Hirundo rustica (Barn swallow): 120749916
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Entry
120749916 CDS
T09369
Symbol
XPO5
Name
(RefSeq) exportin-5 isoform X1
KO
K14289
exportin-5
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120749916 (XPO5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrt03016
]
120749916 (XPO5)
03036 Chromosome and associated proteins [BR:
hrt03036
]
120749916 (XPO5)
Transfer RNA biogenesis [BR:
hrt03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
120749916 (XPO5)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
120749916 (XPO5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exportin-5
Xpo1
IBN_N
TPR_IPO5
Motif
Other DBs
NCBI-GeneID:
120749916
NCBI-ProteinID:
XP_039913798
LinkDB
All DBs
Position
3:complement(37999562..38028599)
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AA seq
1219 aa
AA seq
DB search
MSAEQVSGLCEQLVKAVTVIMDPASTQRYRLEALKFCEEFKEKCPICVPCGLKLAEKTQT
AIVRHFGLQILEHVVKYRWNNMPRLEKVYLKNNVMGLISSGTQSILEEESHIKDVLSRIV
VEMIKREWPQHWPDMLKELDTLSKQGETQTELVMFILLRLAEDVVTFQTLPTQRRRDIQQ
TLTQNMEKIFSFLLTALQQNVSKYRCMVGAPQEQEVLTTPQKTDMAQEPKAQANCRVGIA
ALNTLAGYIDWVALSHITADNCKLLEMLCLLLNEPELQVGAAECLLIAVSRKGKLEDRKP
LMVLFGDVAMHCILSAAQTADGEGLVEKHYVFLKRLCQVLCALGSQLCALLGSDCDVETP
ANFGKYLESFLAFTTHPSQFLRSSTQITWGALFRHEVLSHDPLLLAVVPKYLRASMTNLV
KVGFPSKADSPSCEYSRFDFDSDEDFNAFFNSFRAQQGEVMRMACRLDPLTGFQMAGEWL
KYQLTAPVDTGPMNSKTGEGLCSIFSPSFVQWDAMTFFSESVISQMFRTMDKDEIPVNDG
IDLLQLVLNFETKDPLILSCVLTNVSALFPFVTYRPEYLPQVLSKLFASVTFEVVEESKF
VVSVQAPRTRAVKNVRRHACSSIIKMCRDYPQLVLPNFEMLYNHVKQLLSNELLLTQMEK
CALMEALVLISNQFKDYERQKAFLEELMAPVAGLWLSPEMQRVLSDPEAFISYVGADNKI
ADPVLEDPSGLNRSRISFCVYTILGVVKRARWPAATEEAKAGGFFLGYLPSGTPMYRNPC
TEQVLKLFDNLLALIRTHNNLYMPEMVARLGDTFAKALDMLEVEKNAILGLPQPLLELYD
SPVYKTVLERMQGFFCTLYDNCFHILGNAGPSMQQDFYTVEGLATQLLSSAFNNLNNIPD
YRLRPMLRVFVKPLVLSCPSEYYETLVCPMLGPLFTYLHMRLSQKWQVINQRSMLCEDDA
ADDSPESQEMLEEQLVRLLTREVMDLATVCCVSKRGVEQNTTAAVDGDDDEAMATEVTPP
ANAELTELGKCLMKQEDVCTAVLITAYTSLSWKDTLSCQRTTTQLCWPLLKQVLPGNLLP
DAVSWFFTSVLKGLQVHGQHDGCMAALVHLAFQIYEALRPRYGELKAVMEQIPDIQLDSL
EQFDSKLLNPTLQKVADKRRKDHFKRLISGCIGKPIGEQFRKEVHIRNLPSLFKKVKPSL
ETDVLENEDGEGFNVLFEP
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgagcaggtgagcggcctctgcgagcagctggtgaaggcggtgaccgtcatc
atggacccggcgtccacgcagcgctaccgcctggaggccctcaagttctgcgaggagttc
aaggagaagtgtcccatctgcgtgccctgcgggctgaagctggcggaaaagacgcagacg
gccatcgtccggcacttcggcctgcagatcctggagcatgtggtgaaataccgctggaac
aatatgcctcgcctagaaaaagtttatctaaagaacaatgttatgggcctcatatccagt
ggaactcaaagcatcctggaggaggaaagtcacattaaggatgtgctgtctcgcattgtg
gtggagatgatcaagcgggaatggcctcagcactggcctgacatgctaaaggagctggat
accctctccaagcaaggggaaactcagacagaactggtgatgttcatcctcctacgtttg
gcagaggatgtggtgacttttcaaactctacctacccagcggcgacgagatatccagcaa
accctcacccagaacatggaaaagatcttcagcttcctactaactgccctgcagcagaat
gtcagcaagtacagatgcatggttggagcaccccaggaacaagaagtcctcaccactcca
cagaagactgatatggctcaggaaccgaaggcccaggcaaactgtcgtgtggggatagcg
gcactcaacactttggctggctacattgactgggtagccctaagccatattacagcagac
