Hirundo rustica (Barn swallow): 120748996 Help Entry 120748996         CDS       T09369                                  Symbol DCHS1 Name (RefSeq) protocadherin-16   KO K16507   protocadherin-16/23 Organism hrt  Hirundo rustica (Barn swallow) Brite KEGG Orthology (KO) [BR:hrt00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:hrt04515]     120748996 (DCHS1) Cell adhesion molecules [BR:hrt04515]  Cadherins   Cadherin related    120748996 (DCHS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th RET_CLD1 Cadherin_4 PepSY Sharpin_PH CADH_Y-type_LIR Motif Other DBs NCBI-GeneID:  120748996 NCBI-ProteinID:  XP_039911965 LinkDB All DBs Position 2:118615289..118656622 Genome browser AA seq 3266 aa AA seqDB search MERLKRSTMLLLELLILEGLRAGMGSAVLGTLDLQIDEEQPAGTIIGDISAGLPPETSAY MYFISAQEGSGVSTDLGIDENTGIIKTARVLDRETRDRYSFIAVTPEGITVEVNIQVNDI NDHAPAFPKQHSTFQIPEHTPIGSRFPLDPAFDADSGLLNTQGYMIKGGNVGQAFRLETR RGPNGVLYLDLVVSNVLDRENRSSYSLLLEAYDGGSPPRSTQMTLDVSIQDINDNAPSFN QSRYHTLISENLKPGSSILQVFASDADEGDNGDVIYEINRRQSDPDQYFTIDARTGVIKL NKGLDYEVRKVHELVVQARDKAVHPEVTTAFVTIHVRDYNDNQPTMTIIFLSEDGSPQIS EGAQPGQYVARISVSDPDYGEYSNVNVTLEGGDGKFALTTKDNIIYLICVDQLLDREERD SYDLRVTATDSGTPPLRAESAFVLQVMDVNDNPPLFDQQEYKQSIPEVVYPGSFVLQVTA RDKDQGPNGEVRYSILHDRDTHSSWFTIDPATGIITTAAPLDYEKDPQPQLTVLATDRGT PALSSSAVVRVALQDVNDNEPVFRSNFYNVSLKENTPIGTCFLQVTATDADSGAFGSLSY SIGSGIGSIVPTQFSIDKHSGQLCTVQPLDRDEGTSAYDFTITAVDGGGLNSMVYVKVFL EDTNDNRPVFYPLEYAASISTQSMPGTAVLRVTAHDKDEGLNGRVTYRIVRGNSPPLFSL NKDTGVISLSWSLSGKANTLVQLVISAQDGGGLQTQPNARVNISIVEGTVSPPVFEQAQY FFSVPEDMPQGASVGAVQAQNPPGHADDIFYSISSGDPHGYFSIDSASGQLRASLPLDHE SQSVLILDVQARSGSPPAYSNTRVKISISDVNDNVPAFPAPSDSILLPEATEPGTTVYTV QAEDRDSGANGQVTFELVSGGEGTFGVERASGAVRLLGALQYEAISAYSLAIVARDSGIP QLSSTFTLLVHVQAEDDNGPIFDTLTYRVEVQEGVPVSTRFLQVRALAHDVESTALTYHL RADGDAASFGIVPESGWLYVKSALDRETRDLYVLTVLASVGGTGAVADTRKTGTSTVRIS VTDENDNSPRLSEERYFFTVSENRAPGSSVGRVMASDRDAGQNSRLTYRLLQPDPNFLIH TQTGEVSTKHSLDREQQSSFQLLVIVQDGGAPPRSATGTIYVTVLDENDNAPAFLHVGSG QELTVQVLEEKPSGLLVASLQAKDPDEGENGTITYSLIGAWAERFTLHVATGELRTATVL RRTDRAEYIFTVTASDRGAVPRSTSAIVRVQVLPSSRVLPRPDTTVLTLHPLEGVKPGSV IGSVAPLDAPARGQLTYTVVGGGGDGTFVVDSTTGEIYAARELDYEAGARHVLQVSAEDT QHGYPSSRLVLVHIHVQDCNDQAPTFPEDPITIVVPENAQAGSSIFTFQALDGDGVGPNS QVRYALLHLEPPGAPFQLDSRSGQLTLHQRLDREAAASFLLVVEATDQARNVSQRRSAAV TARVFVTDENDNAPVFLSPATVSVMEDQPTGFVALHVVAQDSDLGENGRVSYSLRAGNGD GRFHLNPSTGALSIVRALNREEVAQHNLTVVATDHGFPRLSATQLLSVLVLDVNDEAPAF