Hirundo rustica (Barn swallow): 120749403
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Entry
120749403 CDS
T09369
Symbol
GTF2E1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120749403 (GTF2E1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120749403 (GTF2E1)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
120749403 (GTF2E1)
Prokaryotic type
Archaeal type
TFE
120749403 (GTF2E1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Motif
Other DBs
NCBI-GeneID:
120749403
NCBI-ProteinID:
XP_039912704
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All DBs
Position
2:26695455..26744146
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AA seq
442 aa
AA seq
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MTDPDVLTEVPAALKRLAKYVVRGFYGIEHALALDILIRNACVKEEDMLELLKFDRKQLR
AVLNTLKGDKFIKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFKCPICFSTFTDLEANQLFDPRTGTFRCTFCETEVEEDESAMPKKDARTLVARF
NEQIEPIYALLRETEDVNLAYEILEPEPTEIPALKQSKERAAGAGSGAAAGLTGGHHQEA
WTTKGPSYEDLYTQNVVISMEDQEDLSRSASEGKPARERPIWLRESTVQGAYDPDEIKDG
GRDLDAFQEREEGRAALDDNEEVMRALLIHEKKTPSVSAVTVSGAAPLSGGNASDSESET
SESEEESPPRPAATATTTYGLEEEEEDEEFEVVAEDPTVTVAGRPHSYSQVSQRPELVAQ
MTPEEKEVYIAMGQRMFEDMFD
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacccagacgtcctcactgaggtcccagcagctctcaaacgccttgccaaatat
gtggtgcgtggcttttacggcatcgagcacgctctggctctggacatcctcatcaggaac
gcctgcgtgaaggaggaggacatgctggagctcctgaagtttgacaggaagcagctgagg
gccgtcctcaacaccctcaagggtgacaagttcatcaaatgcaggatgagggtcgagacg
gctcccgacggcaaaaccacgcgccacaactattacttcatcaactaccgcctgcttgtc
aacgtggtcaagtacaagctggaccacatgcgccgcaggatcgagacggacgagagagac
tccaccaaccgcgcctccttcaagtgccccatctgcttcagcaccttcacagatttggag
gccaaccagctgtttgacccccggacaggaactttccgctgtacgttctgcgagaccgaa
gtggaagaggatgagtcggcgatgcccaaaaaggacgcgaggacgctcgttgcgagattt
aacgagcagattgagcccatctacgcgctgcttcgggagacggaggacgttaacttagcc
tacgaaatcctggagccagaacccacagagattcccgccctgaagcagagcaaggagcgt
gcggctggtgctggttcgggggcagcagctggccttacaggcgggcaccatcaggaagca
tggactacaaaaggaccgtcgtacgaggacttgtatacccagaatgttgtcatcagcatg
gaggaccaggaggatctgagcaggtctgcaagtgaagggaagccagccagagagagaccc
atttggctgcgtgagagcacggtgcagggggcttatgaccctgacgaaatcaaagatggg
ggccgggatctggatgcgttccaggagcgtgaggagggccgggcagccctggatgacaac
gaggaggtgatgcgggccctgctcatccacgagaagaagacgccttccgtttccgccgtc
accgtcagcggtgccgctcctctctccggcggcaacgcgagcgactccgagagcgagacg
agcgagtcggaggaggagtcccctccccgccctgccgccacggccaccacgacgtatggg
ctggaggaggaggaggaggatgaagagttcgaggtggtggcagaagaccccactgtcaca
gtggctgggcgtccgcattcttacagccaagtgagccagcgccccgagctggtggcccag
atgacgccagaggaaaaagaggtttacatagccatggggcaacgcatgttcgaggacatg
tttgattaa
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