Hirundo rustica (Barn swallow): 120749615
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Entry
120749615 CDS
T09369
Symbol
LAMA1
Name
(RefSeq) laminin subunit alpha-1 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04510
Focal adhesion
hrt04512
ECM-receptor interaction
hrt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120749615 (LAMA1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120749615 (LAMA1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120749615 (LAMA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
3keto-disac_hyd
Hepar_II_III
Motif
Other DBs
NCBI-GeneID:
120749615
NCBI-ProteinID:
XP_039913117
LinkDB
All DBs
Position
1:complement(51225122..51324851)
Genome browser
AA seq
3097 aa
AA seq
DB search
MGSGGWRLLALLAATSLLWVPGQGQPRGLFPAILNLASNAHISTNATCGEKGPEMFCKLV
EHVPGRPLRNAQCRVCDRHSTNPKEQHPISSAIDGTNNWWQSPSIQNGRQYHWVTITLDL
RQVFQVAYVIIKAANAPRPGNWILERSIDGTEFRPWQYYAISDTECLTRYNITPRIGPPT
YKRDDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDPSQKLLEFTSARYIRLRLQRIRT
LNADLMTLSHNDPKELDPIVTRRYYYSIKDISVGGMCICYGHARSCPLDEITKKLQCQCE
HNTCGESCNKCCPGYHQKPWRPGTLSAGNKCEKCNCHNKAEDCYYNQSIADQKRSMDIHG
QYIGGGVCLNCTQHTTGINCEMCADGYFRPHKVSPYEDHPCYPCDCDPFGSLSSVCVKDE
HHSDSQHGTWPGQCQCREGYGGEKCDRCAFGYQGYPNCLRCNCSLVGSINEDPCMEPCLC
KENVEGENCDLCKPGFYNLQERNPQGCTECFCFGVSDVCDSLTWPISQISDMTGWLVTDL
YKARNVQPQRSQFDGPHQISINNTEAVKVLKNTYYWSAPEAYLGNKLTAFSGDLKYSVSY
DIPMESVDSDIVSSVDVIIQGNGKILSTRAAGLSLQPYEEYSNSVRFVPENFIEFNTKKA
IDREMLMTVLANVTHLLIRANYNIAKKAVYRLDSVTLDNANANVIDLSSAPDVEFCECPQ
GYTGISCESCLPGYYRVDGILFGGICQPCKCNGHATECDIHGVCFACQHNTTGPFCDQCL
PGFYGNPSRGTSEDCQPCACPLSSAANNFSPTCQLSEEGGIVCDKCLPGYTGSQCERCTN
GYYGNPLMPGQLCAPCECNGNVNPQEEGHCDPFTGQCLKCLGNTAGHHCEKCADGYYGDA
VIDKNCRACACHVNGSLSSTCQHETGVCSCKSNVIGERCDKCLNGYYGLLTGLGCVPCNC
SQFGSVSEDCDHQGQCHCVPGVAGEKCDRCAHGFYAFQDGGCTPCDCAHTQNNCNADSGQ
CICPPHTQGQKCELCEENYWGLSPKLGCKACNCSNTGSADLQCDVLTGQCQCKIEFGGRD
CSRCALGYRDYPDCVACDCDLSGTRAETCNDTEGVCGCEEESGVCTCKENVFGLQCSECK
PGTFGLSANNVLGCTPCFCFGMSTSCSELEDHVRIPITLTPDQAILRVVAQSNLTGTVEG
VFSQFPDVLLDAAIVRKYLNTETFYWKLPEQFQGDQLMAYGGKLRYIVAFYALDGFGTSN
FEPQILMKGGHSSKLVIYVDIPSPENAVRTDMEVEMKEDSWKYFNSVSDKPVLRSDFMSV
LSNVEYILIRAAYGQGLQQSRIANISMEIAVKFEEMHLGRPLAHLIEQCRCPAGYTGLSC
QSCAPGYYRGKHTDLSVREPHALIAPCVPCQCNNHSETCDPDTGKCLNCRDNTVGDYCSA
