Hirundo rustica (Barn swallow): 120749937
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Entry
120749937 CDS
T09369
Name
(RefSeq) SAM and SH3 domain-containing protein 1-like isoform X1
KO
K23705
SAM and SH3 domain-containing protein 1
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
120749937
Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
120749937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SASH1_Homeodomain
SPIDER
SAM_1
SAM_2
SH3_2
SH3_1
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-GeneID:
120749937
NCBI-ProteinID:
XP_039913876
LinkDB
All DBs
Position
3:complement(48553964..49082991)
Genome browser
AA seq
1508 aa
AA seq
DB search
MCTNIVYEWLKTLQLPQYAESFVDNGYDDLEVCKQIGDPDLDAIGVAVPHHRRRIHEAVR
RLKEADERAAGLYFTLEPPPPPPAPAGRCPRRAGGPEEPRRGAAPRARPPGRRGAAGAGG
LVAYPRLKLKIMIRDKLIRDGINLSKPPYSNKDGSLGNIDDLAQQYADYYNTCFTDVCER
MEELRKRRVSQDLDLEKPDASPTSLQLRSQIEESLGLSSTASTPDTERKLSIHKSSSEEG
SVGKADWKKKNKFFWQNFRKNQKGLMRQTSKGEDVGYVASEITMSDEERIQLMMMVKEKM
ITIEEALARLKEYEAQHRQSSTVDATEWPDGSYSTLDGSSNCNSREQSDDETEESVKFKR
LHKLVNSTRRVRKKLIRVEEMKKPSTEGVEEHSLDNSPVLDDRSALYSGVHKKQFYFDSS
CEKQPEDDSDSLTTSPSSSSLDTWGANRKLVKTFSKTDSRGLIKPPKKLGTFFSYPEEEK
SQKVCRSLTDGEMKKSLGSLSHGVSTESICFYGSNRHKHHLLVSLEEIQSVRKQIRLKKM
DTNYSCSRAFLCQRPARKGASPTTCDLQLLRHKTKGGGGCGFPNRRLRGRTSVSEFNITY
VVERSLYSHLNLSQLVRPVADRTLSKADKQDLRRCLLEEDEEAKRKWAATVDRCTKRVLL
RIHQKSRTCSFGGFDLTNRSLHIGSSSDQMGKEGDFVYKEVIKSPSASRISLGKKVKSVK
ETMKKRMSKKYSSSLSEQESSPGIVPGSPQSPPPDTDSLDKPKLKAGGSVESLRSSLSGQ
SSMSGQTVSTTDSSTSNRESVKSEDGDDEEPPYRGPFCGRARVHTDFTPSPYDTDSLKLK
KGDIIDIISKPPMGTWMGLLNNKVGTFKFIYVDVLNEEEEKPKRPTRRRRKSRPPQPKSV
EDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDELNIRDPEHRAVLLTAVELLQEYD
SNSDQSGSQEKLLIEGQGLTGCSPRDSGCYESSENLENGKTRRTCLPPSKSASEHSFRDF
SRNQLSNYPTLPLTKSIETLQPGEKESRLGCAHRALKSSVKPPAITGLKKNRRSLPVAVC
RSYETLDGPQGVDAWPRSHSLDDLQGEPNTNLQDVNKKVGSFPQDSLDIAKKASGSALPP
QSHGGSSKVDDVTAKPGRGPANSQKGRAKELNCSVMETAGGKPAVFPLKNCEAQPALMMH
HATRTPLEIQSKGFHDLARADYAPVLKGGLEAEQKSTNEARMQPKNPSQPPPVPAKKCRE
RLSNGLYHPPTTASGNHSSLEAPCLPVKKTSSSTPIDCHGVPVHRTSSEQEPSSPPSPLP
PWLSELPETASVQQHVVKLGPASARKVSCSRGMDLEMVIENKLQSEDIDLTEEPYSDKHG
RCGIPEALVQRYSEDLEQPEKDVATNMDQIRVKQLRKQHRMAIPSGGLTEICRKPVSPGL
ITSVSDWLISIGLPMYSSLLTEAGFNTLSKVPSLSQTCLQKAGITEERHISKLLAAARLF
KPLDPEAI
NT seq
4527 nt
NT seq
+upstream
nt +downstream
nt
atgtgcaccaacatagtctacgagtggctgaagaccctgcagctcccccagtacgcggag
tccttcgtcgataatggctacgacgacctggaggtctgcaagcagatcggcgacccggac
ctggatgccatcggcgtggccgtgccccaccaccggcgccgaatccacgaagccgtgcgg
cggctgaaggaggcggacgagagggcggcggggctctacttcaccctggagccgccgccg
ccgccgcccgcccctgccgggcgctgcccccgccgggcggggggcccggaggagccccgg
