Hirundo rustica (Barn swallow): 120748470
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Entry
120748470 CDS
T09369
Symbol
TBC1D8
Name
(RefSeq) TBC1 domain family member 8 isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120748470 (TBC1D8)
Membrane trafficking [BR:
hrt04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120748470 (TBC1D8)
Endosome - Golgi transport
Rab GTPases and associated proteins
120748470 (TBC1D8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAM
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
120748470
NCBI-ProteinID:
XP_039910741
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All DBs
Position
2:complement(88487989..88535754)
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AA seq
1161 aa
AA seq
DB search
MWLKPEEVLLKNALKLWVTQKSSGYFILQRRRGHGDGGGRFTGRLVGALDAVLDSNARVA
PFRILLQVPGSQVYSAIACGELLNGSEVYWAIAIGATAEEINQHWEWLEQNLLHTLSVFD
NKEDIVSFVKGKVKALIAEETSSKLAEQEEDPEKFREALVKFESRFNFPEAEKLITYYSC
CCWKGKVPRQGWLYLSINHLCFYSFFLGKELKLIIPWVEVQKLERTSNVFMTDTVRVTTA
NKERDFSTFLNISEAFRIMEQLADVTLRRLLDNEIFELDPSLQDPTQITKRDLEARAQNE
FFRAFFRLPRKEKLHEVVDCSLWTPFSRCHTAGRMYTSDSYICFASKENGCCTVIIPLRE
VISIEKMEDTSLLPNPIIVSVRSKTAFQFIELKDRDTLVENLLQRLKEVNSGNPLHCNNL
QNNNRNSLAFGSTCTLGDDEPARLGTEASPGKEGSECEKENNYLLNAEALRSDFHQSGMS
GLDFGKSREQIKESLWDDHFVEYGRTVCMFRTEKIRKLVAMGIPESLRGKLWLLFSDAET
DLASHPGYYVHLVEASMGKCCMATEEIERDLHRSLPEHPAFQSETGIAALRRVLTAYAHR
NPRIGYCQSMNILTSVLLLYAKEEEAFWLLVAVCERMLPDYFNHRVIGAQVDQSVFEELI
KEQLPELAEHMKDLTALASISLSWFLTLFLSIMPLESAVNVVDCFFYDGIKAIFQLGLAI
LEANAVDLCNSKDDGQALMILSRFLENVKNEESPLPPIGNHHAFFSDDQESSSPVTEIAN
LIHDSYEKFGDHSVEQIEHMRYKHRIRVLQSHEDTTKQNVLRVVIPDVSILPEDLEELYD
LFKREHLIRCYWESGSAASERHDASRPYAEQYRIDAQQFASLYRLLSPWTCGEHTDLLAH
RTFRLLDDNRDRLIEFKGLASCLDIMYNGEMNEKIKLLYKLHIPPALTENERDSQSPLKN
PLLSTSRPLVIGKSNGDAVDYQKQLKQMLKDLAKEKDTKTEKELPKMSQKEFIQFCKTLY
SMFHEDPEENDLYQAIATVTTLLLQIGEVGQRSISLGSGSDELTEDLQPEASASDQDAVF
TDTVKTPHKDSQPSPVTEGDWTVSFEHILASLLTEQSLVNFFEKPSELKPKLENAKLHQY
GLRTNGMSCLARSEHAKPSMQ
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgtggctgaagcccgaggaggtgctgctgaagaacgccctcaagctgtgggtcacgcag
aagagcagcggctactttatcctgcagcggcgtcggggccacggagacggcggcggccgc
ttcacgggtcgcttggttggtgccctggatgccgtgttagactctaatgcacgtgttgct
ccatttagaattttactccaagttccaggctcacaggtttactctgccattgcatgtggt
gagttattgaatggatcagaagtttactgggccatagctattggtgccactgcagaggaa
ataaaccagcattgggaatggctggaacagaacttgctccatactttgtctgtgtttgac
aataaagaagatattgttagttttgtcaaagggaaagtgaaggcactgattgcagaggaa
acgagcagcaagctcgctgagcaggaggaagaccctgagaaattccgagaagccctggtg
aaatttgaatccagatttaattttcctgaagcagagaagttgatcacctattattcctgt
tgctgctggaaaggaaaagttcctcggcaaggctggctttatttgagcatcaatcatctc
tgtttttattccttcttcctgggcaaagaattgaaacttatcattccttgggttgaagtc
cagaaactggaaagaacctccaatgtcttcatgacagacacagtccgtgtcactacagca
aataaagagcgcgacttctccacgttcctcaatatctctgaggctttcagaatcatggag