CAPGYYGKVTGSANDCSLCACPRGNPVSFSPTCVLKGAQDYHCDACLPGYEGQYCERCSP
GYYGDPELPGGSCRLCQCNPGGSVHGNCDPATGQCLCKPGVTGQLCEECEPRHLLVEDEC
VSCDDNCTGVLLNSLDNLNEAVLSVNLTGIDRLPYGILSELENATQHLRRSIVPKEDPAY
SLDTAKENLLNLSGGIDHLHEETTRFLKKAQQLDTMTQKTRKKSQELTGFIDTVHTTIKV
LAEVAFSLNETLGLDLPLSNATSQSLQDDISALLDALRKKDFFQQHHNATTALRAAEKLL
TQVQKEYLKPQQELAELKAHASQFLSKQSSSLQDAQHLVNEALTNINETHRLFPLISSNL
AELNDKKLKIKEGEEVSTTLIKEGKVLLNAAAALALDVKNSTFNVEVHQDGLVLWSTKLR
HHVDELVMQMSVRGVLDLVYRAEEHATQFQRLADALESDLSRVRSVTLNATAAIYTHSSV
KSVIERTESLADDASRVVNGPLDLPEESFSLLGKETLLLSSKFENDAKNLRKKSDGLLFG
LNGLKKKVEKIQESTNKIGNQLNDSLLTLRALPNNTGKSMLEVKELAVSANTSAVVDLSH
FGEFRQKLMNTSSTLSQVNDTLRKTSELITDSSKAAFTAEKQIKEVEAQASLLLDRLKPL
KMLEENLNRNLSEIKELISQARKQAASIKVAVSADRDCIRAYQPQISSTNYNTLTLNVKT
AEPDNLLFYLGSNGKTDFLALEMRRGKVALLWDLGSGSTRVEYPDFQIDNNKWHRIHATR
FGKTGTLSIEEMNSNQKPSPKSGTSPGTASILDVNKSTLMFIGGLGGQIKKSPAVKVTYF
KGCLGEASLNGKSVGLWNYVEREGKCNGCFGSPQDEDTSFHFDGSGYSVVEKALRSTVTQ
IIIFFSTFSPNGLLLYLASNGTRDFLSLELVDGKVRVTVDLGSGPLALTTENHYNNGTWY
KISFNRNKKQGVLAVMDAYNLNYKETKQGESPGVASDLNRSDKDPIFIGGLPRSRALRKG
LNSRMYVGCIKNLEISRSTFDLLRNSYGVRKGCVLEPIHSVSIMNNGYIELVPKSLSPES
ELMATFATKNSSGIILAGLSRGLEKRQRRQAHLPFFSIMLIDGHLAVHVNAGDRASTRKV
VLQSANGTYSDGQEHSVILIRNKRIITVQVDESKPAELRLGSAAENSPINISNFYAGGIP
AGEGILGLKLASSFHGCISNLIFNKELLYFTTSMKYEHVDMDSCFLSEKPNPAVQPIDIV
IQPEFQALPVPLRPLTDTKKVVCAKDELPDHVQGAHQFGLAKGSHLTLLFNQSAVRKKLS
VQLNLRTFASSGLIYYMAHQNQVDYAALQLYRGQLHFSFDLGKGKAVALHPAVVSDGKWH
TVKTEYVKRKGTIIVDGQELVTVNVLGDGSTLDVEGKLYVGGLPLDYVPKNLGNVTHSIP
ACIGSMTINSKQLDNESPVSIFAVNKCYETVQDGTFFDGSGFAALVREGYKVRSDVNITL
EFRTTAVHGVLLGVSSAKVDAIGLEIVHGKVLFHVNNGAGRITATYEPRGTNSLCDGKWH
KLQANKSKHHISLIIDGNLVHAENPYIQSTSADTNNPIYVGGYPADVKQNCLTSKSSFRG
CLRNLVLTKGQHTELFDFSRAFDLRGVFPHSCPGAEH
NT seq
9294 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcggcgggtggcggctgctggcgctgctggccgcgacttcgctgctgtgggtg
ccggggcagggccagccccgaggcctgtttcctgccattttgaacctggccagcaatgct
cacatctccaccaatgccacctgtggggagaagggaccggagatgttctgcaaactggtg
gagcacgtccctggacggcccctgcgcaatgcccagtgccgcgtctgtgaccgtcacagc
accaatcccaaagagcagcacccaatttccagtgcaatcgatggtaccaataactggtgg
cagagtcccagcattcagaatggaaggcaataccactgggtcaccatcactttggattta
aggcaggtctttcaagttgcatatgtcatcatcaaagctgctaatgctccacgacctgga
aactggattttggaacgctccatagatggcacagagttcagaccatggcagtactatgca