EKPEYEAHIMENLPAGSPVLQVLATDRDLGANGQVVYGGLSGGPFSIHPQTGLIVTTRPL DREEQEQHVLTVYARDAGLPPSLTKATVWITVGDENDHAPHLESESCSVEVPENQSRVAL YTLRATDPDGGENGRLEYRVAGGDPGQDFSLDPVSGVLSTAHPLDREQIASYSLIVVVQD HGSPPRSATMSVTVQVLDLNDNAPSFAQASYTVEVPEDLPVGALVLQLVAEDPDEGTNGQ VSYYLGNESLGMFQVEPQSGRIRSAQALDRERQPTYSFLAKAVDSAPWEPKSTAVRVTVV VQDVNDHIPAFLHSPLTVNLSHHTPLKQVVATMRAEDRDAGANASILYRFASPSSAFAIN SYTGDIQLLQPLGSLSQRQRTLFVLAMDLGQPALSSTGVVVIHVQEEPYRGLRFPRSTSD VALAENAAPGTEVASVQAMHTGGSSGHITYSIISGNERNTFLIQPSSGAISVQDSSSLDF EASSRLRLVIQAETAASFGFMAINLNLQDVNDNLPRFQLQNYVAFIWESQSYDSPVIQVL ADDLDQGANGQVTYAINQSLPMPGLYHIDPQTGTITTAAILDREIWSQTRLVVTAMDRGT PPLMGSATLTVVVMDINDNSPTIPVPWEIRVPENTLLGTQIAQLTGNDVDSGPALSYTLL LEGDAADTFGVLRYGGHIALTGPLDHEQRSRYTLTLRASDTRHETEANLTVLVEDVNDNV PTFTQVFYQVLLPEHTPAGSVILTVSATDPDSGSNGDITFHLAVPSPDVAIDPSNGTLFT TRQVEFNASQPTLDLVVEARDHGSPSLSSWATVQLQVLDVNDHSPRFQEPCYNASVPEDL RPGTTVLTLEAGDADLSRENAGFDYTIVSGNGGNAFQVESRVARAGGQLRTQGALVLVES LDFEAIPVYNLTVAASDRGLPQRSATVPVLITVQDVNDNPPVFTRAEYRAAVSEAALPGT ELLRVAAHDADSGPRGRVHYTISSGDQHGLFQLHESTGALSLVRPLDREAQALHTLVVRA TDVPGGHFALVPVAIEVKDINDNKPYFPVEVLSASIRENLPPGTLVTTLRAVDADTGAFG ELRYVVLEQSVGDPTMGDGRDAFAVNGSSGELRSRLTFDYERAKAFQLLVRATDAGNASA TVTVRVLVTGEDEYDPIFLSPSFNFEVPEGARKGQTIGRVLATDEDEGADGVVLYTLAKP SPYFAINQTTGSIYLRVDSQPQAGAGRAKREPREMSLEVQARSPLPASRVASAQVTIDVT HTSFGLAPDLNLLLVAVAASLGVVVVLAAVAIVLALVRSRQRRGHKKAEGEGALARAQSG SLQKLGCEEPALPGAEHIYHQALPGYGTEPAGPYTRGGSLDPSHSSGRGSAEAAEDDEIR MINEYPRVASITASMQEHIAARGPDSGIQQDADQLSDISCEPAALESAQWFKSKKGSGLL LPGPPLQLYREEGGGSAFLGVRCGLSVSSQPQDYAFPEDGKPSVEGSLTAIVASDEELRG SYNWDYLLNWCPQFQPLASVFTEIARLKDESSLRKPFPAKPKAEPKPRIDPPPLITSVAH PGAKSVPPKPPPGRTFPHPSSLRRSPISHEGSISSSAMSPSFSPSLSPLAARSPVVSPFG ISQGPSASTISAEHSLEPPEEAELRI NT seq 9801 nt NT seq  +upstreamnt  +downstreamnt atggagcgattgaagaggtcaacaatgcttctgctggagctgcttattcttgagggcctg agagcagggatgggctcagctgtcctgggcaccctggatctacaaatagatgaggagcag ccggctggcaccatcattggggacatcagtgctggcctaccccctgaaactagtgcctac atgtatttcatctcagcacaggagggcagtggtgtctccactgatttggggatagatgag aatactgggatcatcaaaacagctcgtgtcctggaccgggagactcgagaccgctacagc ttcatcgctgtcaccccggagggcatcacggtagaagtgaacatccaagtgaatgacatc aatgaccatgccccagcatttcccaaacagcacagcacctttcagatcccagagcacacc cccattggcagcaggtttcccttggacccagcctttgatgctgacagtggcctcctgaac acacaaggctatatgattaagggagggaatgtggggcaggccttccgcctggaaacgcgt cgaggacccaatggggtgctgtatttggacctggtggttagcaacgttctggatcgggag