Hirundo rustica (Barn swallow): 120748306
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Entry
120748306 CDS
T09369
Name
(RefSeq) LOW QUALITY PROTEIN: cysteine protease ATG4D-like
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04136
Autophagy - other
hrt04140
Autophagy - animal
hrt04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
120748306
04140 Autophagy - animal
120748306
04136 Autophagy - other
120748306
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hrt01002
]
120748306
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120748306
03029 Mitochondrial biogenesis [BR:
hrt03029
]
120748306
Peptidases and inhibitors [BR:
hrt01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
120748306
Membrane trafficking [BR:
hrt04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
120748306
Mitochondrial biogenesis [BR:
hrt03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
120748306
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
120748306
NCBI-ProteinID:
XP_058275151
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MGYREREWDAGIREWDTGKGVLASEFPGFGVPGVRVPGVRCSRDPGLPGSPLSPVSPPRL
DAAAAAPLQPPDPLYLLGRVYAPGRGEELARFRRDFCSRLWFTYRSGFPALPGAGRSTDC
GWGCTLRSAQMLLGQGLLLHLLGRDWLWPEALRELEPGAPRRSRDPPGRARDPRDGARDP
RDGARDPPGRVQDPPGWARSPANGQGPPRWTRSPPGRHGTPRDGHGTPPGQLRDPPGQLR
DPPGQLRDPSGQLRDPSGQLRDPPGRARPLPGAPRAPRDAEQRHRAIVSWFSDHPRAPFG
IHRLVELGREFGKSAGDWFGPAIAAHLLRGAVESCTETXRLAVYVAQDCTVYKGDVARLV
RGDPERGTAASGTTGTTGTTGAPGTPGTAGTAGPGAPGPGAPGTAGTPETSGTPGPGTAG
TTGPGAPGTPGAPEPGQRRGLVLLVPARLGGESLNPVYVECVKELLQLRSCLGIIGGKPR
HSLLYFLGFQGDSLLYLDPHLCQPCVDTARENFPSESFHCCFPRKMSFGKMDPSCTFGFY
ARGTELERLWGDLARVLAAPSAPERYPIFTLAEGRAQALDAPPGPPPAPRRGRRPKNPNS
EEFVLL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgggataccgggaacgggaatgggacgccgggatacgggaatgggacaccgggaaaggg
gtactggcctcggagttcccggggttcggggttcccggggttcgggttcccggggttcgg
tgctcccgggatccggggctcccggggtcccctctcagccccgtttccccccccaggttg
gacgctgcggccgcggccccacttcagcccccggaccccctgtacctgctggggagggtc
tacgcaccggggcgcggggaggagctggcgcggttccggcgggatttctgctcccggctg
tggttcacgtaccggagcgggttccccgcgctgcccggggccgggcgcagcaccgactgc
ggctggggctgcaccctgcgcagcgcgcagatgctgctgggccaggggctgctgctgcac
ctgctgggccgcgactggctgtggccggaggcgctgcgggaactggagccgggggcgccc
cgcaggagccgcgaccccccgggacgggcacgggacccccgggatggagcgagggacccc
cgggatggagcgagggaccccccaggacgggtccaggaccccccgggatgggcgcgatcc
cccgcgaatggacagggaccccccaggtggacacggagtcctccggggagacacgggacc
cctcgggacgggcacgggacccccccgggacagctccgggatcccccgggacagctccgg
gaccccccgggacagctccgggacccctcgggacagctccgggacccctcgggacagctc
cgggatcccccgggacgggcgcggcccctcccgggcgccccccgagccccccgggacgcg
gagcagcggcaccgggccatcgtgtcctggttctccgatcacccccgcgccccgttcggg
atccaccggctcgtggagctgggccgggagttcggcaagagcgccggggactggttcggc
ccggccatcgccgcccacctcctgcggggggccgtggaatcctgcaccgagaccncccgg
ctcgccgtctacgtggcccaggattgcaccgtttacaaaggggacgtggccaggttggtg
cggggcgaccctgagagggggacagcggcatcgggaacaacgggaacaacgggaacaacg
ggagcaccgggaacaccgggaacagcgggaacagcgggaccgggagcaccgggaccggga
gcaccgggaacagcgggaacaccggaaacatcgggaacaccgggaccgggaacagcggga
acaacgggaccgggagcaccgggaacaccgggagcgccggagccgggacagcgccgcggg
ctcgtcctgctggtgccggcgcgtttggggggcgagagcctgaaccccgtgtacgtggag
tgtgtcaaggagctgctgcagctccgctcctgtctcggcatcatcggcggaaaaccgcgg
cactcgctactctacttcctcggcttccaaggtgattccctgctctacctggacccgcac
ctctgccagccctgcgtggacacggcccgggagaattttccctctgagtccttccactgc
tgctttccgcggaaaatgtccttcgggaagatggatcccagctgcaccttcggcttctac
gcccgcgggacggagctggagcggctctggggggacctggcccgggtgctggccgccccc
tcggctccggagcgttatcccatcttcacgctggccgagggtcgcgcccaggccctggac
gccccccccgggccccctcccgccccccgccgggggaggcgccccaaaaaccccaactcg
gaggagttcgtgctgctgtga
DBGET
integrated database retrieval system
