Hirundo rustica (Barn swallow): 120748439
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Entry
120748439 CDS
T09369
Symbol
ROBO1
Name
(RefSeq) roundabout homolog 1 isoform X1
KO
K06753
roundabout, axon guidance receptor 1
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrt04515
]
120748439 (ROBO1)
Cell adhesion molecules [BR:
hrt04515
]
Immunoglobulin superfamily
ROBO family
120748439 (ROBO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
Ig_2
fn3
V-set
C2-set_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Big_4
Motif
Other DBs
NCBI-GeneID:
120748439
NCBI-ProteinID:
XP_039910642
LinkDB
All DBs
Position
2:complement(14340345..15038894)
Genome browser
AA seq
1654 aa
AA seq
DB search
MKWKHYPFLAVVAVFSLSRCHQLLGQLIPDSEDLERGNDSGTPLPTSDNGDNSLGYTGSR
LRQEDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRM
LLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAVSHNASLEVAILRDDFRQNPSDVM
VAVGEPAVMECQPPRGHPEPTISWKKDGTPLDDKDERITIRGGKLMITYTRKNDAGKYVC
VGTNMVGERESEVAELTVLERPSFVKRPSNLAVTVDDSAEFKCEARGDPVPTVRWRKDDG
ELPKARYEIRDDHTLKIRKVTAGDMGSYTCVAENMVGKAEASATLTVQEPPQFVVKPRDQ
VAALGRTVTFQCEATGNPQPAIFWRREGSQNLLFSYQPPQSSSRFSVSQTGDLTITNVQR
SDVGYYICQTLNVAGSIITKAYLEVTDVIADRPPPVIRQGPVNQTVAVDGTLVLNCVATG
TLMPTILWKKDGILISTQDSRIKQLETGALQIRYAKLGDTGRYTCIASTPSGEATWSAFI
EVQEFGVPVQPPRPTDPNLIPSAPSKPEVTDVGRNTVTLSWQPNLNSGATPTSYIIEAFS
HASGSSWQTVAENVKTESFAVKGLKPNAIYLFLVRAANAYGLSDPSQISDPVKTQDVPPT
SQGVDHKQVQRELGDVVLHLHNPTILSSSSIEVHWTVDQQSQYIQGYKILYRPTPASYGE
SEWLIFEVRTPTKNSVIIPELKKGVNYEIKARPFFNEFQGADSEVKFAKTLEEAPSAPPQ
SVSVTKNDGNGTAIVVTWQPPPEDNQNGMVQEYKVWCLGNESRYHINKTVDGTTFSVVIP
SLVPGIRYSVEVAASTGAGPGVKSDPQFIQLDSHGNPVSSEDQVSLAQQISDVVKQPAFI
AGIGAACWIILMVFSIWLYRHRKKRNGLTSTYAGIRKVPSFTFTPTVTYQRGGEAVSSGG
RPGLLNISEPATQPWLADTWPNTGNNHNDCSINCCTSGNGNSDSNLTTYSRPADCIANYN
NQLDNKQTNLMLPESTVYGDVDLSNKINEMKTFNSPNLKDGRFVSQPGQPTPYATTQLIQ
SSISNNVNNGSGDTNEKHWKPSVQQKQEVPPIQYNIMEQNKLNKDYRVNDNIAPTIPYNQ
SYDQNTGGSYNSSDRGSSTSGSQGHKKGARTPKAPKQAGMNWADLLPPPPAHPPPHSNSE
DYSLSVDESYDQEIPCPVPPARMYLQQDELEEEEEDERGPTPPVRGAASSPAAVSYSHQS
TATLTPSPQEELQPMLQDCQEDLGHTQHQPDRRRQPVSPPPPPRPISPPHTYGYISGPLV
SDMDTDAPEEEEDEADMEVAKMQNRRLLLRGLEQTPASSVGDLESSVTGSMINGWGSASE
EDNISSGRSSVSSSDGSFFTDADFAQAVAAAAEYAGLKVARRQMHEAAGGRRHFHASHCP
RPTSPVSTDSNMSAVVIQKVRPAKKQKHQPGHLRREVYTDDLPPPPVPPPAIKSPTAQSK
SQLEVRPVMLPKLASMDTRTDRSADRKGVSYKGRDGAEGRQHPDVRTGSGERREPLEQQN
DGKPRASKAPKRDGAPAKSHLLQEDILPYSRPTFPTSNNPRDPSSSSSMSSRGSGGRQRA
DQANLARRNVAEMQVLGAYEQGEEEEEEMEETES
NT seq
4965 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggaaacattatccttttctggctgtagtagctgtgttcagcctttccagatgc
