Hirundo rustica (Barn swallow): 120748317
Help
Entry
120748317 CDS
T09369
Symbol
TNPO2
Name
(RefSeq) LOW QUALITY PROTEIN: transportin-2
KO
K18727
transportin-2
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120748317 (TNPO2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120748317 (TNPO2)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120748317 (TNPO2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
HEAT_GCN1
Arm
HEAT_2
IBN_N
TOR1L1_N
HEAT_EF3_N
Cnd1
TPR_IPO5
Vac14_Fab1_bd
TPR_DNAAF5
PDS5
HEAT_MROH2B_C
Adaptin_N
MMS19_C
Ltn1_1st
HEAT_GCN1_C
INTS7_N
Dopey_N
UNC45-central
SCD
VPS15-like_hel
HEAT_MROH2B_1st
TPR_TTI1_C
TPR_IPO11
RTP1_C1
DUF2573
DUF3689
Motif
Other DBs
NCBI-GeneID:
120748317
NCBI-ProteinID:
XP_039910379
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MDWQPDEQGLQQVLQLLKDSQSPNTATQRVVQDKLKQLNQFPDFNNYLIFVLTRLKSEDE
PTRSLSGLILKNNVKAHFQSFPPPVAEFIKQECLNHLGDASSLIRATIGILITTIASKGE
LQMWPELLPQLCNLLNSEDYNTCEGAFGALQKICEDSSELLDSDALNRPLNVMIPKFLQF
FKHCSPKIRSHAIACVNQFIMDRAQALMENIDTFIEHLFALAVDEDPEVRKNVCRALVML
LEVRIDRLIPHMYSIIQYMLQRTQDSDENVALEACEFWLTLAEQPICKDVLTAHLVQLIP
ILVHGMRYSEIDIILLKGDVEEDEAVPDSEQDIKPRFHKSRTVTLAHEEQRGGDGDGDDE
DDDDTLSDWNLRKCSAAALDVLANVFREELLPHLLPLLKELLFHLEWVVKESGILVLGAI
AEGCMQGMVPYLPELIPHLIRCLADRKALVRSIACWTLSRYAHWVVAQPPELYLKPLMTE
LLQRILDGNKRVQEAACSAFATLEEEACTELVPYLSFILDTLVFAFGKYQHKNLLILYDA
IGTLADSVGHHLNQPEYIQKLMPPLIQKWNELKDEDKDLFPLLECLSSVATALQSGFLPY
CEPVYQRCVTLVQKTLAQAMMYNQHPXQYEAPDKDFMIVALDLLSGLAEGLGGHVEQLVA
RSNIMTLLFQCMQDTMPEVRQSSFALLGDLTKACFVHVKPCIAEFMPILGTNLNPEFISV
CNNATWAIGEICMQMGAEMQPYVPMVLNNLVEIINRPNTPKTLLENTAITIGRLGFVCPQ
EVAPMLPQFIRPWCTSLRNIRDNEEKDSAFRGICVMIGVNPGGVVQDFIFFCDAVASWVS
PKDDLRDMFYKILQGFKAQVGEQNWQQFSEQFPPLLKERLAAFYGV
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggactggcagccggacgagcagggcctgcagcaggtgctgcagctgctcaaggactcg
cagtcgcccaacacggccacgcagagagtggtgcaggataagctgaagcagctgaaccaa
ttcccggatttcaacaattacctgatcttcgtgctgacgcgcctcaagtccgaagacgag
cccacgcgctccctgagcgggctgatcctcaagaacaacgtcaaggcgcatttccagagc
tttccgccgcccgtggccgagttcatcaagcaggagtgcctgaaccacctgggcgacgcc
tcctcgctcatccgcgccaccatcggtatcctgatcaccaccatcgcctccaagggcgag
ctgcagatgtggccggagctgctgccgcagctctgcaacctgctcaactccgaggactac
aacacctgcgagggcgctttcggggcgctgcagaagatctgcgaggattcctcggagctg