caactggcagatgtgacgctccgaaggctactggataatgaaatctttgaactggatcca
agcctgcaggatcctactcagattaccaagagggatcttgaagccagagcacagaacgaa
ttctttcgggccttcttcagattgcccaggaaggagaagctgcacgaagttgtggactgt
tctctctggacgccgttcagtcgctgtcacacagcggggaggatgtatacttcagacagt
tatatctgttttgccagcaaagaaaatggctgctgcactgttatcatcccacttagagag
gtaatcagtatagagaagatggaggacacaagccttctccctaatcctatcattgttagc
gtaaggagtaagacagcctttcagttcattgagctaaaggaccgtgatactttggtggag
aacctgctccagaggttaaaagaggtgaactctggcaaccccttgcactgcaacaacttg
caaaataacaatcggaacagccttgccttcggatccacgtgcacgctgggggatgatgag
cctgcacgtctgggaacagaggcttcaccagggaaagagggaagtgagtgtgaaaaggag
aacaattacttgctcaatgcagaagcactaaggtcagactttcatcagtcaggaatgtca
ggccttgattttggaaagtctagggagcaaatcaaagagagcctgtgggatgaccatttt
gtagagtacggcagaaccgtgtgcatgtttcgcacagagaaaatcagaaaacttgttgct
atgggaatccccgaatccttaagaggcaaactctggctccttttctcagacgccgagacg
gatctcgcctcacatcctgggtattacgtacacttggtggaggcatccatgggcaagtgc
tgcatggcaacagaggagatcgagcgtgacctgcaccgctcgctgcccgagcacccggcc
ttccagagcgagacggggatagccgccctgaggagggtgctcacggcgtacgcgcacagg
aaccccagaataggatactgccagtctatgaatattttgacctcggtgttgttgctgtat
gccaaagaggaagaagccttttggctgctggttgctgtgtgtgagcggatgctgccggat
tacttcaaccaccgagtgataggtgctcaggtagaccagtcggtgtttgaagagcttata
aaagagcaactcccagaactggctgagcatatgaaggatctgactgccctagcttctatc
tctctttcctggttccttacccttttcctcagcatcatgcccctggaaagtgctgtgaat
gttgtggactgcttcttctatgatggcatcaaagccattttccagctgggcttggccatc
ctggaagccaacgctgtggatctgtgtaacagcaaggatgatgggcaggccctgatgatc
ctgagcaggtttttagagaatgttaaaaatgaggaaagccctctgccacctattggtaat
caccatgcattcttcagtgacgaccaggagtcctcctctccagtgactgaaatagcaaat
ctgattcatgactcctatgagaaatttggagaccactctgtggaacagatagagcacatg
cgctacaaacaccggatccgtgtcctgcagagccacgaagacacaaccaagcagaatgtg
ctccgagttgtcatcccagatgtttcaattcttcctgaagatttagaggaattgtatgac
ttgttcaagagggaacatttaatcaggtgctactgggaaagcggcagcgcggcgtcggag
cgccacgacgccagcaggccctacgccgagcagtaccgcatcgacgcgcagcagttcgcc
agcctctaccgcctgctctcgccctggacctgcggggagcacaccgacctgctcgcacac
aggaccttccgcctcctggatgacaacagggaccggctcatcgagttcaaggggctcgcc
agctgcctggatattatgtataacggagaaatgaacgaaaagataaagttactatataag
ctgcatatcccaccagctctcacagaaaatgaacgagacagccagtcaccattaaagaat
cctttgctgtcaacatcaagaccactggtcattggaaaatcaaatggtgatgcagtagat
taccaaaagcaattgaagcagatgctgaaggatctagccaaagaaaaggatactaaaact
gaaaaggaattgccaaaaatgagccagaaggagttcattcagttctgcaaaacattgtat
agcatgtttcatgaagatccagaggagaacgatttgtatcaagccattgccactgtgacc
acactgttacttcagattggagaagtaggacaaaggagcatcagcttggggagtggatca
gatgagctcaccgaggacttgcagcccgaggcctctgcttcagaccaggatgctgttttt
actgacactgtgaagacccctcacaaagactctcaaccttcacctgtgactgaaggggac
tggactgtctcttttgaacatattttagcctccctcttgactgaacaatcactagttaac
ttctttgaaaaaccctcagaactgaaaccaaagcttgagaacgcaaaactacatcaatac
ggtctcagaacaaatggaatgagctgcttggcacggagtgaacatgcaaaaccaagcatg
cagtag
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