Hirundo rustica (Barn swallow): 120748464
Help
Entry
120748464 CDS
T09369
Symbol
USP25
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 25 isoform X1
KO
K11849
ubiquitin carboxyl-terminal hydrolase 25 [EC:
3.4.19.12
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hrt01002
]
120748464 (USP25)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120748464 (USP25)
Enzymes [BR:
hrt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120748464 (USP25)
Peptidases and inhibitors [BR:
hrt01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120748464 (USP25)
Ubiquitin system [BR:
hrt04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120748464 (USP25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
USP_UIM_N
UBA_8
UIM
UIM_2
UBA_4
Motif
Other DBs
NCBI-GeneID:
120748464
NCBI-ProteinID:
XP_039910716
LinkDB
All DBs
Position
2:complement(12332110..12426068)
Genome browser
AA seq
1117 aa
AA seq
DB search
MTVEQNVLQPGGAAKHQQTFLNQLREITGINDIQVLQQALKDSNGNLELAVAFLTAKNAK
VPQLEEATYYQTALPGNDRYISVGSQADTNVIDLTGDDKDDLQRAIALSLEESNRAFRET
GITDEEQAISRVLEASIAENKASLKRTHPEVWSDSPNPYDRKRQDNCPVGLKNVGNTCWF
SAVIQSLFNLLEFRRLVLNFNPPANAQDLPRNQKEHRNLPFMRELRYLFALLVGSKRKYV
DPSRAVEILKDAFKSNDSQQQDVSEFTHKLLDWLEDAFQIKAEEERDGEKPKNPMVELFY
GRFLAVGVLEGKKFENTEMFGQYPLQVNGFKDLHECLEAAMIEGEIESLHSENSAKSGQE
HWFTELPPVLTFELSRFEFNQALGRPEKIHNKLEFPPILYLDRYMHKNREITRIKRDEIK
RLKEYLTVLQQRLERYLSYGSGPKRFPLVDVLQYALEFASSKPVCTSPVDDLGASAPASS
TLPPQIPPSTIEQQGPSSSDVPSTSPVQRSVIHKPFTQSRIPPDLPMHPAPRHITEEELS
VLEGCLHRWRTEVENDTRDLQESISRIHRTIELMYSDKTMVQVPYRLHAVLVHEGQANAG
HYWAYIYDHHQNRWMKYNDISVTKSTWEELERDSFGGYRNASAYCLMYINDKEQYLIQEE
FNKETGQILVGMDTLPSDLRDYVKEDNKRFEKELEEWDAELAQKAQQEKLLSQIPRAPAP
SPAPVQAGEPEYLEQPSRTDISKHLKEDSVQAINKALAEQEDRGPEAIMDTSSDNAPAQA
APTQRVVEVAIPDVGTFVIESEEGGYDDEVMLTPNMQGIIMAIGKARNVYDRCGPEAGFF
KAIKLEYTRLLKLAQEDPPPECDYRLRHAIVYFIQNQAPKKIIERTLLEQFGDHNLSFDE
RCRNIMKVAQAKLEMIKPDEVNMEEYERWHQDYRHFRETTMFLMVGLEFFQKKSYMEALL
YLIYAYQNNKELLSKGPYRGHDEELISHYRRECLLKLNEHAAALFESGDDQEVNNGLIIM
NELIVPCLPLLLVDEMEEKDIVAVEDMRNRWCSYLGQEMEPNLQEKLTDFLPKLLDCSTE
IKGFNDPPKLPSYSTHELCERYARIMLSLSRTPADGR
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggagcagaacgtgctgcagcccggcggcgccgccaagcaccagcaaacattt
ttaaatcagctgagggagatcactggtatcaatgacatccaggtactacaacaggcactg
aaggacagcaatggtaatctggagttggctgtggcttttctcaccgcgaagaatgccaag
gttccccagctagaggaggcaacttactaccaaacagcccttcctgggaatgacagatac
atcagcgtgggcagccaggcagacactaatgtgattgatctcactggagatgataaagat
gatcttcagagggcaattgccttgagtttggaggaatcaaacagggcattcagggagact
ggaataacagatgaggaacaagccattagcagagttctagaagccagtattgcagaaaat
aaagcaagtttaaagaggacgcatccagaggtatggagtgactctccgaacccttatgat
cgaaagcggcaagacaactgtccagtaggattaaagaatgttggcaacacatgctggttt
agtgctgtcattcagtcattatttaacctactggagtttcgaagactagttttgaatttc
aatccccctgcaaatgctcaagatttgccccgaaaccaaaaggaacataggaatctgcct