aaccgttcgtcatactcactgctgttggaagcctacgatggtggttctcctccccggagc acccagatgacgctggatgtgtccattcaggacatcaacgacaatgctcccagcttcaac cagagccgctatcatacactcatttcagagaatctgaaacctggcagcagcatcctgcag gtctttgcctctgacgcagatgaaggtgacaatggggatgtgatttatgagatcaaccga cggcagagcgaccctgaccagtacttcaccattgatgcccggactggagtcatcaagctc aacaagggtctggactatgaagtaaggaaggtgcatgagctggtggtgcaggcaagggat aaggctgtccatcctgaggtcaccacagcgtttgtcactatccacgtgcgtgactacaat gacaaccagcccaccatgactatcatctttctgagtgaggatggctccccacagatctcc gagggagcccagcccggacagtatgtggcacgcatttctgtttccgatccagactatgga gagtactctaatgtcaatgtcacactggagggaggagatggcaagtttgccctcactacc aaggacaacatcatctatctgatctgtgtggaccagcttctggatcgggaagaaagagac tcctatgatctgcgagtgacagctactgactcaggaacacccccgctccgggcagaatca gcctttgtgctgcaggtgatggatgttaatgacaatcctccgctctttgaccagcaggag tacaagcagagcatccctgaggtggtgtacccaggcagctttgtcctgcaggtgacagct cgtgacaaggaccagggtcccaatggggaggtgaggtacagcattctgcatgaccgtgac acccactccagctggtttaccattgaccctgccactggcatcatcaccactgctgcccca ctggattatgagaaggaccctcagcctcagctcactgtgctggccacagaccggggaacc cctgccctctcttcctcagctgtggtgcgtgtggccttgcaggacgtcaatgacaatgag ccagtgttcaggagtaacttctacaatgtgtccctgaaagagaacacccctattgggacc tgcttcttgcaggtgacagccacagatgcagacagtggtgcatttggctccctttcctac tccatcggctctggcatcggcagcattgtccccacacagttcagcattgacaagcactca ggtcagctgtgcacggtgcagcccctggaccgtgatgagggcacgtctgcctacgacttc accatcactgctgtggatgggggcggcctgaactccatggtgtacgtgaaggtgttcttg gaggacacgaatgacaaccggccagtgttttatccactggagtacgctgccagcatcagc acacagagcatgccagggacagccgtgctgcgtgtcactgcccatgacaaggacgagggg ctgaatgggagagtgacataccgaattgtccggggaaactcgcccccgctcttctccctc aacaaggacacaggtgtcatctctctgtcatggtctctgagtggcaaagccaacaccctg gtgcagctggtgatctctgctcaggatggggggggcctgcagacacagccgaatgcccgg gtaaacatcagcattgtggagggcacagtctcaccccctgtctttgagcaagctcaatac ttcttcagcgtgcccgaggacatgccacagggtgccagtgtgggggctgtccaggcccag aacccaccaggtcatgctgatgacatcttctattccatctcctccggggaccctcatggc tatttctccatcgactcggcctcggggcagctgcgcgccagcctgcctctggatcacgag tcccagtcggttctcatcctggatgtccaggcccggagcggttcaccccctgcctacagc aacacacgtgtgaagatctccatatcagacgtgaatgataatgtgccagcattcccagct ccttccgactccatcttgctgccagaggccacggaacctgggactacggtctacaccgtg caggctgaggaccgtgacagtggtgccaatggacaggtgacctttgagctggtgtcgggg ggcgagggcacctttggtgtggagcgtgcctcaggggcagtgcggctccttggggccctg cagtacgaggccatctcggcctacagcctggccatcgtggcccgggacagcggcattccg cagctcagctccaccttcacgctgctggtgcacgtacaagccgaggacgacaacgggccc