Hirundo rustica (Barn swallow): 120749917
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Entry
120749917 CDS
T09369
Symbol
POLH
Name
(RefSeq) DNA polymerase eta
KO
K03509
DNA polymerase eta [EC:
2.7.7.7
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
120749917 (POLH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrt03400
]
120749917 (POLH)
Enzymes [BR:
hrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
120749917 (POLH)
DNA repair and recombination proteins [BR:
hrt03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
120749917 (POLH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
POLH-Rev1_HhH
zf_UBZ
IMS_HHH_1
IMS_C
Motif
Other DBs
NCBI-GeneID:
120749917
NCBI-ProteinID:
XP_039913802
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All DBs
Position
3:38028828..38038164
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AA seq
709 aa
AA seq
DB search
MSRGRERVVALVDMDCFFMQVEQRLDPQLRGRPCAVVQYSEWQGGGIIAVSYEARAFGVS
RGMWASEARALCPELALARVPQARGKADLTRYREASAEVMRVLSRFAAIERASIDEAYLD
LTGSARHRLRDLRGRPLPAALLPSTFVQGLPGEPGPDPGGKGTRRADPGGKEELRQRGLD
EWLASLSFDNPDCPDLQLTMGAVIVEEIRVAVEEATGFRCSAGISHNKTLAKLACGLNKP
NRQTLVSARFVPQLFSQLPVSSIRNLGGKLGTAITDMLGVEYIGELTQFSETELQTHFGD
KTGSWLYDLCRGIEEEPVKDRYLPQSIGCSKNFPGKLALATQKAVQHWLLQLALELESRL
NKDRSQNHRVARQLMVVIRQQGDTRVSRLCALSRYDAQKMCNDAFTLIQNCNVAGAHQAA
WCPPLISVQLSAGKFSEPVTLSTGIATFLTGDTQPDGTGTTTQNATSCGRARVRFFRSPS
KELRQKPGSAIESFFQKAAERQLTQAAAATSLPTVAAAESAMPSSPEHQERAAVGLPVGI
PSVHCDLESSVKQSPSDASPASLHERLSQEKLPLDATQTPSTPPSSRTLLKSETAMEGNE
QNLPPSPELTLLPPASPGDQQRCEKCDQLVLMWEFPEHMDYHFALELQSSFLEPSPPIAP
EAPSNAKAVASRSPAKAKNKPRTPAGSSAKRPKEAVTRTLDFFFKPLPP
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggggccgggagcgcgtcgtggccctggtagacatggactgcttcttcatgcag
gtggagcagcgcctcgacccgcagctgcgcggccgcccttgcgccgtggtgcagtacagc
gagtggcagggcggagggatcatcgcggtgagctacgaggcgcgcgccttcggcgtgtcc
cgcgggatgtgggcgtcggaggcgcgggcgctgtgccccgagctggcgctggcccgggtg
ccgcaagcgcggggcaaggcggacctcacgcggtaccgagaggccagcgcggaggtgatg
cgggtgctgtcgcgcttcgccgccatcgagcgcgcgagcatcgacgaggcgtacctggac
ctgacgggcagcgcgcgccatcggctgcgcgacctgcgcgggcgccccctgccggccgcg
ctgctccccagcaccttcgtgcagggactgcccggagagcccggccccgatcccggcggg
aagggcacgcgccgagccgatcccggcgggaaggaggagctgcggcaacgtggtttggac
gagtggctggcgtcgctgtctttcgataaccctgattgtcctgacctgcagctgaccatg
ggcgcggtaattgtggaagaaattcgggtggcagtggaagaagctaccggattcaggtgt
tcagctggcatttcgcacaacaagacactggcaaaactggcctgtggcttgaacaagccc
aaccgccagacactggtgtctgcacgatttgtgccgcagctcttcagccaactgcccgtc
agcagcatccgaaacctgggaggcaagcttggcactgctatcacagacatgctgggagta
gagtacatcggggagctgacacagttcagtgagactgagctccagacgcattttggagac
aaaactgggtcttggctctatgacttgtgcagagggattgaagaggaacctgtaaaagac
cggtacctgccccagtctattggctgcagcaagaacttcccggggaagttagccctggcc
acacagaaggcggtgcagcactggctcctgcagctggccttggagctggagtccagactg
aacaaggacaggagccagaaccaccgcgtggcccggcagctgatggtggtgatccgccag
caaggggacacccgcgtgtctcgtctgtgcgccctgtcccgctacgacgcgcagaaaatg
tgcaacgacgccttcaccctcatccaaaactgcaacgtggctggggctcaccaggcagca
tggtgtccaccgctgatttcagtgcaactctcggcaggcaagttctcggagcctgtcacc
ctctctacaggcattgccaccttcctgacaggtgatacccagcctgacggcactggcacc
accacccaaaatgccacatcttgtgggagggccagggtcaggttctttaggagcccaagc
aaagaacttcggcagaagccaggtagcgctattgagtcattcttccaaaaggcagcggaa
cggcagctgacacaggcagcagcagcaaccagcttgcccactgtagccgctgcggagtca
gctatgcccagctccccagagcaccaagaaagagctgctgttggcttgcctgttggaatt
ccctctgtgcattgtgacctggagtcctctgtgaagcagagtcccagcgatgccagccct
gcttctctgcacgagaggctttcccaggagaagttgccattagatgctacacaaacaccc
tcaactccacccagctccaggacccttctgaaatcagaaacagctatggagggaaatgag
cagaatttgccaccctctcctgagctcaccctgctgcctcctgcctctccaggtgaccag
cagcgctgtgagaaatgtgaccagcttgtgctgatgtgggagttcccagagcacatggac
tatcactttgctctggagctgcaaagctctttcctggagcccagccctcccattgctcca
gaagcaccttccaatgcaaaggctgtggcttccaggtctcctgccaaggcaaagaacaag
cccagaactccagcaggatctagtgccaaacgacccaaagaagctgtgacaagaacttta
gattttttctttaagcccttacctccttaa
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