Hirundo rustica (Barn swallow): 120749790
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Entry
120749790 CDS
T09369
Symbol
SPTBN1
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04517
IgSF CAM signaling
hrt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120749790 (SPTBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120749790 (SPTBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hrt04812
]
120749790 (SPTBN1)
Cytoskeleton proteins [BR:
hrt04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120749790 (SPTBN1)
Intermediate filaments
Intermediate filament-binding proteins
120749790 (SPTBN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SCAR_helical
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
120749790
NCBI-ProteinID:
XP_039913430
LinkDB
All DBs
Position
3:complement(11716634..11832692)
Genome browser
AA seq
2359 aa
AA seq
DB search
MTTTVATDYDNIEIQQQYSDVNNRWDVDDWDNENSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVSCRITDLYTDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKKSAKDALL
LWCQMKTAGYPNVNIHNFTTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFNL
AEQHLGLTKLLDPEDISVDHPDEKSIITYVVTYYHYFSKMKALAVEGKRIGKVLDNAIET
EKMIEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEKG
NLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVEAATKKHEAIETDIAAYEERVQA
VVAVAKELETENYHDIKRITARKDNVIRLWEYLLELLRARRQRLEMNLGLQKIFQEMLYI
MDWMDEMKVLLLSQDYGKHLLGVEDLLQKHALVEADIAIQAERVRGVNASAQKFATDGEG
YKPCDPQVIRDRVAHMEFCYQELCQLAAERRARLEESRRLWKFFWEMAEEEGWIREKEQI
LSSDDYGKDLTSVVRLLSKHKAFEDEMSGRSGHFQQAIKEGEDMIAEEHFGSEKIRERIK
DIREQWANLEQLSAIRKKRLEEASLLHQFQADADDIDAWMLDILKIVSSNDVGHDEYSTQ
SLVKKHKDVAEEIASYRPTIDSLHEQAKALPQEHAESPDVQGRLSGIEERYKEVAELTRL
RKQALQDTLALYKMFSEADACELWIDEKEKWLNNMQIPEKLEDLEVIQHRFESLEPEMNN
QASRVAVVNQIARQLMHSGHPGEKIKAQQDKLNTRWSQFRELVDRKKDALLSALSIQNYH
LECNETKSWIREKTKVIESTQDLGNDLAGVMALQRKLTGMERDLVAIEAKLSDLQKEAEK
LESEHPDQAQAILSRLAEINDVWEEMKTTLKNREESLGEASKLQQFLRDLDDFQSWLSRT
QTAIASEDMPNTLTEAEKLLTQHENIKNEINNYEEDYQKMRDMGEMVTQGQTDAQYMFLR
QRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPTTL
EGAEAAIKKQEDFMTTMDANEEKINAVVETGRRLVSDGNINSDKIQEKVDSIDDRHRKNR
EAASELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQAFMA
ELASNKEWLEKIEKEGMQLIAEKPETEAVVKEKLTGLHQMWDELESTTQTKAQRLFDANK
AELFTQSCADLDKWLNGLESQIQSDDYGKDLTSVNILLKKQQMLENQMDVRKKEIEELQS
QARALSQEGKSTDEVDGKRLTVEKKFLELLEPLNERKANLLASKEIHQFNRDVEDEILWV
GERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDIFERSQNIITESSPNAEV
IQQRLADLKQLWNLLIEETEKRHKRLEESHRAQQYYFDAAEAEAWMSEQELYMMSEEKAK
DEQSAVSMLKKHQILEQAVEDYAETVHQLSKTSRTLVADNHPESERISMRQSKVDKLYAG
LKDLAEERRGKLDERHRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFRE
