Hirundo rustica (Barn swallow): 120749442
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Entry
120749442 CDS
T09369
Symbol
RUNX1
Name
(RefSeq) runt-related transcription factor 1 isoform X1
KO
K08367
runt-related transcription factor 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120749442 (RUNX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120749442 (RUNX1)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Runt
120749442 (RUNX1)
BRITE hierarchy
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GFIT
Motif
Pfam:
Runt
RunxI
TagH_SH3-like
Motif
Other DBs
NCBI-GeneID:
120749442
NCBI-ProteinID:
XP_039912773
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All DBs
Position
2:117631476..117721459
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AA seq
459 aa
AA seq
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MRIPVDTSTSRRFTPPSTALSPGKMSEPLALPGAEHSGALPGKLRGADRSMVEVLADHPG
ELVRTDSPNFLCSVLPTHWRCNKTLPIAFKVVALGDVPDGTLVTVMAGNDENYSAELRNA
TAAMKNQVARFNDLRFVGRSGRGKSFTLTITVFTNPPQVATYHRAIKITVDGPREPRRHR
QKIDEQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTPNPRASLNHSTAFNPQPQSQI
QDTRQVQPSPPWSYEQSYQYLGSIATPAVHPATPISPGRAGGMTSLTAELSSRLSGASDL
TAFSDPRVGIDRSFPALPSISDPRMHYPGAFTYTPTPVSSGIGIGMSAMSTATRYHTYLP
PPYPGSSQAQAGPFQTSSPSYHLYYGTSAGSYQFSMISGGERSPPRIHPPCTNASTGSAL
LNPNLPGQSEVVEAEGSHSNSPTNMASTARLEEAVWRPY
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatccccgtagataccagcaccagccgccgcttcacgccgccctccaccgcgctg
agcccggggaagatgagcgagccgctggcgctgcccggcgccgagcacagcggggctttg
ccggggaagctgcgcggagccgaccgcagcatggtggaggtcctggcggatcaccccggg
gagctggtgcgcaccgacagccccaacttcctctgctccgtgctgcccacgcactggcgc
tgcaacaagacgctgcccatcgccttcaaggtggtggccctgggggacgtccccgacggg
accctggtgacggtgatggccgggaatgacgagaattactcggcggagctgcgcaacgcc
acggctgccatgaagaaccaggtggcgcggttcaacgacctgcgcttcgtgggcaggagc
ggcagagggaaaagcttcactctgaccatcacagtcttcacaaatcctccccaggtagcc
acgtaccacagagccatcaagatcacagtggatggacctcgggaaccccgaagacatcgt
cagaaaatagatgagcagacaaagcccggcagcttgtccttttctgagcgcctgagcgag
ctggagcagttgcgtcgcacggccatgagggtcagcccacaccacccagcccccacaccc
aaccctcgagcctccttgaaccacagcacagcttttaaccctcagcctcagagtcagatt
caggacacccggcaggtgcagccctcgccgccctggtcctacgagcagtcctaccagtac
ctgggctccatcgccacgcccgccgtgcaccccgccacgcccatctcacctggccgcgcc
ggcggcatgacctcgctgacggcagagctctccagccgcctctcaggagcgtccgacctg
acggcgttcagcgacccccgcgtgggaatcgaccgctccttcccggcgctgccgtccatc
tccgacccccgcatgcactacccgggcgccttcacctacacgcccacgcccgtcagctcc
ggcatcggcatcggcatgtcggccatgtccacggccacgcgctaccacacgtacctcccg
ccgccctaccccggctcctcccaggcccaggccggccctttccagaccagctccccatcc
taccacctctactacggcacctcggccggctcctaccagttctccatgatctccggcggg
gagcggtcgccgccgcgcatccacccgccctgcaccaacgcctccacgggctcggcgctg
ctcaaccccaacctgcccggccagagcgaggtggtggaggccgaagggagccacagcaac
tcgcccaccaacatggccagcacggccaggctggaggaggccgtctggaggccttactga
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