Hirundo rustica (Barn swallow): 120748724
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Entry
120748724 CDS
T09369
Symbol
AFF3
Name
(RefSeq) AF4/FMR2 family member 3 isoform X1
KO
K15195
AF4/FMR2 family member 3
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120748724 (AFF3)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120748724 (AFF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
BRD4_CDT
Motif
Other DBs
NCBI-GeneID:
120748724
NCBI-ProteinID:
XP_039911362
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Position
2:complement(87775755..88104842)
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AA seq
1254 aa
AA seq
DB search
MEKLQTISSKELGDHEQLTVYEPDRNVLRRKEWERRNQEAQQDNGAFNTSYSLFSEPYKT
NKGDELSNRIQNTLGNYDEMKDLLTDRSNQSHLVGVPKPGVPQTSLPKTDEHLIADLRQP
PPPPISSTTSSAPASLAAQQSKSTTMGWQKAGHNATSDGQQRAGKHGHRSLESHKGDFKL
GNQKTNLEKLKRYASSPTSSSSSSSSSSSSSSSSTSSSTSSSSSSSNSAQQNSLRATLGD
NINRVQQPAKLSCSSEGGTQVQERSAKHGAGHCVQNFPPSLASKPSLGQQKPTAYVRPMD
GQDQAPDESPKLKLPAETTKSYRGVPSSKPDSARTKSKITKFSIPKQEEDSGTGDNSCIE
EILREMTHSWPPPLSAIHTPGKADQSKFPFPNKESQQGSTGHSNTRKSDVEPKTPEKSAT
HTSMLEDDLKLSSDEEENDQQAAQRSALRVLSDSLVVPQSSARASGLSSKGSSSSSSSES
ETSSESDSESESSSSESDGSKPSHYSSPEPEPPSSNKWQLDKWLNKVTPHKAPILTHHDG
PALEAHPYYGRVKVERQEGQKTAAEGPAEHRSEESRTAAAAGDGPRPRTANKAPGSKGSR
QKSPLAADGGPPRRAAGKKAPRRAERTPAGDGPPCPSAEEPPRSHGFPESASAEAPRARP
GGGGCRAGHRREPRSAAAGEKRRARGPSKTAPKSKEFIETESSSSSSSSDSGSESEREER
PLPKAPAAAGPEPRGAKDAGSGTASKPHGGCSAFGSINARTSSEIAKELEEQFYTLVPFG
RNELLSPLKDSDEVKSLWVNIDLALLSRIPERLPEEPLAMSAGANQAASFPQGSSAEPPA
EKGLPKSRRKRKCENEEECRDIKKNHLERESSSRLAASAQSITTANHCSMNENSLAIPIN
KNEKMLRSPVSPLSDASKHKYSSDDLTSSSRPNGSSLLPSISSSKKHKGEIQSQPHPGDF
NKAIHMNSENVLPCNKPQFQTEPWSPLSTTPRDCRRTKLIFDDIPRNADYFMQEAKRKKH
KADAMVEKFGKALNYAEAALSFIECGNAMEQGPMESKSPYTMYSETVELIRYAVRLKTHS
GPNATPEDKQLVALCYRCLALLYWRMFRLKRDHAVKYSKALIEYFKNSSKAAQNPSPWGA
SGKSTGTPSPMSPSPSPVSSVGSQGSTGAPSPSPIISIPQRIHQMAANHVSITNSILHSY
DYWEMADNLAKENRDFFNDLDALMGPITLHSSMEHLVQYTQQGLHWVRNSAHLS
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atggagaagttacagaccatttcctccaaagagctgggtgatcatgagcagctaactgtc
tatgagccagatagaaacgtgctgcgaaggaaggaatgggaaaggaggaatcaggaggcc
cagcaggacaatggcgcgtttaacacgagctattccctcttcagtgaaccgtacaagacg
aacaagggggatgagctttccaatcgcatccagaatacgttgggcaactatgatgaaatg
aaagacttgttaactgaccggtcaaaccagagccatcttgttggggttccaaagcctggg
gttcctcagacatctctccccaagactgatgaacatcttatcgcagacttgcgacaacca
cctcctcctcctatttccagcactacttcttccgcaccagcatccctagctgcccagcag
agcaaaagtaccacgatgggttggcagaaagctgggcataatgccacttcagatggccag
cagagagcaggaaaacacggacaccggtcactggagtcacacaagggtgatttcaaactg
gggaaccaaaaaaccaatttggagaaactaaaacgctatgcatcgagtcccacctcctcc
tcttcctcctcctcttcctcctcctcttcctcctcctcctccacctcctcctccacctcc
tcttcctcctcctcctccaatagtgcccagcaaaactcgctgagagccacattaggagac
aacatcaacagagtccagcagccagcgaagctcagttgtagctcagaaggaggaactcaa
gtccaagagaggtcagcaaagcatggtgcggggcactgcgtccaaaacttcccaccctct
cttgcttcaaagcccagtctgggtcagcagaagccaacagcttatgtaaggccaatggac
