Hirundo rustica (Barn swallow): 120748485
Help
Entry
120748485 CDS
T09369
Symbol
NUP98
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03013
Nucleocytoplasmic transport
hrt05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120748485 (NUP98)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
120748485 (NUP98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120748485 (NUP98)
03036 Chromosome and associated proteins [BR:
hrt03036
]
120748485 (NUP98)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120748485 (NUP98)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
120748485 (NUP98)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
ZapB
Motif
Other DBs
NCBI-GeneID:
120748485
NCBI-ProteinID:
XP_039910777
LinkDB
All DBs
Position
2:complement(118877207..118914611)
Genome browser
AA seq
1790 aa
AA seq
DB search
MFNKSFGAPFGGSTGFGTTSTFGQNAGFGTSSGGAFGTSAFGSSSNTGSLFGSTQTKPGG
LFGSTTFNQPATSSTSTGFGFGTSTGTSNSLFGTTSTGGSLFSSQNNAFAQNKPAGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPTSFTAAPTGTTIKFNPPTGTDTMVKSGVSA
SINTKHQCITAMKEYESKSLEELRLEDYQANRKGPTNPVGAGATAGLFGSSTATSSTATG
LFGSSTTNTGFSYGQNKTAFGTSTTGFGTGTTGGLFGQQSQTTSLFNKPFGQATTTQNTG
FSFGGTSTLGQPNTSTMGLFGVTQPSQPGGLFGTAANTNAGTGFGTGTGLFGQANTGFGV
GGSTLFGNKPAGFGTTTTSAPSFGTTTGGGLFGFGANTAGNSLFGNKPATGTLGTGLGTG
FGTALGAGQTSLFGNTQPKLGGTLGTGAFGAPGFNTSTATLGFGAPQPAVALTDPNASAA
QQAVLQQHLNSLAYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRP
ATRVRPKALQSAGSAKSQLFDGLDDDEPSLSNGAFMPKKSIKKLVLKNLSSSNLFSPVSR
ENEDLASPSEYPENGDRFFLSVPPEENHRQDGEREEEEEAHEVTRFYTNPIAKPIPQTPE
GGGHKAQAGVDDTIVALNMRAALRNGLEGSSEDASFQEDSLQEEWDKEAEPGQQLHPAGI
VLTRAGYYTIPSLEELARLTNDRKECIVTDFTIGRRGYGSIYFEGEVNLTNLNLDEIVHI
RRKEVIVYPDDEKKPPIGEGLNRRAEVTLDGVWPTDKTSRCLIKSPERLAEVNYEGRLEA
VSRRQGARFKEYRPETGSWVFKVAHFSKYGLQDSDEEEEDHPSKVDTKKLKTTPVPPPGH
LLPQQMALNGKPAPPAQPPELEQLGRVVELDSDMADITQELAHEPLAEELAEEQEAVPAS
THIASTQGINPYVLQIMKASLLADDDDLDLILDYPGKPLVKMETSQEICSPRLPISKSQG
QKRHSAAGLLQSKLAGVLLQAPSPVADAKAPRALGSPPSAALWSPLASAFSVPAALPEAP
VKTVGARRQRGLVPLERSITYGKGKLLMDMGLFMGRSFRVGWGPNWTLVNCGDQLSGSSE
AEDAQVEPVEYGFLPTPVAPKSLTESPFKVHVEKLSLEQWKVDRDKELYLTPLEIKLKHS
TVHMDEACPLLAPNPGVSAIHDYADWARKASEDPAVAETVVKHWCLAWTLCEAIWGKLKE
LEASLEEPGEYVLALERRRAFSRWLSETAAARIEEEVSLARHGSHVEAVFSCLTGKRIGE
ACRLAQQAGDHRLALLLSQLAGSQPVRDLLTLQLVDWHRLHSDRFIQEERLRLFALLAGK
PVWQLSERISVNVCSLLDWKRCVAVHLWYLLPPTASISKALAMYESAFQNTSECEKYACC
PLPPYLEDSGCVIEEDDNGGRPLRDVCFHLLKLYSDRSYELDQLLDPRSVTSDPLDFRLS
WHLWEVLRALNYSHLSQQSWGVLNTSYAAQLESEGLWEWAVFVMLHEPDTQLREKAVREL
LSRHCALADSPESWAKETFLTQRLCVPPRWIHEAKAVRARMEGDRHKEALFLFKAGHWNQ
CHKLVVRHLASDAIINENYKYLKGFLEDLAPPERSALIQDWELAGLVYLDYIRVNEMLDR
IQQLDVSTYELERLHTKVTSLCNRIEQLQCHNAKDRLAQSDMAKRVANVLRAVLSLQQGP
EAGPEAAEPRVPLRLLAPHIGRLPMPEDYALEELRGLTQAYLRELALAAH
NT seq
5373 nt
NT seq
+upstream
nt +downstream
nt