FARDTGNIGQERVDTVNHMADELINSGHSDAATIAEWKDGLNEAWADLLELIDTRTQILA
ASYELHKFYHDAKEILGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDIQALGTQVRQ
LQEDAARLQAAYAGDKADDIQKRENEVLEAWKALLDACEGRRVRLVDTGDKFRFFSMVRD
LMLWMEDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKH
YASEEIKEKLLQLTEKRKEMIDKWEDRWEWLRLILEVHQFSRDASVAEAWLLGQEPYLSS
REIGQSVDEVEKLIKRHEAFEKSAATWDERFAALERLTTLELLEVRRQQEEEERKRQPPT
PEPKVTEDGDSQQQWDGTKGQQVSQNGLPSDQESPRVAETAETNEMVNGAAEQRTSSKES
SPVPSPTSDRKAKGGILAQTAATLPAKTQEIPSAQMEGFLHRKHEWETHSKKASSRSWHN
VYCVINNQEMGFYKDSKAAASGIPYHNEIPVSLKDAVCEVAVDYKKKKHVFKLRLTDGNE
YLFQAKDDEEMNTWIQAITSAISSDKIEVSPTTQSTPASSRAQTLPASVTITSESSPGKR
EKDKEKDKEKRFSLFGKKK
NT seq
7080 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaacggtagcgacagattacgacaacattgaaatccaacagcagtacagcgac
gtcaacaaccgctgggatgtcgacgactgggacaatgagaacagttctgctcggctgttt
gagcgctcccgcatcaaggccctggctgatgaacgtgaggcagttcagaagaagaccttc
acaaagtgggtgaattcccacttggctcgtgtgtcctgccgaattacagacctgtacact
gaccttcgagatgggaggatgctcatcaaactcctggaagtactttcaggagagagactt
cctaaaccaactaaaggaaggatgcgcatccattgcctggagaatgtggataaagccctc
cagttcctgaaagagcaacgagtacacctagagaacatgggatctcatgatattgtggat
gggaatcacaggctgacacttggccttatttggactattatcctgagattccagatccaa
gatatcagcgttgaaactgaggacaacaaagagaagaaatctgctaaagatgctttgctt
ttgtggtgccagatgaaaacagctgggtaccccaatgtcaacatccacaactttacaacg
agctggagggatgggatggcattcaatgcactgatccataagcacaggcctgatctgatt
gattttgacaagctaaagaaatcaaatgcacactacaatctgcagaatgcttttaacctt
gcagagcagcaccttggtcttaccaaactcctggaccccgaggatatcagtgttgatcac
cctgatgaaaagtcaatcatcacctatgtggtgacatattaccactacttctccaagatg
aaagctttggctgtcgaaggaaaacgtattggaaaggtgcttgacaatgctattgaaaca
gagaaaatgatagaaaaatacgagtcattggcttctgacctgctggagtggattgagcaa
accattatcatcctcaacaatcgcaaatttgccaactccctggttggggtgcagcagcag
ctgcaggcgttcaacacttaccgcacagtggagaaaccacccaaatttacagaaaaagga
aacctggaagtgctgctttttaccattcagagcaaaatgagagccaacaatcagaaagtg
tacatgccgagggagggcaaactcatctctgacattaacaaggcctgggaaagactggaa
aaagctgaacatgaaagagaactggcactgcgaaatgagctcatcagacaagagaaactg
gaacaacttgcacggagattcgatcgcaaggcagctatgagagaaacttggctgagtgaa
aatcaacgtctcgtttctcaggacaattttggctttgacctcccagcagtggaggctgcc
acgaagaagcatgaggccattgagacggacatcgcggcatatgaggagcgggttcaggcc
gtggtggcagtggcgaaggagctcgagactgaaaactaccacgacatcaaacgcatcact
gcgaggaaggacaatgttatccgcctgtgggagtatctcctggagctgctccgggcacgg
agacagcggctggagatgaaccttgggctgcagaagattttccaggaaatgctgtacatt
atggactggatggatgagatgaaggtgcttttgctgtcccaagactatggcaaacatttg
ttgggagttgaagacctgctgcagaaacacgctctggtggaagctgacattgctattcag
gctgagagagtgagaggggtcaatgcctctgctcagaagtttgccaccgatggagaaggt
tacaagccctgtgacccacaggtgatcagggaccgcgtggctcacatggagttctgctac
caggaactctgccagctcgcggccgagcgccgcgcacgcctcgaggagtcgcggcgcctc