ggtcaagaccaggctcctgatgagtctccaaagctgaagttgccagcagagacaaccaag
tcgtatcggggagttccttccagcaagcctgattcagccaggaccaagtcaaagatcacc
aagttcagcattcctaagcaagaagaagacagtggaacaggagataacagctgcattgaa
gaaatattgcgggagatgacccattcatggcctccaccactgtcagctattcacacacca
ggaaaggcagatcaaagcaagtttcccttcccaaacaaggagtcacaacagggatctaca
ggacacagcaatacaaggaaaagtgatgtggagccaaagaccccagagaaaagcgcaacc
catacatcaatgctagaagatgacctcaagttaagcagtgatgaagaggagaatgaccag
caggcagcacagagatctgctctccgcgttctatctgacagcctggtggtgccgcagtcc
agtgcccgagcctcgggactctccagcaaggggtcgagcagcagcagctccagtgaatcc
gagaccagctcagagtccgactccgagagcgaaagcagctccagcgagagcgacggcagc
aagccctcgcattactccagcccagagcccgagccgccctcgtccaacaagtggcagctg
gacaagtggctgaacaaagtcacccctcacaaagcacccatcctaacccaccacgatggc
ccggcgctggaagcccatccctactacggccgcgtgaaggtagagcggcaggaaggacag
aagaccgcggctgagggcccggccgagcaccgcagtgaggagagccgcaccgccgccgcc
gccggggacgggccgcggcccaggaccgccaacaaagcgccaggcagcaagggcagccgg
cagaagtcacccctcgctgccgacggcgggccgccgaggagggcggcggggaagaaggca
ccgcggcgagccgagaggacccccgccggagacgggcccccctgccccagcgcagaggag
cccccccggagccacggcttccctgaaagcgcttctgccgaggcgcccagggcccggccc
ggcggcggcggctgcagagcggggcaccgccgggagccccgctcggctgcggctggtgag
aagcgccgggcccgagggcccagcaaaacggcgcccaaatccaaggagttcatcgagacc
gagtcttcgtcctcatcatcctcctccgactcaggctctgagtcggagcgggaggagcgc
ccgctgcccaaggcgccagcggcggccgggcctgagccgcggggtgccaaggacgcgggg
agcggcaccgccagcaaaccccacggcggctgcagtgcctttggctctattaatgccagg
actagtagtgaaatagcaaaggagctggaggaacagttttacaccctggttcctttcggt
aggaatgagctcctgtctcctctgaaagacagtgatgaggtaaagtcgctgtgggtcaac
attgacttggctcttttgtccaggattccagagcgtttgcccgaagaaccgctggccatg
agcgccggagcaaaccaggcggccagcttcccgcagggtagtagtgctgaaccccccgca
gagaagggtttaccgaaatctagaaggaaacgcaagtgtgaaaatgaggaagagtgcaga
gacatcaagaagaaccacctagagagagagagttcttcacgattagctgcctctgcccaa
agcatcacaacagcaaatcactgcagtatgaatgaaaatagcttggcaataccaataaat
aaaaatgagaaaatgcttcggtcacccgtctctcccctctctgatgcatcaaaacacaaa
tattccagcgatgatttaacttcctccagcagacctaatggcagcagtctattaccttca
atctcctccagcaaaaaacataagggtgaaatccaatcgcagccacatcctggagacttc
aataaagcaattcacatgaattccgaaaatgttcttccctgcaataagccacagttccaa
acagagccttggtcacctctgtccaccacacccagggattgcagaagaacaaagcttatc
tttgatgatataccacgcaatgcagattactttatgcaggaagctaaacggaagaagcat
aaagcagatgcaatggtggagaagtttggaaaggcactgaattatgcagaagcagcacta
tcgtttattgagtgtggaaatgcaatggaacaaggcccaatggaatctaaatccccttac
accatgtattcagaaacagttgaactcatcaggtatgcagtgagactaaaaacccactca
ggccccaacgccacgccagaagacaaacagctggtagcattatgttaccgctgcctggcc
cttctgtactggaggatgttccgcctcaagagagaccacgcggtcaagtattcaaaagct
cttattgagtatttcaagaattcatcaaaagctgcccagaacccatctccttggggtgcc
agtggaaagagcacaggaactccatcacctatgtcccctagcccttctccagtcagttct
gtaggatcccaggggagcacaggggccccttccccatctcccatcatcagcatcccgcag
cgcattcatcagatggccgccaaccatgtcagcatcaccaacagcatcctgcacagctat
gactactgggagatggctgacaacctggccaaggaaaacagagatttttttaacgacttg
gatgcattgatgggacctatcaccttgcacagcagtatggagcatttagttcagtacact
caacaaggacttcactgggtgcggaatagcgctcacttgtcataa
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