attagcgatactgaatgtttaactcgttacaatattacaccaagaattgggccgccaact
tacaagagagatgatgaagtgatctgcacctcctattattccagactagttcccctggaa
catggagagattcatacgtcgctgatcaatggtaggcctagcgctgatgatccttcacag
aagctgttggaatttacttctgcacgatacattcgcctgcgactgcagcgcattagaact
ctgaatgctgacctcatgactctcagccacaatgatcctaaggagctagaccccattgtt
accagaaggtactactattcaataaaggacatctctgttggtggcatgtgcatttgttat
ggccatgctcgaagctgccctttggatgaaatcacaaagaaattgcagtgccaatgtgaa
cataacacatgtggagagagctgtaacaagtgctgtccaggctaccaccagaaaccatgg
agaccaggaaccctttctgctgggaacaaatgtgagaaatgtaattgtcataacaaagca
gaagattgctattacaatcagagtattgcagatcagaaaaggagcatggatattcatggc
cagtatataggaggtggtgtgtgtttaaactgtactcaacatactactgggatcaactgt
gaaatgtgtgctgatggatattttagaccacacaaagtttctccctatgaggatcacccc
tgctatccctgtgactgcgacccgtttggctctctgagttctgtctgtgttaaagatgag
caccattctgactctcagcacgggacttggccaggccagtgtcagtgcagggaaggttat
gggggagaaaaatgtgatcgttgtgcatttggatatcagggctacccaaactgcctgcgt
tgtaactgcagcctggttggtagcattaatgaagatccatgcatggaaccttgtctttgc
aaagaaaatgtagaaggtgaaaactgtgatctctgtaaaccaggattctacaatttgcaa
gaaagaaatcctcagggctgcacggagtgtttttgctttggcgtttctgatgtctgtgac
agtcttacgtggcccatcagtcagatttcagacatgactggatggctcgtgactgatctg
tataaagcaaggaatgtgcagcctcagcgaagccaatttgatggaccccatcaaataagt
attaacaacactgaggctgtgaaagtactgaaaaatacttattactggtcagcacctgag
gcatatctaggaaataaactcacagcttttagcggagacttgaagtactctgtatcttat
gacattccaatggagagtgtggacagtgatatagtgtctagtgtggatgtcatcattcag
ggtaatgggaagattctgagtacaagagcagcaggcttgtcattacagccatatgaggag
tattctaattcagtgagatttgtaccagagaatttcatagagttcaatacaaaaaaggca
atagaccgggaaatgttgatgactgttctggcaaatgtgacccatcttctgatcagggcc
aactacaacatcgccaaaaaggctgtgtacaggctggactctgtgaccctggataatgca
aatgcaaatgttatagatctttcttcagcaccagatgtggaattctgtgaatgtcctcag
ggttacacaggaatatcctgtgagtcctgtctccctgggtactaccgtgtggatggaata
ctcttcgggggcatttgtcaaccttgcaagtgcaatgggcacgcaactgagtgtgacatt
cacggtgtttgttttgcttgtcaacacaacacgacaggacctttctgtgatcagtgcttg
cctggcttctatggaaatccgtcccgaggaacatctgaggactgccagccctgtgcgtgt
cctctgagttctgctgcaaacaatttcagtcccacttgtcagctgagtgaagaaggtgga
attgtctgtgacaaatgtcttccaggctatactggttctcaatgtgaaaggtgtactaat
ggttactatgggaatcctcttatgcctggacagttgtgtgctccttgtgaatgcaatggc
aatgtaaaccctcaagaggagggccactgtgatcccttcacaggacagtgcctgaaatgt
ctggggaacacagcaggtcaccactgtgaaaagtgtgctgatgggtattatggggatgca