aactgcaagctcttggagatgttgtgtctgctcctaaatgagcctgaactccaagttgga
gcagcagagtgtctcctgattgctgtcagcaggaaaggtaagctggaggatcggaagcct
ctgatggtcttgtttggagatgttgccatgcactgcatcctctctgctgcccagacagca
gatggagaaggcctggtggagaagcactatgttttcttgaagagactttgccaagttctg
tgcgcgttgggcagccagctatgtgcgttgctaggctcagattgtgatgtggaaacacca
gccaactttggaaaataccttgagtcatttttagccttcacaacccatcccagccagttt
ctgcgctcttccactcagatcacatggggagccctctttcggcatgaagttctgtctcat
gaccctttgttgctggctgtcgttcccaagtatctccgtgcatctatgaccaacctggtg
aaggtgggctttccttccaaagcagacagccccagctgtgaatactcacgttttgatttt
gacagtgatgaggacttcaatgccttcttcaactctttccgagcccagcaaggagaggtc
atgaggatggcttgtcgtctggaccccctaacaggcttccaaatggctggtgaatggctg
aagtaccaactcacagctcctgttgatactggacccatgaactctaagacgggcgaaggt
ctctgctccatcttctctccgtcctttgtgcagtgggacgccatgaccttcttctcggag
agcgtcatcagccagatgtttcgaactatggataaagatgaaatcccagtgaatgatggc
atagatctgctgcagcttgttcttaattttgaaacaaaagatcctctcatcctgtcctgt
gtgctcaccaatgtctctgctctctttccatttgtcacttaccgaccagaatacctcccg
caagtactttccaagctgtttgcttcagttacttttgaagttgtagaagaaagtaagttt
gttgtgtctgtccaggctcctagaactcgagcagtgaagaatgtgagaaggcatgcgtgc
tcctcaatcataaagatgtgccgggattaccctcagcttgtcttgccaaactttgagatg
ttgtacaaccacgtgaaacagctgctgtcaaatgagctacttcttacgcagatggagaag
tgtgctcttatggaggcccttgtcctcatcagcaaccaatttaaggactatgagcgacag
aaagctttcctggaggagctcatggctcctgtggctggcttatggctctccccagagatg
cagagagtcctctcagatcctgaagcctttatatcctatgtgggtgcagacaacaaaatt
gctgatccagtcttggaagatcctagtggcctgaaccggtctagaataagcttttgtgtg
tacaccattctgggagttgtgaaacgagctcgttggcctgctgctactgaagaggcaaaa
gctggaggattctttttgggatacctgcccagtggaactccaatgtaccgtaatccctgc
actgagcaagtcctgaagctttttgacaatttacttgctctcataaggactcacaacaac
ctctacatgccagagatggtggctaggctgggggatacatttgccaaggccttggacatg
ctggaggtggagaagaatgccattctaggtctccctcagcctctgctggagctttatgac
tctcctgtttacaaaacagtcttagaaaggatgcagggtttcttttgtaccctctacgac
aactgttttcacatcctgggaaatgcaggcccctccatgcaacaggatttctacaccgtg
gagggtctcgccacccagctcctcagctctgctttcaacaacctcaacaacattcctgat
tacagactgcgtcccatgctccgtgtgtttgtgaagcccttggtactttcctgcccctca
gaatactacgaaacccttgtctgccccatgctgggaccactcttcacctatctgcacatg
aggttgtcccagaaatggcaggtgatcaaccagcgaagcatgctctgtgaggatgatgct
gcagatgacagccccgagtctcaggagatgcttgaggaacagctggtcaggctgctgact
cgagaagtcatggatctcgccactgtttgctgtgtttcgaagagaggtgttgaacagaac
actactgctgctgtagatggagatgatgatgaggcgatggccacggaggtgactccccct
gccaacgcagagctcaccgagctcggcaagtgtctgatgaagcaagaggatgtttgcact
gcagtgctgatcactgcctacacctccctgtcctggaaggacaccttgtcctgccaaaga
accacaacacagctttgctggccactgctcaaacaggtgcttccaggaaacctccttccc
gatgctgtgtcctggtttttcacaagtgtgctgaagggcttacaggtacatgggcagcac
gatggctgcatggcagctcttgtccacctggctttccagatctacgaggccttgcgccct
cgctatggtgagctgaaggcagtgatggagcagatccctgacatccagctggactctttg
gagcagtttgattcaaagcttctcaacccaacactgcagaaagtggcagacaagcgccgg
aaggatcacttcaagcgcctcatctcaggttgcattgggaagcccatcggggagcagttc
cgcaaggaggttcatatccggaaccttccatctctcttcaaaaaggtgaagccatcactg
gagacagatgtgctagaaaacgaggatggagagggcttcaatgtactctttgaaccctga
DBGET
integrated database retrieval system