Hirundo rustica (Barn swallow): 120748763
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Entry
120748763 CDS
T09369
Symbol
PCDH8
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-8
KO
K16499
protocadherin delta 2
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrt04515
]
120748763 (PCDH8)
Cell adhesion molecules [BR:
hrt04515
]
Cadherins
Protocadherins
120748763 (PCDH8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Motif
Other DBs
NCBI-GeneID:
120748763
NCBI-ProteinID:
XP_039911473
LinkDB
All DBs
Position
2:complement(58041352..58045611)
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AA seq
998 aa
AA seq
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MSPLRLLAAACLLALSRCKTVRYRTDEEGAPGTVIGTLADEMPVKAPGEMSFRLMRQFSN
SSLVRVREEDGQLSIGEAGLDRERLCGQAPQCVLAFDVVSCWRERYRLVHVELEVRDIND
NAPRFPHAQMALEVSESAAPGTRLPLEVAVDEDVGSNSIQSFQVSLNSHFGVEAQTRADG
ARCADLVLLQELDRERQPSYTLELVAKDGGSPARSGTATVHVRVLDANDNSPTFAQSSVT
VELPEDAPPGSLLLDLDAADPDEGPNGEVVYAFSSQVPPEARRLFRLDPRSGHLTLEAAV
DYERTRTYELDVRAQDRGASPRAATCTVVMRLTDVNDNAPRISISALRGAASAAGVAYVS
EAAASESFVALVSATDRDSGANGQVRCSLRGHDHFALQRAYEDSYMIVTTAALDRERIPE
YNLTVVAEDLGSPPFKTVRQYTVRVSDENDNAPLFAKPLYEVAVPENNPPGAYITTVVAR
DPDLGHNGKVTYRLLETQVMGAPISTYVSVDPATGAIYALRTFNYEILKQLDLRIQATDG
GSPQLSSSTIVKVRMVDQNDNPPVIIHPVLTNGTVEIGVSSKTSRDSLVAQIKARDADDG
ANAELTFAFLEESQQDLFAINPSTGDIVLRGDLSEELGQLFKVILTVTDNGRPPLATTAT
VNFLVTATAPSSIQDIAKPSSWEGKALQWDIPLIVIIVLAGSCTLLLVAIITIATTCNRR
KKGNNIKNNTALKDQIDISHLEKGHQEEGGQRGNMFEVRTFPSKTSFTSPDPSPAAEEIS
TTESGSDSTCLYEGQKRLRGQSGEQGFAATPSYNKEPAPPVAIWKGHSFNTISGREAEKF
SGKDSGKGDSDFNDSDSDISGDALKKDLITHMQNGLWACTAECKILGHSDRCWSPSCGRA
NPHPSPHPSAPLSTFCKSTSLPRDPLRRDNFYQAQLPKTVGLQSVYEKVLHRDFDRTITL
LSPPRPARLPDLQEIGVPLFPAPSTRYLGPQTETTEKA
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgagccccctgcggctgctggccgccgcctgcctgctggccctgtcccgctgcaagacg
gtgaggtatcgcaccgacgaggagggcgcgccgggcacggtgatcggtactctggccgac
gagatgcccgtgaaggcgccgggagagatgagctttcgcctgatgcggcagttcagcaac
agttcgctggtgcgggtgcgggaggaggacgggcagctgagcatcggtgaagcggggctg
gaccgggagcggctgtgcggccaagccccccagtgcgtcctggccttcgacgtggtgagc
tgctggcgggagcgctaccgcctggtgcacgtggagctggaggtgcgtgacatcaatgac
aacgcaccgcgcttcccccatgcccagatggcgctggaggtgtcggagagtgccgcgccc
ggcactcgcctcccactggaggtggctgtggatgaggatgtgggctccaactccatccag
agcttccaggtctccctcaacagccactttggtgtggaggcacagacacgagcagatggg
gcacgttgtgctgacctggtgctgctccaggaactggaccgcgagcgccagccctcctac
accctggagctggtagccaaggatggtggcagtccagcacgctcgggcacagccaccgtg