ctggacagcgacgccctgaaccggccgctcaacgtcatgatccccaagttcctgcagttc
ttcaagcactgcagccccaagatcaggtcccacgccatcgcctgcgtgaaccagttcatc
atggaccgggcacaggcgctgatggagaacatcgacaccttcatcgagcacctgttcgcg
ctggcggtggacgaggaccccgaggtgcgcaagaacgtgtgcagggcgctggtgatgctg
ctggaggtgcgcatcgaccgcctgatcccccacatgtacagcatcatccagtacatgctg
cagaggacccaggacagcgatgagaacgtggcgctggaggcctgcgagttctggctgacg
ctggcggagcagcccatctgcaaggacgtgctgacggcgcacctggtgcagctgatcccg
atcctggtgcacgggatgagatactcggagatcgacatcatcctgctcaagggcgacgtg
gaggaggacgaggccgtccccgacagcgagcaggacatcaagccgcgcttccacaagtcg
cgcacggtgacgctggcgcacgaggagcagcgcggcggcgacggcgacggcgacgacgag
gacgacgacgacaccctgtccgactggaacctgcggaagtgctcggcggcggcgctggac
gtcctggccaacgtgttccgcgaggagctgctgccgcacctgctgccgctgctcaaggag
ctgctcttccacctcgagtgggtggtcaaggagtcggggatcctcgtgctgggggccatc
gccgaaggctgcatgcagggcatggtgccgtacctgcccgagctgatcccgcacctgatc
cgctgcctggcggaccgcaaggcgctggtgcgctccatcgcctgctggacgctcagccgc
tacgcgcactgggtggtggcgcagccgcccgagctctacctgaaaccgctcatgaccgag
ctgctgcagcgcatcctggacggcaacaagcgcgtgcaggaggcggcctgcagcgccttc
gccacgctggaggaggaggcgtgcacggagctggtgccgtacctgagcttcatcctggac
acgctggtgttcgccttcggcaagtaccagcacaagaacctgctcatcctctacgacgcc
atcggcaccctggccgactccgtgggccaccacctcaaccagccggagtacatccagaag
ctgatgccgccgctgatccagaagtggaacgagctcaaggacgaggacaaggatctgttc
cctctgctggagtgcctgtcgtcggtggccacggcgctgcagagcgggttcctgccctac
tgcgagcccgtgtaccagcgctgcgtcaccctggtgcagaaaacgctggcgcaggccatg
atgtacaaccagcacccgnagcagtacgaggcccccgacaaggatttcatgatcgtggct
ctggacctgctgagcggcctggccgaggggctgggcggccacgtggagcagctggtggct
cgctccaacatcatgaccctgctgttccagtgcatgcaggacacgatgcccgaggtgcgc
cagagctccttcgcgctcctgggtgacctcaccaaggcctgcttcgtgcacgtcaagccc
tgcatcgccgagttcatgcccatcctgggcaccaacctgaaccccgagttcatctccgtg
tgcaacaacgcgacctgggccatcggggagatctgcatgcagatgggggccgagatgcag
ccctacgtccccatggtcctcaacaacctggtggagatcatcaaccgccccaacaccccc
aaaacgctgctggagaacacggccatcaccatcggccgcctgggcttcgtgtgcccgcag
gaggtggcgccgatgctgccgcagttcatccggccctggtgcacgtcgctgcggaacatc
cgcgacaacgaggagaaggattcggcgttccgcgggatctgcgtcatgatcggggtcaac
ccggggggcgtggtgcaggatttcatcttcttctgcgacgccgtggcgtcctgggtgagc
cccaaggacgacctgagggacatgttctacaagatcctgcagggtttcaaggcgcaggtg
ggcgagcagaactggcagcagttctcggagcagttcccgccgctgctcaaggagcgcctg
gcggccttctacggggtctga
DBGET
integrated database retrieval system
