Hirundo rustica (Barn swallow): 120748141
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Entry
120748141 CDS
T09369
Symbol
CLSTN3
Name
(RefSeq) calsyntenin-3
KO
K22661
calsyntenin 3
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrt04515
]
120748141 (CLSTN3)
Cell adhesion molecules [BR:
hrt04515
]
Cadherins
Cadherin related
120748141 (CLSTN3)
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
SMN_G2-BD
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
120748141
NCBI-ProteinID:
XP_039910146
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All DBs
Position
2:28825548..28840875
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AA seq
976 aa
AA seq
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MGDPRPRAAVLLPLLCLCAALPGSASNKANKHKPWIEAEYQGIVMENDNTVLLNPPLFAL
DKDAPLRYAGEICGFRIHGSGVPFEAVILDKATGEGLIRAKEPVDCEAHKEHTFTIQAYD
CGEGPDGANTKKSHKATVHVRVNDVNEFAPVFVEKLYRVAVTEGKLYDRILRVEAIDGDC
SPQYSQICYYEILTPNIPFLIDNDGNIENTEKLQYSADRVYKFRVTAYDCGKKRASDDAE
VEIQVKPTCKPSWQGWNKRIEYTPGAGSLALFPTIHLETCDEPLWNIQATVELQTNHVAK
GCDRDNYSEKSLRKLCGAASGEIDLLPVPSPTANWTARLSVHYSQDSSLIYWFNGSQAAQ
VPVVKGPNGHEGLSDHFTLSVWMKHAVVPGKGRREEETVICSTVQSEDGYSHYSLAVHGC
RISFLYWPLLESARPVKFLWKLEQVCDDEWHHYALNLEFPTVTLYVDGVSYDPALIHDNG
LIHPPRPEPSLLIGACWAEERNKEKTGGSENATDAVQGDPLSIHHYFHGYLAGFTVRPGS
LESREVIECLYACREGLDYSDFDSLGKGMKVHVNPSQSLLTLEGDDVETFNHAIQHVAYM
NSLRFATPGVRPLRLTTAVKCFSEESCVSIPDVEGYVVVLQPDAPQILLSGNAHFAHPAS
DFEAPEGIPLFPNLQITCSISHQVEAKKDESWHGTVTDTRMSDEIVHNLDGCEISLVGDD
LDPEREYLLLDGALLQQRGLELANTSAYLTITGVESIAVYEEILRQVSYHINHGAALYER
KFHLSCTEMNGRYSSNEFTVEVNVLHNMNRAAHPNHILNSQQFVHRGHHLPAELSGHSLA
STHSNPMVPSAATVIIVVCVGFLALMVILGILRIHSLHRRGVGQEVPGAAVSGHTSTGGK
ESDMFWDDSALTIIVNPMESYQSCQERAAGSVEGRAGEGMEDDDDDSTDSETPDSPDSSD
MNDRHIIGKSDVSHRY
NT seq
2931 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaccctcggccccgcgccgccgtcctcctccctctgctctgcctctgcgccgcg
ctgcccggcagcgcctccaacaaagcaaacaagcacaaaccatggattgaagccgagtat
cagggcatcgtcatggagaatgacaacaccgtcctgctcaacccgccactgttcgcgctg
gacaaagatgccccactgcgctatgcaggtgaaatctgtggcttcaggatccatggatcg
ggggtaccttttgaagctgtgatcctggacaaagccacaggagaggggctgatccgggcc
aaggaaccagtggattgtgaagcgcataaggaacacacatttaccatccaggcctacgac
tgtggagagggacctgatggagcaaataccaaaaaatcacacaaggccacggtgcacgtt
cgagtaaacgatgtgaatgagtttgctccggtctttgtggagaagctgtaccgcgtggcg
gtgacggagggaaagctgtacgaccgcatcttgcgtgtggaggccatcgacggggactgc
tcaccgcagtacagccagatctgctactacgagatcctgaccccgaatattcccttcctc