cacgtccgcgtcctcgacgccaatgacaacagtccgacctttgcccagagctcggtcacg
gtggagttgcccgaggatgcgccgcccggctccctgctgctcgatctggatgctgctgat
cctgacgagggccccaatggcgaggtggtctatgccttcagcagccaggtgccccctgag
gcacgtcggctcttccgcctcgacccgcgctcgggccacctcacattggaggctgccgtg
gactacgagcgcacccgcacctacgagctggacgtgcgtgcccaggaccgcggtgccagc
ccccgtgccgccacctgcaccgtcgtcatgcgcctcaccgacgtcaacgacaacgctccg
cgcatcagcatcagcgccctccgtggcgctgccagtgctgccggcgtggcctatgtcagc
gaggcggcagccagtgagagcttcgtggccctcgtcagcgctacagaccgcgactcaggc
gccaacggacaggtgcgctgcagcctccgtggccacgaccacttcgccctgcagcgagcc
tatgaggacagctacatgatcgtcaccacggcggcgctggaccgtgagcgcatccccgag
tacaacctcaccgtggtggctgaggacctgggctcgccgcccttcaagactgtccgccag
tacacagtgcgggtgagcgatgagaatgacaacgcaccgctcttcgccaagcccctctat
gaggtggctgtaccggagaacaaccccccgggcgcctacatcaccacagtggtggctcgt
gaccctgatcttggccacaacggtaaggtcacctaccggctcctggagacgcaggtcatg
ggtgcccccatctccacctacgtctcggtagaccccgccaccggggccatctatgccctc
aggacattcaactacgagatcctcaagcagctggacctgaggatccaggccactgatggt
ggctccccgcagctctccagcagcaccattgtcaaagtgagaatggtggaccagaacgac
aaccctcccgtcatcatccacccagtgctcaccaatgggactgtggaaatcggtgtgtcc
agcaagacctcccgtgactccctggtggcccaaatcaaagctcgagatgcagatgatggg
gccaatgccgagctcacctttgccttcctggaagagtcccagcaggaccttttcgccatc
aaccccagcactggggacattgtgctgcggggtgacctctccgaagagctgggacagcta
ttcaaggtcatcctcactgtgacagacaatggcagacctcccctggccacaactgccaca
gtcaacttcctggtgaccgccactgctccatccagtatccaagacatagccaagcccagc
tcctgggaaggaaaggctttgcagtgggacatccctctgatcgtgatcattgtcctggca
ggcagctgcaccctcctcctggtggctataatcaccatcgccaccacctgcaacaggcgc
aagaaggggaacaacatcaaaaacaacactgccttgaaggaccaaatagacatctcccac
ctggagaagggccatcaggaggagggcggccagagggggaacatgtttgaggtacgaacc
tttcccagcaaaacctctttcaccagccccgacccatctccagctgcagaagagatctcc
accactgagagcggcagcgacagcacttgcctctatgagggtcagaagaggctgagggga
cagagtggggagcagggttttgctgccactccgagctacaacaaagagcctgctcccccc
gtagccatttggaagggacactccttcaacactatctccggccgggaggcagagaagttc
agtggcaaagacagcggcaaaggtgacagtgattttaacgacagtgactcagatatcagc
ggagatgccctgaagaaagatctcatcacacacatgcagaacggtctgtgggcatgcact
gctgaatgcaagatcctggggcactccgaccgctgctggagcccctcctgtggccgagcc
aaccctcacccctctccacatccctcagcacccctctccaccttctgcaagagcacgtcc
ttgcccagggacccccttcgcagggacaacttttatcaagcccagctgcccaaaacagtc
gggcttcagagcgtctatgagaaggtgctgcacagggactttgaccggacaatcacgctc
ctctccccgccgcgccctgcacggctccccgaccttcaggagatcggggtgccccttttc
ccagccccctcaactagatacctcggcccccagacggagacgactgagaaggcgtag
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