catcagttactgggtcagctcattccagactccgaagacctagagagggggaacgacagc
gggacaccactccccacctctgataacggcgacaattcgctgggctacacaggttcccgt
cttcgacaggaggatttcccgcctcgaatcgtggaacacccctccgatttgattgtttcc
aaaggagaaccagccactttgaactgcaaagcagagggaaggccgacccccaccatcgag
tggtacaaggggggggaaagggtggaaacggacaaggatgacccgcgctcccaccggatg
ctgctgcccagcggatctttatttttcctgcgcatcgtgcacgggcgcaagagccggccg
gacgaaggggtctatgtgtgtgtggcaaggaattacctcggggaggctgtaagtcacaat
gcatcgctggaggtggcaattctgcgggatgacttcagacaaaatccatcagatgtcatg
gtagctgtgggggaacctgcagtgatggaatgccagcccccgagaggtcacccagaaccc
actatatcatggaagaaagatgggacccctctagatgacaaagatgagagaattacaatc
agaggaggaaagcttatgatcacatacacgagaaagaatgatgctgggaaatacgtttgt
gttggaacaaatatggttggagaacgtgaaagtgaagttgcagagctcactgttttagag
agaccatcttttgtgaagaggccgagcaatttggcagtaactgtggatgacagtgcagag
tttaagtgtgaggcaaggggtgacccagtccctacagtgagatggaggaaagatgatggg
gagctaccaaaagcaagatacgaaatccgtgatgatcataccttgaaaatcaggaaagtt
acggcaggagacatgggatcatacacttgtgttgcagaaaatatggttggaaaagctgag
gcatcagcaactttaacagttcaagagcctccacagtttgttgtaaagcctcgagaccag
gtggctgcactggggagaacggtgactttccagtgcgaagcaactggaaaccctcagcca
gccatcttctggaggagagaagggagtcagaatctgcttttctcataccagccccctcag
tcatctagccgattttcagtgtcccagacaggagacctcaccatcaccaatgtgcagaga
tctgatgttggatactacatctgccagactttaaatgttgcaggaagtatcataacaaaa
gcctacttggaagttacagatgtgattgcagaccggcctccccctgtcattcggcagggt
cctgtgaatcagactgtagctgtggatggtactttggtactgaactgtgtggccacaggc
actttaatgcccactatcctctggaaaaaggatgggatcctcatttccacccaagactct
cgcatcaagcagctggagacaggagcgctgcagatcagatacgccaagctgggcgacacc
gggcggtacacctgcattgcctcaaccccgagcggcgaagcgacgtggagcgcgttcata
gaggtccaagagtttggagtcccagtgcagccaccaagacccactgacccaaacttgatt
cctagtgctccatcaaagcctgaggttacagatgtcggcagaaatacagtaacattgtca
tggcaacctaatttgaattcaggtgcaacaccaacctcttacataattgaggccttcagc
catgcatcagggagcagctggcaaactgtagctgaaaatgtgaaaaccgagagttttgca
gttaaagggctaaaacctaatgcaatttatctcttccttgtgagagcagctaatgcatat
gggctgagcgacccaagccaaatatctgatccagtgaaaactcaagatgttccgccaaca
agtcaaggtgtggatcacaagcaggtccagagagagctgggtgatgtggtgctacatctg
cacaaccctactatcctttcctcctcctccattgaggttcattggactgtggaccagcaa
tcccagtacattcaagggtataaaattctgtaccggcctacaccagcatcttatggagag
tcagagtggttaatctttgaagtgaggactccaaccaaaaacagcgttatcattccggag
ctgaagaaaggtgtaaactacgaaatcaaggcccgccctttctttaatgagtttcagggg
gcagatagtgaagtgaaatttgcaaagaccctggaagaagctcctagtgctccacctcag
agtgtttcagtcactaagaacgatgggaacgggacagcaatcgtggtcacctggcagccc
ccccctgaggacaaccagaacgggatggttcaagaatacaaggtttggtgccttggcaat
gaaagccgataccacataaacaagacagtggatggaaccaccttctccgtagtcatcccc