atgtttaacaaatcctttggagctccgtttggaggcagcaccggctttgggacaacttca
acttttgggcaaaatgccggctttggcacgagcagcggaggagccttcggcacgtcggcc
ttcggctccagcagcaacacgggcagcctcttcgggagcacgcagacaaagccaggaggg
ttgtttgggtccaccacgttcaaccagccagccacctcctccaccagcaccggctttggc
tttggaacatccactgggacgtcgaacagcctcttcggaaccaccagcaccggtggaagc
ctcttctcatcccagaataatgcctttgcacagaacaaacctgctggctttggaaacttt
ggtaccagcaccagcagcggagggctctttgggaccaccaacaccacttccaaccccttt
gggagcacatctggctctctctttggcccaaccagctttactgctgctccaactggcacg
actattaaatttaatcccccgaccggcaccgacaccatggtgaaatccggcgtcagcgcc
agcatcaacaccaagcaccagtgcatcactgccatgaaggagtacgagagcaaatccctc
gaggaactccgcttggaagactaccaggcaaataggaaagggcccacgaatcctgtagga
gcaggagcaactgctggcttgtttggctcttccactgccacgtccagcacagccacagga
ctctttggctcttctactaccaatactggcttttcctatggacagaataaaactgctttt
ggaaccagtaccaccggctttggcaccggcaccaccggggggctctttgggcagcagtca
cagaccacgagcctgttcaacaaacccttcggccaggccaccaccacgcagaacacgggc
ttctccttcgggggcaccagcaccctgggccagcccaacaccagcaccatgggtctcttt
ggggtcacccagccctcgcagcctggaggcctttttgggacagctgccaatacaaatgct
gggactggatttggaacgggaactggcctttttggacaagccaacacaggatttggtgtt
ggtggttcgaccctgtttgggaacaagcctgctggatttggaaccaccacgaccagcgct
ccctcgttcggtaccaccacgggcgggggcctcttcggttttggtgccaacactgctgga
aatagcttgtttggaaataagcctgcgactgggactctgggcactggacttgggacaggg
tttggaacagctctgggggcaggacagacgtccttgtttggaaacacccagcccaagctg
ggggggacactgggaacaggagcgtttggagccccaggattcaacacatccacggccacc
ctgggcttcggggccccccagcctgctgtagctctgacagaccccaacgcctctgcagcc
cagcaagctgtcctgcagcagcacctcaacagcttggcctactcaccctttggggactcc
ccactcttcagaaaccccatgtcagaccccaagaagaaggaggagaggctgaagcccacc
aacccagcggcccagaaggcgctgacaacccccacgcactacaagctgaccccacggcct
gccaccagggtgcggcccaaggccctgcagtcagcgggctcggccaagtcccagctcttc
gacgggctggatgacgacgagccctccttgtccaatggagccttcatgccaaagaagagc
atcaagaagctggttctgaagaacctcagcagcagcaacctgttctctcccgtgagccgg
gagaacgaggacctggcgtcgccgtcggagtacccagagaacggggacaggttcttcctg
tccgtgcctcccgaggagaaccacaggcaggacggggagcgcgaggaggaggaggaggcc
cacgaggtgaccaggttttacaccaaccccatcgccaagcccatcccgcagacgccggag
ggcggcgggcacaaggcgcaggccggcgtggacgacaccatcgtggcgctgaacatgcgc
gcggcgctgcgcaacggcctggagggcagcagcgaggacgcctccttccaggaggattcc
ctgcaggaggagtgggacaaggaggctgagcccgggcagcagctgcaccctgcagggatt
gttctgactcgagctggctattacaccatcccgtccctggaggagctggcccggctgacc
aacgacaggaaggaatgcatcgtgacagacttcaccatcggccgcaggggttatggatcg
atttacttcgaaggagaagtaaatctaacaaacttaaacctggatgaaatcgtacatatc
cggagaaaagaagttattgtttaccctgacgacgagaaaaaacctcccatcggggaaggg
ttgaataggcgggccgaggtcactctggacggggtgtggcccacggacaagacgtcgcgg
tgcctgatcaagagccccgagcgcctggcggaggtgaactacgagggccggctggaggcc
gtgtcccgcaggcagggcgcccgcttcaaggagtaccgccccgagaccggctcctgggtc
ttcaaggtagcacatttttccaagtatggcttacaagattcagatgaggaagaggaagat
catccttccaaagtggacaccaagaagctaaagaccacacctgtgccacccccagggcac