atctttgacactctcacctaccgtgtggaggtgcaggagggtgttcccgtctccacccgc ttccttcaggtgagggccctggcgcacgatgtcgaatccacagcccttacctaccacctg cgtgcggatggggatgctgccagctttggcatcgtgcccgaaagcggctggctgtacgtc aagagtgccctggaccgggagacgcgggacttatatgtgctgacagtgctggcctcggtg ggaggcactggcgctgtggcggacacgcggaaaactggcaccagcaccgtgcggatcagc gtcaccgatgagaatgacaacagccctcggctgagcgaggagcggtacttcttcaccgtg tctgagaatcgggctcctggcagcagcgtggggagggtgatggcaagcgacagggacgcc gggcagaacagccgcctcacctaccgcctgctccagcccgatccaaactttcttatccac acacagacaggagaggtcagcaccaagcacagcttggatcgggagcagcagtccagcttc cagctcctggtgatcgtgcaggatgggggggcaccgccccgcagtgccaccggaaccatc tatgtcaccgtgctggatgagaatgacaacgctcctgctttcctccacgtgggcagtggt caggagctaactgtgcaggtgctggaagagaagccatcgggactgctggtcgcttccctg caggccaaggaccctgacgaaggggagaatgggaccatcacctactcgctgataggagcc tgggcagagcgtttcactctgcacgtggctactggggagctgcggacagccacagttctg cgccggactgaccgtgccgaatacatcttcaccgtgacagccagcgatcgcggcgccgtg cctcgcagcacgtcggccatcgttcgtgtccaggtgttgccatcctcccgtgtgctgcca cggcctgacaccactgtgttgacccttcatcctctcgaaggggtcaagccggggtctgtg atcggttcagtggctcccctggacgcccctgcacgaggacaactgacctacacggtggta ggaggtggtggggatggcacctttgtggtcgatagtacgacaggggagatttatgctgcc cgtgagctggactatgaagctggggcacggcacgtgctccaggtgagcgctgaggacacg cagcacggctatccctccagcaggctggtgctggtccacatccatgtgcaggactgcaat gaccaagcacccaccttccccgaagaccccattaccattgtggtgcctgagaatgcccag gctggctcctccatcttcaccttccaggcgctggatggggatggagtgggccccaacagt caggtgcgctatgctctgctgcacctggagccacccggagcccccttccagctcgacagc cgctcggggcagctgaccctgcaccagcgccttgaccgggaggctgctgcctctttcctg ctggtggtggaggccacagaccaggcccgcaacgtcagccagcgccgctcggctgccgtc acagcccgtgtgtttgtgaccgacgagaacgacaatgcgcccgtcttcctctccccggcc accgtcagcgtcatggaggaccagcccacgggctttgtggcactgcacgtggtggcccag gacagcgatctgggagagaacggacgtgtgagctactccttgcgtgcaggcaatggtgat ggccgcttccacctcaaccccagcactggtgcgctctccattgtgcgggccctgaacagg gaggaggtggcgcagcacaacctgacggtggtggccacggaccatggcttcccccgcctc tccgccacacagctgttgtccgtcctggtgctggatgtcaatgatgaggctcctgccttt gagaaacccgagtatgaagcccacatcatggagaacctgccggccggcagtccagtgctg caggtgctggccacggaccgggatctgggtgccaacggacaggtggtttatgggggtctc tctggggggccgttctccatccacccacagacggggctcattgtcaccacgcgtcccctg gaccgggaggagcaggagcagcatgtgctgacagtctacgcgcgggacgctggcctgccg cccagcctcaccaaggccacggtgtggatcacagtgggggatgagaatgaccatgcaccc cacctggagagcgagtcctgctccgtggaggttcctgagaaccagagccgtgtggcactc