tggaaattcttctgggaaatggctgaagaggaaggctggatcagggagaaggagcagatc
ctgtcatctgatgactatgggaaggatctaaccagcgttgtccgactcttgagtaaacac
aaggcgtttgaggacgagatgagtggccgcagtggccactttcagcaggcgataaaagaa
ggtgaagacatgatcgcggaagagcattttgggtctgagaagatcagagaaagaattaag
gatatccgggagcagtgggctaacctggagcagttatctgccattaggaagaagcggctg
gaggaagcctctctccttcaccagttccaggctgatgctgatgatattgatgcgtggatg
ttggacatcctcaagattgtctccagcaatgatgttggccatgatgaatattccactcag
tccttggtcaagaaacacaaagatgtggctgaagagattgcgagctaccggccgaccatc
gactctcttcatgagcaggccaaggccctgccacaggagcatgcggagtctccagatgtg
caaggcaggttgtctggaatcgaggagagatacaaagaggttgctgagctgacccggctg
cgtaaacaggccctgcaggataccctcgctctctataagatgttcagtgaggcagatgct
tgtgagctttggatcgatgaaaaggagaagtggctgaataatatgcagattccagagaag
ctggaggacctggaagtgatccagcacaggtttgaaagcttggagccagaaatgaacaac
caggcatcccgcgtggctgtggtgaaccagattgccaggcagctgatgcacagtggccac
cctggggagaagatcaaagcacagcaagataaactcaacacaaggtggagccagttcaga
gaactggtagataggaagaaagatgctctgctctctgccttgagtatccagaactaccat
cttgaatgtaatgaaaccaaatcctggatcagggaaaagaccaaagtgattgaatctaca
caagacctgggtaacgacctggctggagtgatggccttgcagaggaagctgacgggcatg
gaacgggacctggtggccatcgaagccaagctcagtgacctgcaaaaggaggcagagaag
ctggaatcggagcatcctgaccaggcacaagccatcctttcacggcttgcagagatcaat
gatgtgtgggaagaaatgaagaccaccctgaagaaccgggaagaatccctgggagaggcc
agcaagcttcagcaattcctgagagatctggatgacttccagtcctggctctccagaaca
cagactgcaatcgcctccgaagacatgccaaacaccctgacagaggctgagaagctgctc
actcagcacgagaatatcaagaatgaaatcaacaactacgaggaagattatcagaagatg
agggacatgggtgagatggtgacacaagggcagactgatgctcagtacatgttcctacgc
cagcgcctacaggctttggacactggctggaatgagcttcacaaaatgtgggagaacagg
caaaatctcctttcccagtctcatgcctaccagctgtttctcagagataccaagcaagca
gaagctttccttaataaccaggagtatgttctggcgcacacggagatgccaactaccttg
gaaggagcagaagctgctattaaaaagcaggaggatttcatgaccaccatggatgccaat
gaagaaaagatcaatgcagttgtggagacgggcaggaggctcgttagtgatgggaacatt
aactctgataaaatccaggagaaagtggattctattgatgacagacataggaagaaccgt
gaagcagccagtgaacttctgatgagactgaaagataacagagatctccaaaagtttctt
caggattgccaagagctctccctctggatcaatgagaagatgctcacagcccaggatatg
tcctacgatgaggcaaggaacctacacagcaagtggctgaagcatcaggcattcatggca
gagcttgcatccaacaaagagtggctggagaagattgaaaaggagggaatgcagctcatt
gcagagaaaccagaaactgaggctgtagtgaaagagaagctgacgggtctccaccaaatg
tgggacgagcttgaatccactacccagaccaaggctcagcgtctcttcgatgcaaacaag
gcagagctttttacccagagctgtgcagatctggataagtggctgaatggtttggagagc
caaatccagtcggatgactatggaaaagatctcaccagtgtcaacatcctgttgaagaag
cagcagatgctggagaatcaaatggatgtccgtaagaaggagatagaggagctgcagagc
caggcaagggctttgagccaagagggcaagagcacagatgaagtcgatggcaagcgcctt
actgtagagaagaaattcttggagctgctggagcctttgaatgagagaaaggccaacctg
ctggcctccaaagagatccaccagttcaaccgggatgtagaagatgaaattttgtgggtt
