Hirundo rustica (Barn swallow): 120748798
Help
Entry
120748798 CDS
T09369
Symbol
USP16
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16 isoform X1
KO
K11844
ubiquitin carboxyl-terminal hydrolase 16/45 [EC:
3.4.19.12
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120748798 (USP16)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hrt01002
]
120748798 (USP16)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120748798 (USP16)
Enzymes [BR:
hrt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120748798 (USP16)
Peptidases and inhibitors [BR:
hrt01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120748798 (USP16)
Ubiquitin system [BR:
hrt04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120748798 (USP16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
120748798
NCBI-ProteinID:
XP_039911548
LinkDB
All DBs
Position
2:16917898..16936409
Genome browser
AA seq
816 aa
AA seq
DB search
MGKKRIKGKTAQSDESLDILKPVCKHIRKGLDQGHVRRALQNVEWRVCQDCKADSKTQEK
AEEDTDEGTSIWLCLKCGHRGCDRNSPDQHALKHYQTPRSDPHCLVLSLDNWSVWCYLCD
NEVPYKTSSLLGQTVDFVRKQVGIDSSHAEKQENKEVENKKVEKDSKNEQEKEVSLKEEN
SHSTANGEITVKGLSNLGNTCFFNAVMQNLSQTPVLRELLKEAKMPGTTVKIEAPELCME
PQLIKLDQPGPLTLAMHQFVTEMQETKKGVVTPKELFAQVCKKAIRFKGYQQQDSHELLR
YLLDGMRAEEIQQITVGILKALSDSNKQNEEELKTKIKEYEKKKGIQSFVDRIFGGELTS
TIMCEECRTVSLVHESFLDLSLPVLDVQKVKITKRENIKKNKEKESEHEEDEINDHYIKQ
KDEPPATSKHLQKKAKKQAKKQAKSQRQQQKRQGRILTHLGATKQPETDVEYNQESETEI
SSETLDKKQEEKSSHYCKDHCLTQKDLSIQRNNTEIESWHENTEKPEQECEENKSLTDLC
VEGLDSPMKFVNGLDNLSLKEEDDDNEDEEELAVDFSKLHLGASESDMSTLDGLVPNKTC
EVSTDDPEKAFCTLANREELNPEEDSIHHCLYQFTRNETLTETNKLLCDVCTQRHCGPKN
NIKSEKKYVYTNAKKQMLVSLAPPVLTLHLKRFQHAGFNLQKVNRHIKFPEVIDLAPFCT
AKCKNVAEGNTKVLYSLYGVVEHSGTMRSGHYTAYVKMRAMNNHLSDLVLRGQFQALETE
PVKGQWFHISDTHVQPVSVSKVLSSQAYLLFYERLL
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagaaacgcatcaaaggcaaaactgcacagtctgatgagtctctggatatactg
aaacctgtgtgcaagcatattcgtaaaggactggaccaagggcatgtgagaagggcactg
cagaatgtggagtggcgtgtttgtcaggactgcaaggcagacagtaagacacaagagaag
gctgaggaagacactgatgaaggcacttcgatatggttatgcctcaaatgtggccatagg
ggctgtgacagaaattctccagaccagcatgctttaaagcattatcaaacaccaagatca
gatccccactgtttggttctcagtttggacaactggagtgtgtggtgctacctgtgtgat
aatgaagttccatataaaacttcaagccttttgggccagactgtggattttgttagaaag
caagttggtattgactcatcacatgcagaaaaacaagagaacaaagaagttgaaaataaa
aaagtagaaaaagacagcaaaaatgagcaagaaaaagaagtttcacttaaagaagaaaat
tctcattcaactgctaatggagaaataactgtgaaaggacttagtaacttggggaatacg
tgtttctttaatgcagtgatgcagaatttatcacaaactccagtcctgagggagctgctt
aaagaagctaaaatgcctggcacaacagttaaaatcgaggcacctgagctatgcatggaa
cctcagctaataaaactagatcagccaggccctttaacactagccatgcatcagtttgtg
acagaaatgcaagagaccaaaaaaggggtagtgactcctaaggaactttttgctcaggtt
tgtaaaaaagcaatacgattcaaaggttaccagcagcaagacagtcacgaattgcttcgt
tacttacttgatggaatgagagcagaggaaatccagcaaataactgttggaatactaaag
gcactgagtgattctaacaaacaaaatgaggaagaacttaaaacgaaaattaaagaatac
gagaagaaaaagggaatacaaagttttgtagatcgaatctttggtggagaattaaccagc
acaattatgtgtgaggaatgcagaactgtatccttggtccatgagtctttccttgatttg
tcacttcctgtactagatgttcagaaagtgaaaattacaaagcgagaaaacattaaaaaa
aacaaagaaaaggaatctgaacatgaagaggacgaaatcaatgaccattacattaagcag
aaagatgagccccctgctacaagtaagcaccttcagaaaaaagcgaagaaacaggccaaa
aaacaagccaagagccaacgccagcagcaaaaacgtcaaggaaggatcttgacacatctc
ggcgcaaccaaacagccagagacagatgtcgagtacaaccaagaatcagagactgaaata
agctctgaaactcttgataagaagcaagaagagaaatcatcacattattgcaaagatcac
tgcttaactcaaaaagatttgagtatacagagaaataatacagaaattgagagctggcat
gaaaatacagaaaagccagaacaagaatgtgaagaaaacaagtctctcacggatctctgt
gtggagggcttagattctcctatgaagtttgtcaatggccttgacaatctgtctttgaaa
gaggaggatgatgacaatgaagatgaggaagagcttgctgtggacttttcaaaactccac
ttgggtgccagtgaatctgacatgagtaccttggatggccttgttcctaacaagacatgc
gaagtatctacagatgaccctgaaaaggcattttgtactctggcaaacagggaagagctg
aaccctgaggaagattcaatccatcactgtttgtatcaatttacccgtaatgaaacactt
actgagacgaataaacttctgtgtgatgtgtgtacacaaaggcattgtggaccaaagaac
aacataaaaagtgaaaagaagtatgtttatactaatgccaaaaagcagatgctcgtctct
ctagctcctccagttttaacccttcacttaaagaggtttcagcacgctggatttaatctg
cagaaggttaacaggcatatcaagttcccagaagtgatagacttggctcctttctgtaca
gctaaatgtaaaaatgtggctgaagggaatacaaaggtcttgtactctctctatggagtt
gtcgaacacagtggaacaatgaggtctgggcactacacggcctatgttaaaatgagagct
atgaacaaccatctctctgatcttgtccttcgaggacaatttcaagctttagaaactgag
ccggtcaaaggtcagtggttccacatcagcgatacccacgtacaacctgtctctgtgtcc
aaggtgctgagctcccaagcctatcttctgttctatgagaggctgctgtaa
DBGET
integrated database retrieval system
