Hirundo rustica (Barn swallow): 120749382
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Entry
120749382 CDS
T09369
Symbol
CYFIP1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 isoform X2
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04810
Regulation of actin cytoskeleton
hrt05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
120749382 (CYFIP1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120749382 (CYFIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrt03019
]
120749382 (CYFIP1)
Messenger RNA biogenesis [BR:
hrt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120749382 (CYFIP1)
Factors involved in mRNA localization
Other mRNA localization factors
120749382 (CYFIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
LRIF1
zf-CW
Motif
Other DBs
NCBI-GeneID:
120749382
NCBI-ProteinID:
XP_039912665
LinkDB
All DBs
Position
2:85392831..85467578
Genome browser
AA seq
1253 aa
AA seq
DB search
MTAQVTLEDALSNVDLLEELPLPDQQPCIEPPPSSLLYQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNEMLEEGQEYAIMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRNAIERFCGEVRRLCHAERRKDFVSEAYLITLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMADPQSIQESQNLSMFLANHNKITQSLQQQLEVIVGYEELLAD
IVNLCVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGSVSNIYKLDAKKRINLAKIDKYFK
QLQVVPLFGDMQIELARYIKTSAHYEENKSRWTCASSSSSPQYNICEQMIQIREDHMRFI
SELARYSNSEVVTGSGRQEAQKTDAEYRKLFDLSLQGLQLLSQWSAHVMEVYSWKLVHPT
DKYSNKDCPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQDFAQVTLREPLRQAIKKKKNVIQSVLQAIRKTVCDWEAGHEPFNDPALRGEKDPK
SGFDIKVPRRAVGPSSTQLYMVRTMLESLIADKSGSKKTLRSSLEGPTILDIEKFHRESF
FYTHLINFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKAMAGS
LLLDKRLRSECKNQGATIQLLQSNRYETLLKQRHVQLLGRSIDLNRLITQRISAAMYRSM
ELAIGRFESEDLTSIVELDGLIEINKMTHKLLSRYMTLDSFDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKQPNAQPQYLYGSKALNLAYSS
IYSNYRNFVGPPHFKVICRLLGYQGIAVVMEELLKVVKSLLQGTILQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLIEQSLSLEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLESKYASLHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRIRSFLDDPIWQGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGTHEFTVEQCFGDGLHWAGCMIIVLLGQQRRFDVLDFCYHLLKVQKHDGKDEVIKNVP
LKKMVERIRKFQILNDEIIAILDKYLKSGDGESTPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgactgctcaagtaactctggaggatgccttgtccaatgtggatctcttggaggaatta
ccattgccagatcagcaaccgtgtattgagcccccaccgtcatctcttctttaccagcca
aacttcaacactaactttgaagacagaaatgcatttgtcactggtattgcaagatacatt
gagcaagctacagtccattctagcatgaatgaaatgttagaagaaggtcaggaatatgca
atcatgttatacacatggagaagctgctcaagagccattccccaggtcaagtgcaatgag
cagcctaacagagtagaaatctatgagaaaactgtggaagttctggagccagaagtcaca
aaactgatgaattttatgtattttcagagaaatgcaattgaacggttttgtggcgaggtg
agacgtttgtgccacgcggagagaaggaaggactttgtgtctgaagcctatctgatcaca
ctgggcaaattcatcaacatgtttgcggtgttggacgagttgaaaaacatgaagtgcagt
gtgaagaacgaccactcagcctacaagcgagctgctcagttcctgcggaaaatggcagat
cctcagtccattcaagaatctcagaacctttccatgttccttgccaaccacaacaagata
acacaatctttacagcagcagttggaggtgattgttggctatgaggagctgcttgcagat
attgtgaatttgtgtgtggactactatgaaaacaaaatgtatctaacacccagcgaaaaa
