Hirundo rustica (Barn swallow): 120748678
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Entry
120748678 CDS
T09369
Symbol
SOX21
Name
(RefSeq) transcription factor SOX-21
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120748678 (SOX21)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120748678 (SOX21)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
TGF_beta_GS
Motif
Other DBs
NCBI-GeneID:
120748678
NCBI-ProteinID:
XP_039911230
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Position
2:complement(77084356..77087118)
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AA seq
281 aa
AA seq
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MSKPVDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLLKKDKFAFPVPYGLGGVADHEHPHGLKAGGLHAG
AAGGLVPESLLANPEKAAAAAAAAAARVFFPQSAAAAAAAAAAAAASSPYSLLDLGSKMA
EISSSSSSSGSGLPYASSLGYPGAGGAGAFHGAAAAAAAAAAAAGGHTHSHPSPGNPGYM
IPCNCSAWPGPGLQPPLAYILLPGMGKPQLDPYPAAYAAAL
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagccggtggatcacgtcaagaggccgatgaacgccttcatggtgtggtcgcgg
gcgcagcgacggaagatggcccaagagaaccccaagatgcacaactcggagatcagcaag
cgcctgggagctgagtggaagctgctgaccgagtcggagaagcggcccttcatcgacgag
gccaaacggctgcgggccatgcacatgaaggagcaccccgactacaagtaccggcctcgg
cggaagcccaagacgctgctcaagaaggacaagttcgctttccccgtgccctacgggctg
ggcggcgtggcggaccacgagcacccgcacgggctgaaggcgggcgggctgcatgccggc
gcggccggcgggctggtgcccgagtcgctcctggccaaccccgagaaggcggcagccgcc
gcggccgccgctgccgcccgcgtcttcttcccccagtcggccgccgccgctgccgccgcc
gccgccgcggccgccgccagcagcccctactccctgctggacttgggctccaaaatggcc
gagatctcatcctcctcctcttcctcgggctccgggctgccctacgcctcctcgctgggc
taccccggcgccggcggggcgggcgccttccacggggccgccgccgccgccgccgccgct
gccgccgccgccggggggcacacgcactcgcacccgtcgcccggtaacccgggctacatg
atcccctgcaactgcagcgcctggcccggcccggggctgcagccgccgctggcctacatc
ctcctgccgggcatgggcaagccccagctggacccttatcccgcagcctacgccgcggcg
ctatga
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