Hirundo rustica (Barn swallow): 120749469
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Entry
120749469 CDS
T09369
Symbol
POU2F1
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120749469 (POU2F1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120749469 (POU2F1)
03021 Transcription machinery [BR:
hrt03021
]
120749469 (POU2F1)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120749469 (POU2F1)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
120749469 (POU2F1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120749469
NCBI-ProteinID:
XP_039912830
LinkDB
All DBs
Position
2:complement(4578588..4681092)
Genome browser
AA seq
797 aa
AA seq
DB search
MADGGAASQDESSAAAVAAAADSRMNNPSETSKPSMESGDGNTGTQTNGLDFQKQPVPVG
GAISTAQAQAFLGHLHQVQLAGTSLQAAAQSLNVQSKSNEESGDSQQPSQPSQQPSVQAA
IPQTQLMLAGGQITGLTLTPAQQQLLLQQAQAQLLAAAVQHSASQQHSAAGATISASAAT
PMTQIPLSQPIQIAQDLQHLQQLQQQNLNLQQFVLVHPTTNLQPAQFIISQTPQGQQGLL
QAQNLLTQLPQQSQANLLQSQPSITLASQVFLEIQRREGVSSLKSSKRGLLTSLFLKIAV
PATPTRTIAATPIQPLPQSQSTPKRIDTPSLEEPSDLEELEQFAKTFKQRRIKLGFTQGD
VGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAENLSSDSTLSSPSAL
NSPGQGIEGLNRRRKKRTSIETNIRVALEKSFLENQKPTSDEIAMIADQLNMEKEVIRVW
FCNRRQKEKRINPPSSGGTSSSPIKAIFPCPTSLVATTPSLVTSSAATTLTVNPVLPLAS
PAVTSLSVTGTTETTSNNTATVISTAPPASSAVTSPSLSPSPSASASASEASSASETSTT
QTTSTPLSSPLGTSQVMVTASGLQTAAAAALQGAAQLPANASLAAMAAAAGLNPGLMASS
QFAAGGALLSLNPGTLGGALSPALMSNSTLATIQALASGGSLPITSLDATGNLVFANAGG
TPNIVTAPLFLNPQNLSLLTSNPVSLVSAAAASAGASGPVASLHATSTSAESIQNSLLTV
ASASGATSTTTTASKAQ
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcggcggcggcggtggcggcggcg
gcagactcaagaatgaacaatccgtcagaaaccagtaaaccatcgatggagagtggggac
gggaacacaggcacgcaaacgaatggcctggactttcaaaagcagcctgtgcctgtcgga
ggagcaatctctacagcccaggcccaggccttccttgggcaccttcatcaggtccagctc
gctggaacaagtttacaggctgctgctcagtccttaaatgtacagtctaaatctaatgaa
gaatctggggactctcagcagccaagccagccttcccagcagccttcagtgcaggcggcc
ataccccagacccagctcatgctggccggaggacagatcaccgggctcacgttgacgcca
gcccagcaacagttattgctccaacaggcgcaggcccagttgctggcggctgccgtgcag
cactcggccagtcagcagcacagcgctgctggtgccaccatctcggcctctgctgcgacg
ccgatgacgcagatccctctatctcagccaatacagattgcacaggatttgcagcacttg
cagcagcttcagcagcagaatctcaacctgcaacagtttgtgttggtgcatccaacaacc
aacttgcagccagcacagttcatcatctcacaaacgccgcaggggcagcagggtctcctg
caagcgcagaatctcttaacgcaactacctcagcaaagccaagccaacctcctgcagtct
cagccaagcatcacccttgcctcgcaggttttcttggaaattcagaggcgtgaaggtgtg
agctccctcaaaagctccaaaaggggattactgacaagtctctttctgaagattgcagtg
ccagcaaccccaacacgcacaatagcagcgacccccattcagccacttccacagagccag
tcaacaccaaagcgaatcgacactcccagcttggaggagcccagtgaccttgaggagctt
gagcagtttgccaagactttcaaacaaagacggatcaaacttggattcactcagggtgat
gttgggctcgctatgggcaaactctatggaaatgacttcagccaaactaccatctctcgc
tttgaagccttgaacctcagctttaagaacatgtgcaagttaaagccacttctggaaaag
tggctcaatgatgcagaaaacctctcatctgattcaactctctccagcccaagtgccctg
aattctccagggcaagggatcgaaggcttgaaccgtaggaggaagaaacgcaccagcata
gagaccaacatacgtgtggccttagagaagagtttcctggagaaccaaaagcctacctcg
gatgagatcgccatgatagctgaccagctaaacatggagaaggaggtgatccgcgtttgg
ttctgtaaccggcgccagaaggagaaaaggatcaacccacccagcagtggtggaaccagc
agctcgcccatcaaagcaattttcccttgtccaacctcactggtggcaaccacgccaagc
cttgtgactagcagtgcagctacaaccctgactgtcaaccccgtcctccctctggccagt
cctgctgtcaccagtctgtcagtcacaggcacaacagaaaccacctccaacaacacggcg
acagtgatttcaacagcacctccagcttcttcagcagtgacatcaccctccctgagtcct
tccccttctgcctcagcctccgcttcagaggcatccagtgccagtgagaccagcacaaca
cagacaacctccacccccttgtcctcccctctcgggaccagccaggtgatggtaacggca
tcagggttgcaaacggcggcagcggccgccttacaaggagctgcacagttgcctgcaaat
gcaagtcttgctgccatggctgctgcagcaggactaaacccaggcttgatggcatcctcg
cagtttgcagctggaggtgccttactcagtctcaatccagggacattaggtggtgctctc
agcccggccctgatgagcaacagtacactggcaactattcaagctcttgcatccggtggc
tctcttccaataacatcactggatgcaactggaaacttggtgtttgccaatgctggaggt
acccctaacatcgtcactgcccctctgttcctgaaccctcagaacctttctctgctcacc
agcaacccagttagcttggtctctgcagctgcagcctccgcaggggcctctggaccagtc
gccagccttcacgccacctccacctcagccgagtccatccagaactctctcctcacggtg
gcctctgccagcggggccacgtccaccaccactactgcctccaaggcacagtga
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