tacaccctgcgggccactgatcctgatggtggggagaacggacgcttggaataccgggtg gcaggtggagaccctgggcaggatttcagcctagaccccgtctccggagtcctctccact gcacatcccctcgaccgagagcaaattgcttcctacagcctcattgtagtggtgcaggac cacggctcccccccacgcagtgccaccatgtcggtgactgtgcaggtgttggacctcaat gacaatgcacccagttttgctcaggccagctacacggtggaggtgccggaggatttgcca gttggtgccctggtgctgcagctggtggccgaagacccagatgagggcaccaatgggcag gtctcctactacctgggcaatgagtctctgggcatgttccaggtggagccacagagcggg cgcatccggagcgcgcaggcactggaccgggagcgccagcccacctacagcttcctggcc aaggcagtggactcagcaccatgggagcccaagagcacggccgtgcgtgtcaccgttgtg gtgcaagacgtcaacgaccacattccggccttcctgcacagcccgctcaccgtcaacctg tcccaccacacaccgctcaagcaggtggtggccaccatgagggccgaggacagggatgcg ggtgccaacgcctccatcctgtaccgctttgccagccccagctccgccttcgcaatcaac tcctatacgggggacatccagctgctgcagccccttggctcactcagccagcgccagcgg acgctcttcgtgctggccatggacctggggcagccggcgctctcctccacgggggtagtg gtgatccatgtgcaggaggagccctaccggggcctgcgctttccccgcagcaccagtgac gtggccctggccgaaaatgctgccccaggcactgaggtggcgagtgtccaggccatgcac acagggggctcctcgggacacatcacctacagcatcatcagcggcaacgagaggaacacc ttcctgatccagcccagctcaggtgccatctcagtgcaggactccagtagcttggacttc gaggccagctcccggctgcgcctggtgatccaggcagagactgcagcttcctttggcttt atggccataaacctcaacctccaggatgtgaacgacaacctaccccgcttccagctgcag aactatgtggcgttcatctgggagtcacagagctatgactcacctgtcatccaggtgcta gcagatgatctggaccagggagcaaacgggcaggtgacatatgccatcaaccagtccctg ccaatgccaggcttgtaccacattgaccctcagaccggcaccattaccactgctgccatc ctggacagagagatctggtcccagacccgcttggtggtgacagcgatggacagaggaaca ccaccgctcatgggctcggccacactgaccgtggtggtgatggacatcaatgacaatagc cctaccatcccggtcccctgggagatccgtgtccctgagaacacgctgctggggacgcag atagcccagctgactgggaacgatgtggactcgggccctgcgctctcctacacgctgctg ctcgagggggacgcagcagacaccttcggggtgctgcgctacggtggccacatcgccctg acagggccactggaccatgaacagcgcagccgctacaccctcaccttgcgtgcctctgac acgcgccatgagactgaggccaacctcaccgtccttgtggaggatgtcaatgacaacgtg cccaccttcacccaggttttctaccaggtgctgctgccagagcacacgcctgctggcagt gtcatcctcactgtgagtgcaaccgaccctgactcagggagcaatggggacatcaccttc cacctggctgtgcccagccctgatgttgccatcgaccccagcaatgggaccctcttcacc acccggcaggtggaattcaatgccagccagcccaccctggacctggtggtggaggcccgt gaccacggctctcccagcctctcgtcctgggccacggtgcagctccaggttctggatgtt aatgaccacagcccccgcttccaggagccgtgctacaacgccagcgttcccgaggacctg cgcccaggcaccactgtgctaacgctggaggcgggtgacgccgacctctcccgggagaac gccggctttgactacaccatcgtcagtgggaacggcggcaacgccttccaggtggagagc cgggtcgcccgggctgggggacagctccgcacacagggagccctggtgctcgtggaatct