtttgcttccaggactcagtgcaaactgtgtactatgatgatggaaat
gaagacagtggcattagcagccactctcagctaagtctcaatttagcctctggtactgag
gagaaaaaagaagaggttgtttctgatgaccactggaagcggtccacatcccaggatgaa
gaaaaggcagactcacaaaaggtcacatccaggaaatggggctctggaaaaagatcccgg
cccagacctctctcagactatggccaaatgttgatccgaagtttctctataccagaagat
gcagttgcagtggagtctcagaaaacagactgcacagatggagacaatcagccaggactg
gcacctgttgggtctgtgatccaaagcaatactgtaggctgccacagagggcgaaaaaga
agacccatctccgtaataggtggggtcaatttctatggagacgatcaagtagaagagaga
gaaaatctgctgacacaacctgtggcacggccacctgttccagcacacaaggtgccgccg
tacaaggctgtttcagccaggttccggccgctcaccttctcacaaagtacccccatcggc
ctggaccgggtgggacggaggcggcagatgagaacatctaatgttgctgcagatggtggg
actgaatcttcagccttagtggatgacaatggcagtgaggaagattacagctatgaggag
ctctgccaagctgctcccaggtacctgcagcctggaggggaacagctagcaattaatgag
ctgataagcgatggcaccgtcgtctatgcggaggctctctgggaccatgtcactatggat
gatcaagagttgggcttcaaagctggagatgtcattagagttctagaagcttctaacaaa
gactggtggtggggaagaaatgaggacaaggaggcctggtttccagctagctttgtcagg
ctgcgagttaatcaggaagaagtgccagaaaattgtagtaatatccaggacgaagaacaa
gatccagatattagcaagcatcgccagaaaatagctgaaaacagggatcagatgagaacc
aacgttatacaggaaatcatgaagacagaacgagtctatatcaagcacctcaaggacatc
tgtgagggttacattcggcagtgtcgcaaacatacaggaatgttcaccacagctcagtta
agcaccatttttggaaatattgaagatatttacaagttccaaaggaagtttctgaaggat
cttgagaagcagtacaacaaggaggaacctcatctaagtgaaatagggtcatgttttctt
caacatcaagaaggctttgctatttattcagagtattgtaacaatcatcccagtgcctgc
attgagctctccaaactgatgaagcagggcaaataccgccacttctttgaggcctgtcgc
ttgcttcagcagatgattgacattgccattgatggttttcttctcacgcctgttcagaag
atctgcaaatatcctctgcagctcgcagaattgctcaaatacaccactcaggagcacagt
gattatggcaacataaaagctgcatatgaggccatgaagaacgtggcatgcctgatcaac
gagcgaaaacggagactagaaagcatagacaagattgcgcgttggcaagtttctatcgta
gactgggagggaccagatgtcctagccagaagctcagaactgatccactcaggagaactg
accaaaatatcaaaacaaggcaaaagccagcagcggactttcttcctttttgatcatcag
cttgtcttctgtaagaaggacttgctgagaagggacatcttgtattacaaggatcgtatt
gacatggacgagatggaaattgtggacactgaagatggcagagacaaagattttaacatc
agtgtcaagaatgcttttaagataataaacagaacaacagaagagattcatttgttctgt
gcaaaaaaacaggaggataaaaagagatggatggaggcgtgtgaaagtgaacggagaaga
gttcgagaagacaaggaaatgggtatggaaatctcagaaaaccagaagaaacaagccatg
cagaacgctcgtaagtcaaggcaaggaaaaattaaaggtgtgagctataatggctgtcct
gtgcctcctccacaccaaaccctgcatccccttcaccagcgacacatcaccgtgcctacc
agcatcccacagcagcaggtctttgccttggcagagcccaagaggaagccatccctcttc
tggcataccttcaacaaactcactccctttaaaaagtga
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