tccctggttcccggcatccgatacagtgtggaagtggctgcaagcaccggggcaggacct
ggcgtgaaaagtgatccccagtttatccagttagattctcatggaaaccctgtgtcttca
gaagatcaagtcagtttagcccagcagatttctgacgtagtaaagcagcccgcctttatt
gctggaattggtgcagcctgttggatcatcctcatggtcttcagcatctggttgtatcgc
cacaggaagaagaggaacggactcacgagtacttacgctggtatcagaaaagtcccgtct
tttaccttcacaccaacagtaacatatcagagaggaggagaggccgtaagcagtggaggc
aggcctggactcctaaacatcagtgaaccggccactcagccatggttagcagatacctgg
cctaacacagggaacaatcacaatgactgctccatcaactgctgcacctccggcaatggc
aacagcgatagcaaccttacaacgtacagtcgaccagccgattgtatagcaaattacaac
aatcagctggacaacaagcagacaaacctgatgttgcctgagtcaactgtgtatggggac
gtggacctcagcaacaaaatcaatgagatgaaaaccttcaatagtccaaatctaaaggac
ggaagatttgtcagccagcctgggcagcccactccttatgccaccactcagctcatccag
tccagtatcagcaataatgttaacaatggcagcggggacacgaatgagaaacactggaaa
ccctctgttcagcaaaagcaagaggttccacccatacagtacaacattatggagcaaaac
aaattaaacaaagattaccgagtaaatgacaacattgctccaactattccctacaaccag
tcatatgaccagaatacaggtggatcctacaacagctcagacagaggcagcagtacctct
gggagtcaagggcacaagaagggtgctcggaccccaaaggctcccaagcaagctggcatg
aactgggcagatcttctcccaccccctccagcacatccacctccccacagcaacagcgaa
gattacagtctttcagtggatgaaagctatgaccaagaaattccttgtcccgtgccacct
gcaaggatgtatctgcagcaggatgagctagaggaagaggaagaagatgagcgaggtcct
actccacctgtccgaggagcagcttcctctccagccgctgtctcctatagccatcagtca
actgccactctcaccccctctccccaggaagaactccagcccatgttacaggactgtcag
gaggatctgggacacacacaacaccaacctgaccggagacgtcaacctgtgagtcctcca
ccccctccaaggcccatctccccaccacacacctacggatacatctcagggcccttggtc
tctgacatggatactgacgccccggaagaggaggaggatgaggcagatatggaggttgcc
aagatgcagaacaggaggctccttttgcgtggcctggagcagacccctgcctccagcgtt
ggggatttggagagctctgtgacagggtccatgatcaatggctggggctcagcctctgaa
gaagacaacatctccagcgggcgctccagcgtgagctcctctgacggatcgtttttcacc
gacgccgattttgcacaggctgtcgcagcagctgcggagtacgccgggctcaaggtggcc
agacggcaaatgcacgaggcagcgggaggccgcagacattttcatgcatcacactgtccc
agacccaccagccctgtatccaccgacagcaacatgagcgctgttgtgatacagaaggtc
cgacctgccaaaaagcaaaagcaccagccaggacatctgcgcagagaagtctacacagat
gatctgcccccccctcctgtgccccctccagccattaagtccccgacggcacagtccaag
tcacagctggaggtgcggccggtgatgctgcccaaactcgcctccatggacaccaggacg
gacagatccgcagacaggaagggcgtgagctacaagggcagggacggggcggagggcagg
cagcatcccgatgtgcggacgggctcgggggagcgcagagagcccctggagcagcaaaac
gatggcaaaccgcgagcgagcaaagcaccaaaacgagacggcgcaccagcaaaaagtcat
cttctccaagaggacatcctgccatattccagaccaacgtttccaacatcaaataatcct
agagatcccagctcctctagctccatgtcatcaagagggtcgggaggcagacagagggca
gatcaagcaaatctagctcgaaggaatgttgcagaaatgcaagtactgggagcctatgaa
caaggagaagaggaagaagaagagatggaggaaacagaaagctga
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