ctgctgccccagcagatggccctgaacggcaaaccagcgcccccggctcagcccccggag
ctggagcagctgggcagggtggtggagctggacagcgacatggcagacatcacccaggag
ctggcccacgagcccctggcagaggagctggccgaggagcaggaggcggtgccggcgtcc
acgcacatcgcgtccacccagggcatcaacccctacgtgctgcagatcatgaaagcttcc
ttgcttgctgatgatgatgacctggatttgatcctggattatcctgggaagccgcttgtc
aagatggagacttcccaagagatctgctccccaaggcttcccatttcaaaatcacaagga
cagaaaagacactcagctgccgggctgctgcaatccaagctggccggtgtccttttgcag
gccccgagccccgtggcagatgccaaggccccgcgggctctgggcagtcccccctcggcc
gcgctctggtctccgctggcctcggcgttctcggtgcccgcggcgctgcccgaggcgccc
gtgaagacggtcggggcgcgcaggcagcgcgggctcgtccctctggagaggtccatcacc
tacggcaaagggaagctcctgatggacatgggactcttcatgggccgctccttccgtgtc
ggatgggggcccaactggacgctggtcaattgtggagatcagctgagtggctcgagcgaa
gcggaagacgctcaggttgagcccgtggaatatgggttcctgccgactcccgtcgctccc
aaatcactcacagaatcccctttcaaagttcatgtggaaaagttgagcttggaacaatgg
aaggtggacagagacaaggagctgtatctcacccctctggagatcaagctgaagcacagc
actgtccatatggatgaggcctgtcctctcctggcccccaaccccggagtctctgctatc
catgactatgctgactgggccaggaaagcatctgaggatcctgctgtggcagagaccgtt
gtgaagcactggtgcttggcctggacgctgtgcgaggccatttggggcaagctgaaggag
ctggaggccagcctggaggagcccggcgagtacgtgctggcgctggagcgccgcagggcc
ttctcgcgctggctgtcggagacggcagccgcgcgcatcgaggaggaggtgtccctggcc
cggcacggcagccacgtcgaggccgtgttcagctgcctcacgggcaagaggatcggcgag
gcctgcaggctggcacagcaggcaggtgaccaccggctggcgctgctgctgtcacagctg
gcgggcagccagcccgtgcgggacctgctgaccctgcagctggtggactggcaccgcctg
cacagcgaccgcttcatccaggaggagcgcctgcgcctcttcgccctgctcgcggggaaa
ccggtgtggcagctctccgagaggatcagcgtcaacgtgtgctcgctgctggactggaag
cgctgcgtggccgtgcacctctggtacctgctgccccccacggcctccatctccaaggct
ctggccatgtacgagtcggcctttcagaacacctcagagtgcgaaaaatatgcctgctgt
cctctgcctccttacctggaggattctgggtgtgtcattgaagaagatgacaatggagga
aggcccctgagagatgtctgcttccatctgttgaagctctacagtgataggtcctatgag
cttgaccagctgctggatcccaggagtgtcacctctgacccgctggatttccgcctcagc
tggcacctgtgggaggtgctgcgggccctgaactactcccacctgtcccagcagagctgg
ggggtgctgaacaccagctatgctgcgcagctggagagcgaggggctgtgggaatgggcc
gtgttcgtgatgctgcacgagcctgacacgcagctgcgggagaaggccgtgcgggagctg
ctgagccggcactgcgccctcgccgacagccccgagtcgtgggccaaggagacgttcctg
acgcagcgcctctgcgtccccccgcgctggatccacgaggccaaggccgtccgcgccagg
atggagggtgacaggcacaaagaggcccttttcctcttcaaggctggccactggaaccag
tgccacaagctggttgtcaggcacttggcctcagatgcaattatcaacgagaactacaag
tacctgaaaggattcctggaggacctggcgcccccggagcgcagcgcgctcatccaggac
tgggagctggcggggctggtctacctcgactacatccgtgtgaacgagatgctggacagg
attcagcagctggatgtttccacctacgagctggagcggttacacaccaaagtgacgtcc
ctgtgcaacaggatagagcagctgcagtgccacaacgccaaggaccgcctggctcagtca
gacatggccaagcgcgtggccaacgtgctgcgggcggtgctgagcctgcagcagggcccc
gaggccggccccgaggcggccgagccgcgcgtgcccctgcgcctgctggccccgcacatc
ggccgcctgcccatgcccgaggactacgcgctggaggagctgcgcggcctcacccaggcc
tacctgcgcgagctggcgctggccgcgcactga
DBGET
integrated database retrieval system