gtgattgacaaaaactgtcgtgcctgtgcctgccacgtgaatggttccctttcaagtact
tgtcaacatgagacaggtgtttgttcctgcaaatcaaatgtaattggagaaagatgtgat
aaatgcttgaacgggtattatgggctgcttactgggcttggctgcgttccctgcaactgc
agtcagtttggctcagtgtccgaggactgcgatcatcaggggcagtgtcactgtgtgcca
ggagtggctggagagaagtgtgatcgttgtgctcatggcttttatgcattccaggacggt
ggctgcacaccctgtgactgtgcccatactcagaacaactgcaatgctgattctggccaa
tgtatttgtccccctcacactcagggacaaaagtgtgaactctgtgaagaaaattactgg
ggactctctcctaaacttggttgcaaggcttgcaactgtagcaacactggttcagccgat
ctccagtgcgatgtgttgacaggtcaatgccagtgcaaaattgaatttggaggacgagac
tgttccaggtgtgccttaggctacagggactacccagactgtgttgcctgtgactgtgat
ttgagtggaaccagagcggagacatgtaatgacactgaaggagtttgtggttgtgaagaa
gaaagtggcgtctgtacctgcaaggaaaatgtttttggtctacaatgcagtgagtgtaaa
cctggaacttttggtctgtctgctaacaatgttctaggatgtactccatgcttctgtttt
gggatgtccacatcttgttcagagctagaagaccatgtgagaattcctataaccttaact
ccagatcaggctattctgcgtgtagtagctcaaagtaacctgactggaacagtggaagga
gtattttcacaatttcctgatgttttattggatgctgccatagtcagaaaatacttaaac
acagaaacattttactggaagttgccagagcagtttcagggagaccagctcatggcctat
ggagggaagctgagatatattgttgccttttatgctttggatggctttggaacctcaaat
tttgagccacagattctaatgaaaggaggtcacagcagcaagttggtcatctatgtagac
atcccttctccagaaaatgcagtaagaactgacatggaagtagaaatgaaggaggattct
tggaagtattttaactctgtgtctgataagcctgtcttacgttctgacttcatgtctgtg
ctcagcaatgttgaatacatccttatcagggcagcttatggccaaggattacagcaaagc
agaattgcaaatatctcaatggaaattgcggtcaagtttgaagaaatgcatctaggcaga
cctctagctcatcttatagagcaatgtaggtgtcctgctggttacactggattgtcctgc
cagagctgtgctccaggatactacaggggaaagcatacagatctcagtgtaagagaacct
cacgctctgatagcaccttgtgtgccatgtcagtgcaacaaccacagtgaaacctgtgat
cctgacactggaaagtgcttgaactgcagagataacacagttggtgattactgcagcgct
tgtgccccaggctactacgggaaagtaacaggatctgccaatgactgctccctttgtgct
tgtcccagaggcaaccctgtcagttttagtcccacttgtgtcctgaaaggtgctcaggat
taccactgtgatgcttgtctcccaggatatgaaggacagtactgtgaaaggtgctcccct
ggctattacggtgaccctgagctccctgggggcagctgccgtctgtgccagtgcaatccg
ggcggttctgttcacgggaattgcgaccctgccactgggcagtgcctctgtaagccgggg
gtaacgggacagctctgtgaggagtgtgagccgaggcatctcctggtggaagacgagtgt
gtgtcttgtgatgacaactgcacaggagttctgttaaacagtttggataatctcaacgag
gccgtgctttcagtgaacctcactggtattgaccgtctgccctatgggatattgtcagag
ttggagaatgcaacacaacatctgaggaggtccatagttcctaaagaagatccagcttac
tcattagatacagcaaaagaaaatcttctgaatttatcaggaggaattgatcacttgcat