ggagagaggatgcctatagctacatctactgatcatggacacaacctccagactgtgcag
ctattaataaagaaaaatcagacccttcagaaagaaatccagggccaccagcctcgtatc
gatgacatttttgagaggagtcagaacattatcacagagagcagccccaatgctgaagtc
attcagcagagacttgcagacttgaagcagctgtggaacctcctcatcgaggagacggag
aagcgccacaagcgcctggaggagtctcacagggctcagcagtattacttcgatgcagcc
gaggctgaggcctggatgagtgagcaggagctctacatgatgtcagaagagaaagccaag
gatgaacagagtgctgtgtccatgctgaagaaacaccagatcttggaacaagctgtagaa
gattatgctgaaactgtgcaccagctttcaaagaccagcagaactttggtggcagataat
cacccagaaagcgagcgcatcagcatgcgccagtccaaggtggacaagctctatgcgggc
ctgaaggaccttgctgaggagagaaggggcaagctggacgagaggcaccggctgttccag
ctcaaccgcgaggtggatgacctggagcagtggatcgccgagagggaggtggtggcgggg
tcccacgagctgggccaggactacgaacatgtcacgatgctgcaggagcggttccgggaa
ttcgcccgggacaccgggaacatcgggcaggagcgggtggatactgtcaaccacatggct
gatgaactcatcaactccggccactcggacgctgccaccatcgccgagtggaaggacgga
ctcaatgaggcctgggcggatctcctggagctcattgacacgagaacgcaaatccttgca
gcctcttatgaactgcacaaattttaccatgatgccaaggagatcttaggacgtatccaa
gacaaacataagaagctgcccgaggagctcggtagagaccaaaacacagtggaaacacta
cagagaatgcacacgacgtttgagcacgatatccaggccctgggcacccaggtgcgacag
ctgcaggaggatgcagcacgcctccaggctgcctacgctggggacaaggccgatgacatc
caaaagagggaaaacgaggtcctagaggcatggaaggcactgctggatgcctgcgagggc
cgcagggtgaggctggtggacacaggagacaaattccgcttcttcagcatggttcgggat
ctcatgctgtggatggaagatgttatccggcagatagaagcccaggaaaagccaagggac
gtttcatctgtagagctcctcatgaataatcaccaggggatcaaagcagaaattgatgcc
cgaaatgacagcttcactacgtgcattgagcttggcaagtctctgctggccaggaaacac
tacgcatctgaggagatcaaggaaaagctcctgcagctgacagaaaagagaaaagaaatg
attgacaaatgggaagacagatgggagtggctgagactgattttggaggtgcaccagttc
tccagagatgcaagcgtggctgaggcctggctgctgggacaggagccctacctgtccagt
cgtgaaatagggcagagcgttgatgaggtggaaaaattaatcaagcggcacgaagcgttt
gagaaatccgcagccacctgggacgagaggtttgcagcgctggagagactgaccacgctg
gaactgctggaagtgcgtcggcagcaagaggaggaggagcggaagaggcagccacccact
ccagagcccaaggttacagaggatggagactcccagcagcaatgggacgggacaaaagga
cagcaggtttcccaaaacggtttgccctcagaccaggaatctccacgggtggcagaaact
gcagaaaccaacgaaatggtcaatggagctgcagaacagaggacgagttccaaggagtcc
agtcccgttccttccccaacgtcagaccgcaaagcaaagggcggcattctggcccagact
gctgctaccctcccagccaaaacccaggagattccctcagcccagatggagggcttctta
caccgcaagcacgagtgggagacacacagcaagaaagcctccagcaggtcatggcataat
gtgtactgtgtcataaacaaccaagagatgggcttctacaaggactcgaaagctgcagcg
tctggcatcccttaccacaatgagatccctgtcagcttaaaggacgcagtctgtgaagta
gcagtcgattacaaaaagaagaagcatgtgttcaagctcagattgaccgatggcaacgaa
tacctcttccaagccaaagacgatgaggagatgaacacgtggattcaggccatcacatca
gcgatctcttcggacaaaatcgaagtgtccccgaccacccagagcactccagcctccagc
cgtgcccagaccctgcctgccagcgtcacaataaccagcgagtccagccctggcaagcgg
gagaaagacaaagagaaagacaaagagaaaagattcagcctttttggtaaaaagaagtga
DBGET
integrated database retrieval system
