Hirundo rustica (Barn swallow): 120749604
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Entry
120749604 CDS
T09369
Symbol
PTCHD1
Name
(RefSeq) patched domain-containing protein 1
KO
K24682
patched domain-containing protein
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
120749604 (PTCHD1)
Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
Other domain-containing proteins
Patched domain-containing proteins
120749604 (PTCHD1)
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Gene cluster
GFIT
Motif
Pfam:
Patched
Sterol-sensing
NPC1_MLD
Motif
Other DBs
NCBI-GeneID:
120749604
NCBI-ProteinID:
XP_039913103
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All DBs
Position
2:105434425..105471431
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AA seq
888 aa
AA seq
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MLRQVLHRGLGTSFSRLGHFVASHPVFFASAPVLISILLGASFSRYQVEESVEHLLAPTH
SLAKIERNLVDSLFPVNRSKHRLYSDLQTPGRYGRVIITSFRKANMLDQHHTDLILKLHS
AVTRIQVQRPGFNYTFAHICILNNDKTCIVDDIVHVLEELKAARSSNRTNFAITYPITHL
KDGREVYNGHQLGGVTVHSKDRVKSAEAIQLTYYLQAINSLNDMVAEKWESIFCDTVELF
QKSNRKVKMYPFTSSSLKEDFQKTSRVSERYLITSLVLVVTLAILCCSMQDCVRSKPWLG
LLGLLTVTLATLTAAGIINLTGGKYNSTFLGIPFVMLGHGLYGTFEMLSSWRKTREDQHV
KERTAAVFADSMLSFSLTTAMYLVTFGIGASPFTNIEAARIFCCNSCIAIFFNYLYVLSF
YGSSLVFTGYIENNYQHSIFCRKVPKPEVLQEKPAWYRFLLTARFSEDTDDSEETNTYES
HLLVWFLKRYYCDWITNTYVKPFVVLFYLVYISFALMGYLQVSEGSDLSNIVATATRTIE
YTTAQQKYFSNYSPVIGFYIYESIEYWNTSVQEDVLEYTKGFVRISWFESYLNYLRKLNI
STGLPKKNFTDMLRNSFLKTPQFAHFSEDIIFSKKYNNEVDVVASRMFLVAKTMETKREE
LYDLLETLRKLSLTSKVKFIVFNPSFVYMDRYASSVGAPLQNSCISALFLLFFSAFLVAD
SLINVWLTLTVASVEFGVIGFMTLWKVELDCISVLCLIYGINYTIDNCAPLLSTFVLGKE
FTRTKWVKNALEVHGVAILQSYLCYIVGLIPLAAVPSNLTRTLFRCLFLIALVTFFHCFA
ILPVILTFLPPSKKKRKEKKNPENREEIECVEMVDMDSTRVVDQITTV
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgttgcggcaggtcttgcacagggggctggggacgtccttctcccggctcggccacttc
gtcgccagccacccggtgttcttcgcctcggcgcccgtgctcatctccatcctgctgggc
gccagcttcagccgctaccaggtcgaggagagcgtggagcacctcctggcccccacgcac
agcctggccaagatcgagaggaacctggtggacagcctcttcccggtgaaccgctccaag
caccggctctactccgacctgcagacgcccgggaggtacggccgggtgatcatcacctcc
ttccgcaaggccaacatgctggaccagcaccacaccgatctcatcctcaagttgcactct
gcagtgaccaggatccaagttcaaagacctggtttcaattacacgtttgcccatatatgt
atcctgaacaatgacaagacatgcatagtggacgacatagtgcatgtactggaggaatta
aaggctgctcgttcttctaatcgaactaattttgcaatcacttatccgattactcactta
aaggatggcagggaagtgtataacgggcatcagctcggtggggttactgtgcacagcaag
gaccgggtgaagtctgcggaagccattcagctcacctactacttgcaggcaatcaactcc
ttgaatgacatggtggcagagaagtgggaatccattttttgtgacactgttgaacttttc
cagaaatccaacaggaaagtcaaaatgtatcctttcacttcctcttcgctgaaggaggat
ttccagaagacgagcagggtgtcagaacgctacctgatcacaagcttggtccttgtggtc
accttggccattctctgctgctccatgcaggattgtgtccgcagcaagccctggcttggc
ctgctgggattgctgacagtgacccttgccaccctgactgctgccgggatcatcaatctc
actggtgggaaatacaattccaccttcctgggaatccccttcgtcatgttaggtcatggg
ttgtatgggacttttgaaatgttgtcctcctggagaaaaactagagaagaccaacacgtt
aaagagaggactgcagctgtatttgcagactccatgctctcgttttctctcaccactgcc
atgtacctggtcacttttggaataggtgccagtcccttcactaacattgaagcagccagg
attttctgctgcaattcctgtattgcaattttcttcaactacctctatgtactctccttt
tatggttccagcctggtgtttactggctacatagaaaacaactaccagcatagtatcttc
tgcagaaaggtaccaaagccagaggtattgcaagagaagcctgcatggtataggtttctt
ctaacagccagattcagtgaggacacggatgattcagaggaaacgaacacttacgagagt
catcttttggtgtggttcctgaaacgctattattgtgactggataacaaacacttacgtc
aagccttttgtagttctcttttaccttgtttatatttcatttgccttaatgggctacctg
caggtcagtgaggggtcagacctgagcaacatcgtagcgactgcgactcggaccatcgag
tacacgactgcccagcagaagtatttcagtaactacagcccagtcattgggttctacatc
tacgagtcaatcgagtactggaacaccagtgtccaggaggacgtgttggagtataccaag
ggttttgtgaggatatcttggttcgaaagctacttaaattaccttaggaaactcaacata
tccactggattgccgaagaagaatttcactgacatgttgaggaactccttcctgaagacc
cctcagtttgcccatttttcagaggatatcatcttttccaagaaatacaacaatgaagtt
gatgttgtggcctccaggatgttcttggtggccaagacaatggaaaccaagagagaagaa
ctttatgacctcctggagaccctgaggaagctctcgctcacctccaaggtgaaattcatc
gttttcaatccatcatttgtgtacatggatcgttatgcctcttcagtgggagccccctta
caaaactcctgcattagtgctttatttctgctcttcttctctgcattcctggtggcagac
tctctgatcaatgtctggctcactctaactgttgcctcggttgaatttggagttataggt
tttatgaccttgtggaaagtggaactagattgtatttctgtgctgtgcttaatttacgga
attaattatacaattgacaactgtgctccactgttatcaacctttgtcctgggcaaagag
ttcacaagaactaaatgggtgaaaaatgccctggaagtgcatggggtagctattttgcag
agctacctctgctatattgttggtctgattcctcttgcagctgtgccttcaaatctgacc
cgtacactgttcaggtgcttgtttttaatagcattagtcaccttctttcactgctttgcc
attttacctgtgatactgactttcctgccaccctccaagaagaagaggaaagagaagaag
aatcctgaaaaccgtgaggaaatagagtgtgttgaaatggtggatatggatagcacccga
gtggttgaccaaattacaacagtctaa
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