gaagagacaactagatttttgaaaaaagctcagcaacttgacacaatgactcagaaaacc
aggaagaaaagtcaagaactgactggctttattgatacagtacatacaaccatcaaagta
ctcgctgaagttgctttctcactaaatgaaacactgggcctggatctgccactgtcaaat
gctacatctcagagcctgcaggatgatatttctgcccttttggatgcattgcgcaagaag
gatttttttcaacagcaccataatgctaccacggccctaagagctgcagaaaagttgttg
acccaggttcagaaagagtatctcaaaccccagcaggagcttgctgaactaaaagcgcat
gcaagtcagttcttatcgaagcagagcagcagcctgcaggatgcccagcacctggtgaac
gaggcgctcactaacatcaatgagacccatcgcttgtttcctctcatctccagcaacctg
gcagagttaaatgacaaaaagctaaaaataaaggaaggtgaagaagtctcaaccacactc
attaaagaagggaaggtcctactgaatgctgctgctgctcttgccctagatgtaaagaac
tctacatttaacgtggaagttcaccaggatgggttggtcctgtggagcaccaaactgcga
caccacgtggacgagctggtgatgcagatgtctgtgagaggagtgcttgacttggtatac
cgagctgaggaacatgccacccagttccaaagacttgcagatgcactagagagtgacctt
tctagagtaagaagcgtgactctgaatgcaactgctgcgatctacactcactccagcgtt
aaaagtgtgatcgaaagaacagagagtttggcagatgatgcatctagagttgtgaatggc
cccttggatttaccagaggagtctttcagtcttctgggaaaagaaactctactgcttagc
tccaaatttgagaatgatgctaaaaatctcaggaaaaaaagtgatggacttctatttgga
ttgaatgggttgaagaaaaaggtagaaaagattcaggaaagtactaataaaattggcaac
caacttaatgattctctgttgacactcagagcattgcctaacaataccgggaaatccatg
cttgaagtgaaagagctggctgtatctgcaaacaccagtgctgtggtggatttaagtcac
tttggggagttcagacaaaagctaatgaatacatcttctacattgtcccaagttaatgac
actttgaggaaaacaagtgaactcataactgattcatcaaaagctgcattcacagctgaa
aaacaaattaaagaagttgaagcacaagcaagtcttttactggatagactcaaacctttg
aaaatgctagaggagaacctgaacagaaacctgtctgaaattaaagaacttatcagccag
gcccgcaagcaggcagcatctattaaagttgcagtatcagcagacagagattgcattcgt
gcctatcaaccccaaatttcatctacaaattacaacaccttaacactcaatgtgaaaact
gctgaaccagataacctccttttctacttgggtagcaatggaaagacagacttcctggca
ttggagatgcgacgtggtaaggtagctcttctttgggatttgggctccggatcaacaaga
gtggaataccctgattttcaaattgacaacaacaagtggcacagaatacatgccaccagg
ttcggaaaaacaggtacactcagcatagaggaaatgaactccaatcagaagccttcacct
aaatctggaacctctccggggacagctagcatactggatgttaacaagtcaaccctaatg
tttattggaggacttggagggcaaatcaagaaatcacctgctgttaaggtgacctatttt
aaagggtgcctaggagaggcatccctgaatggcaaatctgttggtctttggaactacgta
gaaagagagggcaagtgcaatggttgttttggaagcccacaggatgaggacacttcattc
cattttgatggcagtggatactcagttgtggagaaggcactccgctcaacagtgactcag
ataataatatttttcagtaccttttcaccaaatgggcttcttctgtatcttgcttcaaat
ggcactagagacttcttgtcccttgagcttgttgatggcaaagtgagggtgactgttgat
