Hirundo rustica (Barn swallow): 120749499
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Entry
120749499 CDS
T09369
Symbol
CHAF1B
Name
(RefSeq) chromatin assembly factor 1 subunit B isoform X1
KO
K10751
chromatin assembly factor 1 subunit B
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrt03036
]
120749499 (CHAF1B)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
120749499 (CHAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
CAF-1_p60_C
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WDR55
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
B-prop_COPA_B_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_SPT8
eIF2A
Beta-prop_EML
Beta-prop_ELP1_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_Nup120_160
Ge1_WD40
Beta-prop_IP5PC_F
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
120749499
NCBI-ProteinID:
XP_039912886
LinkDB
All DBs
Position
2:complement(117097628..117111119)
Genome browser
AA seq
645 aa
AA seq
DB search
MLSPNKNFSRNMKVITCEIVWHNKEPVYSLDFQHGADGRINRLASAGVDTAVRIWKVEKG
PDGKAIVEFLSNLARHTKAVNVVRFSPSGEILASGGDDAVILLWKLNDSKELEPLVFQDE
DEAQLNKENWAVVKTLRGHLEDVYDICWTSDGNFMASASVDNTAIMWDVSKGQKVSIFNE
HKSYVQGVTWDPLGQYIATLSCDRVLRVYSTQTKRVAFNVTKMPSGSGAEGEARSFRMFH
DDSMKSFFRRLSFTPDGSYLLTPAGCVESGENVTNTTYVFSRNNLKRPVGHLPCPGKGTL
AVRCCPVYFELRGASAKDEISPKSPPGLFNLPYRLVFAVASEDSVLFYDTEQSFPFGYVS
NIHYHTLSDISWSSDGSFLAISSTDGYCSFVTFEEDELGVPLKEKPQIPVRTPGAAADKK
AKKSQSHKAISPSSRLAEGTPPSKDPPVQPRTPGTAGKELPSTPAAVRTAPGSSPSTPAA
VRTAPGSSPSTPAAVRTAPGSSPSTPAAVRTAPGSSPSTPAAVKTAPGSSPSTPAAVRTA
PGSSPEERRSSQSSRAPQPRRVTLTTLQSCFKTPRRINLISLKPDTLSSAFPDPAPIPPS
SEQEHERPLSSDESLQAPPAPKRARTEELSLPAPAGDQTSCESNK
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccccgaacaagaactttagccgaaacatgaaggtgatcacgtgtgaaatagtg
tggcataacaaggagccggtttacagcttggacttccagcatggagcggacgggaggatc
aatcgcctggcctcggcaggggtggacacggccgtgaggatctggaaggtggagaaaggc
ccggatggaaaagccatcgtggaattcctgtccaacctggcgcgccacaccaaggccgtg
aacgtcgtgcgcttctcccccagcggggagatcctggcctcaggaggggatgatgctgtc
attttgctgtggaagctgaatgacagcaaagagttggagccgttggtttttcaggatgaa
gatgaagctcagctcaacaaggagaactgggcagtcgttaaaactttgagaggccacttg
gaagatgtgtatgatatttgttggacctcagatggaaatttcatggcttctgcttctgtg
gataacacagcaatcatgtgggatgtcagtaaaggacagaaagtttcaatatttaatgag
cacaagagttatgtccaaggagtaacctgggatcctctaggccagtatattgcaaccctg
agctgtgacagggtcctgcgagtttacagcacccagaccaagcgagtggccttcaacgtc
accaagatgccatcggggtcaggagctgaaggagaggcgaggagctttcggatgtttcac
gacgacagcatgaagtcgtttttccgcaggctcagcttcactcctgatggctcctatctg
ctcactccagctggctgcgtggaatcgggagagaacgttacaaacaccacctatgttttc
tccagaaacaatctcaaaaggcccgtgggtcacctgccctgtcctggcaagggaactctg
gctgttcgctgctgtcctgtgtactttgagctgagaggagcctctgctaaagatgaaatc
agtcccaaatccccccctggcctgtttaacctcccctatcgactggtgtttgctgttgct
tcagaagattccgtgcttttttatgacactgagcagtccttcccctttggttatgtctcc
aacatccattaccacaccctgagtgacatttcgtggtccagtgatggatccttcctggcc
atttcttccacggacgggtactgctccttcgtcaccttcgaggaggatgagctgggagtg
cccctgaaggaaaagccccagatccctgtcaggactcctggtgcagcagcagacaagaaa
gccaagaagagccagtcccacaaagcgatttccccaagctccaggctggcagaggggacc
cctcccagcaaggatcccccagtgcaaccccgaacccccggcaccgctgggaaggagctg
ccttccacccctgctgccgtcagaaccgctccaggctcatccccttccacccctgctgcc
gtcagaaccgctccaggctcatccccttccacccctgctgccgtcagaaccgctccaggc
tcatccccttccacccctgctgccgtcagaaccgctccaggctcatccccttccactcct
gctgccgtcaaaactgctccaggctcatccccttccacccctgctgcagtcagaaccgct
ccaggctcatccccagaggagaggagaagcagccagagcagcagagccccccagcccagg
agggtcaccctcaccacgctgcagtcgtgtttcaaaacacccaggagaataaacttgatt
tccttgaagccagataccctatcctctgcatttccagacccagctcccatccctccttcc
tcagagcaggaacatgagaggccgttgtcatctgatgagagcctccaagctcccccagca
ccaaaacgtgccaggactgaggaattgtcccttcctgcacctgctggagaccaaaccagc
tgtgagtccaacaagtaa
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