Hirundo rustica (Barn swallow): 120748234
Help
Entry
120748234 CDS
T09369
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04120
Ubiquitin mediated proteolysis
hrt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120748234 (SYVN1)
04120 Ubiquitin mediated proteolysis
120748234 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120748234 (SYVN1)
Enzymes [BR:
hrt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120748234 (SYVN1)
Ubiquitin system [BR:
hrt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120748234 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
120748234
NCBI-ProteinID:
XP_039910279
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MLCTALVMAGSLALTTAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHFRIVSLMFLLGILDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQNENPWDNKAVFMLYTELFTGLIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATAEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPPQPPPEPAPAPAPAAPAAGAQ
PQNLPQGMLPPFPPGMFPFWPPVGPFPPGPAVQAPAGTEGSATTAGAAPGARAGAAGAGS
EPGAAGAVPGLPLPPPWVGIPWPPLLAVPPMPVPPAGFAGLTEEELRAMEGSERQHLEAR
LQCLHNIHTLLDAAMLQINQYLSVLGALGTPRAAPRPPPAREAPTEEPPAPSGAAGAS
NT seq
1615 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgcacggcgctggtgatggccgggagcctggcgctcaccacggccgtggtggcc
cacgcctactacctgaagcaccagttctaccccaccgtggtgtacctcaccaaatccagc
cccagcatggccgtgttgtacatccaggccttcgtgctggtgttcctgctgggcaagttc
atggggaaggttttcttcgggcagctgcgggcggccgagatggagcacctcctggagcgc
tcgtggtacgcggtgaccgagacctgcctggccttcaccgtcttcagggacgacttcagc
ccgcgcttcgtcgccctcttcaccctcctcctcttcctcaagtgcttccactggctggcc
gaggaccgagtggattttatggagaggagccccaacatctcgtggctcttccacttccga
atcgtctccctgatgttcctgctgggaatcctggacttcctcttcgtcagccacgcctac
cacagcatcctgacgcgcggcgcctccgtgcagctcgtcttcggcttcgagtacgccatc
ctgatgaccatggtgctgaccatcttcatcaagtacgtgctgcactcggtggacctgcag
aacgagaacccctgggacaacaaggccgtgttcatgctctacaccgagctcttcaccggg
ctgatcaaggtgctgctctacatggccttcatgaccatcatgatcaaggtgcacaccttc
ccgctcttcgccatccgccccatgtacctggccatgaggcagttcaagaaggccgtcact
gacgccatcatgtcccgccgggccatccgcaacatgaacacgctgtatcccgacgccacg
gccgaggagctgcaggccatggacaacgtgtgcatcatctgccgcgaggagatggtgacg
ggcgccaagcgcctgccctgcaaccacatcttccacaccagctgcctgcgctcgtggttc
cagcggcagcagacgtgtcccacgtgccgcatggacgtgctccgcgcctcgctgccgccg
cagccgccgccggaaccggcaccggcaccggcaccggcagcgcccgcggcgggagcacag
ccccagaaccttccccagggaatgctccctcccttcccgccgggaatgttcccgttctgg
ccgcccgtgggacccttcccgcccggccccgctgtccaggccccagccggaaccgagggc
tcggccacgacggccggcgccgctcccggtgcccgtgccggtgccgccggtgccgggtcg
gagccgggcgctgccggggcggtgccggggctgccgctgccgccgccgtgggtggggatc
ccgtggccgccgctcctggcggtgccgcccatgccggtgccgccggccggctttgccggg
ctgacggaggaggagctgcgcgccatggagggcagcgagcggcagcacctggaggcgcgg
ctgcagtgcctgcacaacatccacacgctgctggacgccgccatgctgcagatcaaccag
tacctgagcgtgctgggcgccctcgggaccccccgagctgccccccggccgccccccgcc
cgcgaggcgcccacggaggagcccccggcaccctcgggagccgccggagccagcg
DBGET
integrated database retrieval system