ctggacttcgaggccataccagtatacaacttgacggtggcagcctcagaccggggcctg ccgcagcgcagcgccaccgtgcccgtgctcatcactgtgcaggacgtcaatgacaaccct cccgtgttcacccgggccgagtaccgtgcagcggtgagcgaggctgcgctgcctggcacc gagctgctgcgcgtggcggcccacgatgccgactcggggccacgtggccgcgttcactac accatcagctcgggtgaccagcacgggctattccagcttcatgagagcacgggggccctg agcctggtgcggccactggatcgggaggcccaggcgctgcacacactggtggtgcgggcc acggacgtgccgggtgggcactttgcgctggtccccgttgccattgaggtgaaggacatc aacgacaataagccatacttcccggtggaggtgctgagcgccagcatccgggagaacttg ccccccggcacgctggtcaccacgctgcgtgccgtcgatgccgacaccggcgccttcggg gagctgcggtacgtggtcctggagcagtcagtgggggaccccaccatgggggacggccgg gatgcctttgccgtcaatgggagctctggggagctgcgctcccgcctcacctttgactat gagcgagccaaagccttccagctcctggttcgggccaccgacgccggcaatgcctcggcc actgtgactgtgcgggtgctggtgacaggggaagacgagtatgatcccatcttcctgagc ccctccttcaacttcgaggtgcctgagggtgcgcgcaaagggcagaccattgggcgggtg ctggccacggatgaggatgagggggctgatggtgttgtcctgtacaccctggcaaagccc tcgccatactttgccatcaaccagacgacaggctccatctacctgcgtgtggacagccag ccccaagccggggctgggcgtgccaagagggagccacgggagatgagcctggaggtgcag gcacgtagccccctgcccgcttctcgtgtggcctctgcgcaggtcaccattgacgtcaca cacacatcctttggcctggcccctgacctcaacctactgctggtggctgtggccgcctcg ctgggcgttgtggtggtgctggccgccgtggccatcgtgctggccctggtgcgctcccgg cagcgccggggacacaagaaggcagagggggagggggcgctggcccgcgcacagagcggg tccttgcagaagctgggctgtgaggagccagcgctgcccggggctgaacacatctaccac caggcactgccagggtatgggacagagccggcggggccctacacgcggggcggctcgctg gacccctcacattccagcggccgtggctctgctgaagccgctgaggacgacgagatacgg atgatcaatgagtacccacgtgtggccagcatcacagcctccatgcaggagcacatcgct gcccgcggccctgactctggcatccagcaggatgccgaccagctctctgacatctcttgt gagccagctgcgttggagagcgcccagtggttcaagagcaagaagggctctgggctgctg ctgccggggccacccctgcagctgtaccgtgaggaggggggtggcagcgccttcctgggt gtccgctgcggcctcagcgtctcctcacagccccaggactacgccttcccagaggacggc aagccttccgtggagggctcgctcaccgccattgtggccagcgatgaggagctccgcggc agctacaactgggattacttgctgaactggtgtccccagttccagccgctggccagtgtc ttcacggagatcgcccgcctcaaggatgagagttccctgcgcaagcccttcccagccaag cccaaggcagagcccaagccccgcatcgaccccccgcccctcatcacctcggtggcccat ccaggtgccaagtctgtgccccccaagccaccgccaggcaggaccttcccgcacccatcc tccctgcgccgctcgcccatcagccacgagggttccatttcgtcctctgccatgtcgccc agcttctccccatcgctgtccccgctggctgcccgctcccctgtggtctcgcccttcggc atctcccaggggccatccgcctccaccatcagcgccgagcactcgctggagccccctgag gaggccgagctcaggatttag

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