Hirundo rustica (Barn swallow): 120749216
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Entry
120749216 CDS
T09369
Symbol
VPS36
Name
(RefSeq) vacuolar protein-sorting-associated protein 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120749216 (VPS36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120749216 (VPS36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hrt04147
]
120749216 (VPS36)
Membrane trafficking [BR:
hrt04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
120749216 (VPS36)
Exosome [BR:
hrt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120749216 (VPS36)
Exosomal proteins of colorectal cancer cells
120749216 (VPS36)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
GRAM
DUF1351
BBL5
Motif
Other DBs
NCBI-GeneID:
120749216
NCBI-ProteinID:
XP_039912353
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Position
2:complement(53321839..53340047)
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AA seq
386 aa
AA seq
DB search
MDRFSWTTGLLELGETLVVQQRGVRLSDGEEKVKFGTGVLLLSTHRLIWRDQKNHECCIA
VPLSQIVFIEEQAAGIGKSAKIVVHLHPASSSKEPGPFQSSKYSYIKLSFKEHGQIEFYR
RLSEEITQRRWETLPTGQAMQVNKDSQAGRIRAVGIVGIERKLEEKRKETDKNISEAFED
LSKLMEKAKEMVELSKSIANKIKEKQGDITEDETIRFKSYLLSMGIANPVTRETYGSGTQ
YHLQLAKQLAGILQTPLEERGGIMSLTEVYCLVNRARGLELLSPEDLVNACKMLESLNLP
LRLRIFDSGVMVIELQSHNEEEMVAAALETVSEKGSLTADEFAKLVGMSVLLAKERLLLA
EKMGHLCRDDSVEGLRFYPNLFLTQS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggacaggttctcgtggaccaccgggctgctggagctgggagagacgctggtggtccag
cagcgcggcgtgcgcctcagcgacggggaggagaaggtgaaattcggtactggagtttta
ctgctgagcacccacagactgatctggagggatcagaagaatcatgagtgctgcattgct
gtacctctgtctcagattgtatttattgaagagcaagcagctgggatagggaagagtgcc
aaaatagtagttcatctccatcccgcttcttcaagcaaagagcctggtccattccaaagc
agcaaatattcctacatcaagctttctttcaaggaacatgggcagattgagttctacaga
cgattatcagaagaaatcacacagaggagatgggagaccctgcccactggtcaggccatg
caagttaacaaggattcacaggcaggaagaataagagccgtaggaattgtaggtattgaa
aggaaattagaagaaaaaagaaaagagactgacaaaaacatttccgaggcttttgaggac
cttagcaaactaatggaaaaggctaaggaaatggtggaattatccaagtcaatagctaac
aagattaaagaaaaacagggtgacatcactgaggatgagaccattaggttcaagtcctat
ctactgagtatgggtatagctaacccagttacgagggaaacatacggatctggtacacag
taccacttgcaactggcaaagcaactggctggaatcctgcagacacccttagaggagcga
ggggggatcatgtctcttacagaagtgtactgcctggtgaatcgtgctcgagggctagag
ctgctgtcgccagaagatctagtaaatgcttgtaaaatgctggaatcactgaatttacca
ctaaggcttcggatatttgatagtggtgtgatggtgattgaactccagtctcataacgaa
gaggaaatggtagctgctgctttagagacagtatctgaaaagggttctctcacagctgat
gagtttgctaagctggtggggatgtctgttctcttagccaaagaaaggctgcttcttgct
gaaaagatgggccatctttgcagagatgattcggtggaaggcttaagattctacccaaat
ttatttctgacacaaagctaa
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