ttcatgcgtgaattgaggtacctgtttgcacttctagttggttcaaagagaaaatatgtc
gatccatcaagagcagttgaaatccttaaagatgcttttaaatcaaatgattcccaacag
caagacgttagtgaatttacacacaaattattagattggctagaagatgccttccaaatt
aaagctgaagaagagagggatggagagaaaccaaagaacccaatggtggagttgttttat
ggacgatttctagcagtaggtgtacttgaaggtaaaaaatttgaaaatacagaaatgttt
ggccagtatccacttcaggttaatggctttaaagatctgcatgagtgcctagaagctgca
atgattgaaggggaaattgaatctctccattcagaaaactctgcaaagtctggtcaggag
cactggttcacagagcttcctcctgtcttaacttttgagctgtcaagatttgagtttaat
caggctttggggagaccagagaagatacacaacaaattagaatttcctccaattttgtat
ctagacaggtacatgcacaaaaacagagaaataacaagaattaaacgagatgaaatcaag
agactcaaagagtacctcacagttttacaacagagattagaacgatatttaagctatggt
tctggtcctaaacgattccccttggtagatgtcctgcagtatgccctggagtttgcctcc
agcaagccggtgtgcacgtcccccgtggatgacctgggtgccagtgcccccgccagcagc
acgctgccaccacagatcccccccagcacaatagagcagcaggggccttcatcatcagat
gtcccaagcacatctcctgttcaaagatcagtaatacataaaccattcacacaatcacgg
attcctcctgacctgcccatgcatccggccccaaggcacatcacggaggaggagctgtct
gtcctcgagggctgtttgcatcgctggaggactgaagtagagaatgacacaagagattta
caggaaagtatatctagaatacatcggacaattgaattgatgtactctgacaaaacaatg
gtccaagttccgtataggttgcatgctgtcttagttcatgagggtcaagcgaatgcggga
cactactgggcatatatttatgaccaccaccagaacagatggatgaaatataatgatatt
tctgtgacaaagtcaacttgggaagagttggaacgggactcttttggtggttacaggaat
gccagtgcatattgtttaatgtatatcaatgacaaggaacagtacttgatacaagaggag
tttaacaaagaaacggggcagatccttgttggaatggacacgctgccttctgatctaagg
gattatgtcaaggaagacaataaacgttttgaaaaagagcttgaagagtgggatgcagaa
cttgctcagaaagcacaacaggagaaattgttatctcagatacccagggcaccagcaccc
tcacctgctccagttcaagcaggagaaccagaatacttagagcagccatcaagaactgat
atttcaaagcacttaaaagaagattctgtacaagcaatcaataaagctttagctgaacaa
gaagatagaggtccagaagctataatggatacgagctctgataatgccccagctcaagca
gctcctacccagcgagtggtagaggtggcgatccctgatgtagggacttttgtgattgag
tcagaggaggggggttatgacgatgaggtcatgctgaccccgaacatgcaaggtattatc
atggctataggtaaagccaggaatgtttatgacaggtgtgggccagaagcagggttcttt
aaggcaattaaattggaatacacacgtctgctaaaattagcccaggaagatccaccacct
gaatgtgattatcgtttacgtcatgcaattgtttacttcatccaaaaccaggcaccaaag
aagataattgagagaacattactggagcagtttggagatcacaatctcagctttgatgaa
aggtgtcgtaacataatgaaggttgctcaagccaagcttgaaatgataaagccagatgaa
gtaaacatggaggaatatgagagatggcatcaagactatagacatttcagggaaacaacc
atgttcctcatggtaggattggagtttttccaaaaaaagagttacatggaagccttgctc
taccttatctatgcttaccagaataacaaagaactcttgtccaaaggcccatacagaggg
cacgacgaagagctgatatctcactacagacgagagtgcttgctaaaactaaatgaacat
gctgcagcactgtttgaatcaggagatgatcaggaagtaaataatggcctgatcataatg
aacgagcttattgtcccgtgtttgccattactactggtggatgaaatggaagagaaagat
attgttgctgtggaagatatgagaaaccgttggtgttcctatcttggacaagaaatggaa
cctaacttgcaagaaaaactgacagatttcctgccaaaactgctagattgttctacagag
attaaaggtttcaatgacccgccaaagttaccctcctactccacacatgaactgtgtgaa
agatacgcccgaatcatgttgtcactcagtcgaactccagccgatggaagataa
DBGET
integrated database retrieval system