catatgcttttgaaagtgatgggctttggattatacctgatggatggaagtgtcagtaac
atctataagttggatgcaaagaaaaggataaatttagccaagatagacaaatacttcaag
cagttgcaggttgtcccactgtttggtgacatgcagattgaacttgcaagatacattaag
accagtgcccattatgaggaaaataaatccagatggacatgtgcatcttccagcagcagt
ccccagtacaatatatgtgagcagatgatccaaatcagagaagaccacatgcgtttcata
tctgaactggctcgttacagcaacagcgaggtggtgactgggtctggtcgacaggaagct
caaaaaacagacgcggaatatcggaagctctttgatctctctctccaaggcctgcagctt
ctctcccagtggagtgcccatgtcatggaagtgtactcatggaagctggttcacccaact
gacaaatattctaataaagattgtcctgacaacgcagaagagtatgaaagagcaaccaga
tacaattatactagtgaggagaagtttgctttggttgaggtgattgccatgatcaaaggt
cttcaggtgctgatgggacgaatggaaagtgttttcaatcatgccatccgtcatacaatt
tatgcagctcttcaggactttgcccaggttacgcttagggagccattaagacaagccatt
aaaaagaagaaaaatgtgattcaaagtgttttgcaggccataaggaagacagtgtgtgac
tgggaagcaggtcatgagccattcaatgacccagctctaaggggagagaaggaccccaaa
agtggctttgacatcaaagtcccaagacgtgcagttggaccctccagcactcagctttac
atggtgagaactatgttagagtccctcattgctgacaaaagtggttccaagaaaaccttg
agaagtagccttgaggggcccaccatattggacatagaaaaattccatcgcgagtctttc
ttctacactcatttgataaatttcagtgaaaccctacagcaatgctgtgatctgtcccag
ctgtggttcagggaattcttcttagagctgaccatgggcagaagaatccagtttcccatt
gagatgtccatgccttggattttgacagatcatattttggagacaaaagaggcatcaatg
atggagtatgttctgtattctttggacctttataatgacagtgctcattatgcacttacc
aaatttaagaagcagttcctctatgatgaaattgaggcagaggtaaacctgtgttttgac
caatttgtctacaagctggcagaccaaatatttgcctactacaaggcaatggctggcagc
ctgcttctggacaaacggctgcgttcagagtgcaagaaccagggagcaaccattcagctg
ctgcagtccaaccgctacgagacactgctgaagcagagacacgttcaactccttggcagg
tccatagacctgaaccgactgatcactcagcgcatttcggcagccatgtacaggtcgatg
gagctggccatcggccgctttgagagcgaggatctgacttccattgtggagctggatggc
ttgatagagataaacaaaatgactcacaagcttctgagtagatatatgaccttggacagc
tttgatgccatgttcagagaagccaaccacaacgtttcggccccttatggcagaatcact
cttcacgtcttttgggaactcaattatgatttccttccaaactactgctacaatggatct
actaacagatttgttcggaccgtgctgccattttctcaggagtttcagcgtgataagcag
cctaatgcacagccacagtatctctatggatcaaaggcattgaatttggcctattccagc
atttatagcaactacaggaatttcgttggcccccctcactttaaggtcatctgcagactt
cttggatatcagggcattgctgtggtgatggaggaattgctgaaagttgtcaagagtctg
ttacaagggaccattcttcagtatgtcaagaccctaatggaagtgatgcctaagatctgt
aggttaccaagacatgaatatggttctccaggtatcttggagttttttcaccatcagttg
aaggacattgttgaatatgcagaactgaagactgtctgcttccagaatttacgggaagtg
ggaaatgctgtcctgttttgcctcctcattgaacagagtctgtctctagaggaagtgtgt
gacctgttgcacgcagcgccgttccaaaacatcctgcccagggttcacgtcaaagagggt
gaaagacttgatgctaaaatgaagagactggaatcaaaatatgcttcactacatttggtt
cctctcattgaaagacttggcacaccccagcaaatagcaatcgcaagggaaggggacttg
ctgaccaaagaacgcctctgctgcggcctgtccatgtttgaggttatcctgacgaggatc
cgctccttcctggacgatcccatctggcagggacccctgcccagcaacggggtgatgcat
gtggatgagtgcgtggaattccatcggctctggagcgcgatgcaattcgtctactgcatc
cccgtgggaacacacgagttcactgtggagcagtgctttggggatggcttgcactgggct
ggctgtatgatcatcgtgcttttgggacagcagcggcgctttgatgtgttggacttctgc
taccacctgttgaaagtccaaaagcacgatggcaaagatgaggttatcaagaatgtgcct
ttgaagaaaatggttgagagaatccgcaagttccagattctgaatgatgaaataattgct
attttggacaagtatttgaagtccggcgatggagagagcacacccgtggaacacgtgcgc
tgcttccagccaccaattcatcagtcccttgccagcaactag
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integrated database retrieval system