cttggttcaggacctcttgctcttacaacagaaaatcattacaacaatggaacgtggtat
aaaatctcattcaatcggaataaaaagcaaggagttttggcagtcatggatgcatataac
cttaattataaagaaaccaagcaaggagaatctcctggggttgcctcagacctgaaccgc
tctgataaggacccaatcttcattggtgggctgccaagatcgagggctctgaggaaaggt
cttaatagtagaatgtatgtgggatgcatcaagaatctggaaatatctcgttccaccttt
gacttgcttagaaattcatatggagtaagaaaaggctgtgtattggagcctattcacagt
gtgagcatcatgaacaatggatatattgagttggtacctaagtcattaagcccagagtca
gaactgatggcaacttttgctacaaagaacagcagtggcatcatccttgctggactcagc
aggggactggaaaagcgacaacgaagacaagcacacttgcctttcttttccatcatgctg
attgatggtcatcttgcagtgcatgttaatgctggagatagagcaagtactaggaaagta
gttcttcagtctgctaatggaacatacagtgatggacaagaacactctgtcatcctaatt
cggaataagaggatcataactgtacaggtggatgaaagtaaacctgcagaactaaggctt
ggttcagcagcagaaaatagccccattaatatttccaacttctacgctggtggcattcca
gcaggagagggcatcttagggttaaaattggccagctcctttcatggctgtatcagcaac
cttatttttaacaaggagcttttatatttcaccacttccatgaagtatgaacatgtggat
atggacagttgttttctgtcagagaagcctaacccagctgtacagccaatcgacattgtg
attcaacctgaatttcaggctttaccagttcccctgagacctctcacagatacaaaaaaa
gtagtttgtgcaaaagatgagctgcctgatcatgttcaaggtgcccatcagtttggactt
gccaaaggcagccacttgaccctgctcttcaatcagtctgctgtcaggaagaaactttcc
gtccagctgaatctcagaacctttgcctccagtggcctgatttactacatggctcaccaa
aaccaggttgattatgcagccctacagctttataggggacagctccatttctcatttgat
ttaggcaaaggaaaagcagtagctcttcaccctgctgttgtcagtgatggaaaatggcat
acggtaaagacggaatatgttaaaaggaagggcacaatcattgtggatggacaggaactg
gtaacagtcaatgttctgggagatggtagcaccttggatgtggaagggaagctgtatgtg
ggaggactccccttagactacgtgccaaagaatcttgggaatgttactcacagtatccct
gcctgcattggtagcatgacaattaatagcaaacaactggacaacgagagtcctgtctct
atctttgctgtgaacaaatgctatgaaacagtgcaggatggtactttctttgatggaagt
ggctttgcggctcttgtcagagaaggctacaaagtgcggtctgatgtgaacatcaccctg
gagttccgtacaacagcggtgcacggggttcttctcggggtcagcagtgccaaggttgat
gccattggactggaaattgtacatggcaaggttttattccatgtcaacaatggagctggc
agaataacggctacatacgaaccaagaggcacaaatagcttgtgtgatgggaaatggcac
aagcttcaagcaaacaaaagcaaacatcacatttcgctgataattgatgggaatttggtt
cacgctgaaaatccctacatccagtcaacatctgcagacacgaacaaccccatttatgtt
ggaggttatcctgctgatgtcaagcaaaactgcctcacaagcaagagctcattccgtggc
tgtttgaggaaccttgttttgaccaagggccaacatacagaattgtttgacttcagtaga
gcttttgacctgcgtggagtgtttcctcattcctgccctggggctgagcactga
DBGET
integrated database retrieval system