attgacaatgacgggaacatcgagaacacggagaagctgcagtacagtgcggatcgtgtc
tacaaattcagagtgacagcctatgactgtggaaagaagagggcttctgatgatgctgaa
gtggaaatccaggtgaaacccacctgcaagcccagctggcagggctggaacaagaggatt
gagtacacccccggtgcaggcagcctcgcgctcttccccaccatccacctggagacctgt
gatgagccgctgtggaacatccaggccacggtggagctgcagacaaaccacgtggccaag
ggctgtgaccgggataactactccgagaagtcgctgcgcaaactctgtggagctgcctca
ggagagattgacctgctgcccgtgcctagccccactgcaaactggacggcgcggctctcg
gtgcactacagccaggacagcagcctcatctactggttcaatggcagccaggctgcccag
gtgcccgtggtgaagggaccgaacggccacgaggggctgagtgaccacttcaccctgtcc
gtgtggatgaagcatgccgtggtgcccggcaaaggcaggcgggaagaggagacggtgatc
tgcagtacagtgcagagcgaggacggctactcccactactctctggccgtgcacggctgc
cggatttctttcctctactggccgttgctggaaagcgcaaggcctgtgaaattcctctgg
aagctcgagcaggtctgcgacgacgagtggcaccattacgccctcaacctggagttcccc
acggtcacgctgtacgtggacggcgtctcttacgaccccgccctgatccacgacaacggc
ctcatccacccgccgcggcccgagccttccctcctgatcggggcctgctgggccgaggaa
agaaacaaagagaaaaccggaggaagcgagaacgccactgatgctgtgcaaggagatcct
ctgtcgatacaccactacttccatggttacttggctggcttcactgtgcgccctggtagc
ttggagagccgggaggttattgaatgcctgtatgcctgccgtgaggggcttgattacagt
gacttcgacagtctgggcaaagggatgaaggttcatgtgaacccctctcagtccctgctc
accttggagggtgacgatgtggaaaccttcaaccacgcaatccagcacgtggcttacatg
aattcactgcgctttgctacccctggggtccggccactcaggctcaccactgccgtcaag
tgtttcagtgaggagtcctgtgtctccattcctgatgtggaaggctatgttgtggtgcta
cagcctgatgccccccagatcctgctgagtggcaatgcccactttgctcatcctgcgtca
gactttgaggctccggaaggaattcccctgttccccaacctccagatcacctgctctatt
tctcaccaggtggaggccaagaaggatgagagctggcatggtaccgtgacagacacacga
atgtcagatgagatcgtgcacaacctggacggctgcgagatctcattggtaggagatgac
ttggacccagagagggaatacctgctcctggatggggcactgctgcagcagcggggcctg
gagctcgctaacacctctgcctacctgaccatcacgggcgtggagagcattgcggtttac
gaggagatcctgcgccaggtctcctaccacatcaaccacggtgctgccctctatgaaagg
aagttccacctgtcctgcacggagatgaatggacgctactccagcaatgaatttactgtc
gaggtgaatgttcttcacaacatgaaccgagctgctcatcctaaccatattctgaactcc
cagcagtttgtgcaccgaggccatcacttacccgcagagctgtctgggcacagtttggca
agcacccacagcaacccaatggtccccagtgctgccactgtcatcatcgtggtgtgcgtg
ggcttcctggcacttatggtgatcctcggcatcctgcgcatccactccctgcaccggcgg
ggagtggggcaagaggtccccggggctgctgtgtcggggcacaccagcactggaggcaaa
gagagcgacatgttctgggatgactcagccctcaccatcatcgtcaaccccatggagtcc
taccagagctgtcaggagagggcagcagggagtgtggagggcagagccggcgagggcatg
gaggatgacgacgatgacagcaccgactcggagacacccgactccccggacagcagtgac
atgaatgaccggcacatcatcggcaaaagcgacgtctctcaccgctactag
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