cgaggggcggcccccagggcccggcccccggggcggcggggagcggccggggccgggggg
ctggtcgcgtaccccaggctgaagctgaagataatgatccgcgacaagctcatccgcgac
ggcatcaacctgagtaaaccgccctactccaacaaggacgggtcactgggaaatattgat
gatctggcacagcagtatgcagactactataacacctgcttcacagatgtgtgtgagagg
atggaagagctgcgcaagcgaagggtttcccaagaccttgatttggagaaacctgatgcc
agccccacatctctacagctgcgatcccagattgaggaatcacttggtctcagcagcacc
gcatcaacacctgacactgaaagaaagctctccattcataaatcaagttcagaagaaggc
tctgtagggaaagcagactggaaaaagaaaaataagtttttttggcagaatttccgaaag
aaccagaaagggctaatgaggcagacttcaaaaggagaggacgtcggttatgtggccagt
gagatcacaatgagtgatgaggagcggatccagctgatgatgatggtgaaagagaagatg
atcaccattgaggaagcacttgctaggctgaaagagtatgaagcccagcacaggcaatcg
agcactgtagatgctacagaatggcctgatggttcttactcgacacttgatgggtcttcc
aattgtaattcaagagaacaatccgatgatgaaacagaggagtcggtgaagtttaagagg
ttgcacaagctggtgaattctactcgcagagtcaggaagaaactcataagagttgaagaa
atgaaaaaacccagcacagaaggtgtggaagagcactcacttgacaactctcctgtactg
gatgacagatcagcactttactctggagttcacaagaagcaattctactttgacagctcc
tgtgaaaagcagccagaggacgactcggactcacttactacttctccctcatccagcagt
cttgatacttggggagctaaccggaagctggtgaaaaccttcagcaaaaccgatagccgt
ggccttatcaagcctcccaagaaacttgggacatttttctcttatccagaagaggagaag
tcccagaaagtttgccgctccttgacagatggggaaatgaagaagagcctcggctcgctg
agccacggggtaagtacagaaagcatttgcttttatggcagcaacaggcacaagcaccat
cttctggtgtccctggaggagattcagagtgtaaggaagcagatccgattgaagaaaatg
gatactaactattcctgttccagagcttttctttgccagcgccctgctaggaaaggagca
tcccccaccacttgcgacctgcaattactgcggcacaaaacgaaagggggtggaggttgt
ggcttcccaaacagaaggctacgagggcgcacctctgtcagcgagttcaatattacctat
gtggtggagagaagcctgtacagtcacctcaacctctcacagctggtgcgtcccgttgct
gacaggaccctgagcaaggccgacaagcaggacctgaggagatgcctgctggaggaggat
gaggaggccaagaggaagtgggctgccacagtggatcgctgtactaaaagggttctcttg
agaatccaccaaaagtctagaacctgtagctttggaggctttgatttgacaaatcgttcc
cttcatattggaagcagttctgaccaaatgggcaaagaaggagactttgtttataaagaa
gtgatcaaatcaccctctgcctcccgtatatctctgggtaaaaaggtgaagtctgtaaaa
gaaaccatgaagaaaaggatgtcaaaaaaatacagcagctctttgtctgagcaggagtcc
agccctgggatcgtgccgggttccccacagtctccaccaccagatactgactccctggac
aaacccaagctgaaagctggcggctcagtggagagcctgaggagttccttaagcggtcag
agctcaatgagtggtcagacagtgagcacaacagattcctcaaccagcaacagggagagt
gtgaaatcagaagatggtgatgatgaagagcctccttacagaggacctttttgtggaaga
gccagggttcacactgattttactccgagtccttatgatacggattccctgaagctcaag
aaaggtgacatcattgatatcatcagcaaaccccctatgggcacttggatgggtctgctg
aacaacaaagttggcaccttcaaatttatctatgtggatgtgctaaatgaagaggaagag
aagccgaagaggcccaccaggagacgtcgaaaaagtagaccaccccagcccaagtcagtt
gaggatctcttggatcgcatcaatttgaaggagcacatgcccacttttctgttcaacggt
tatgaagatctggatacctttaagcttttagaagaagaagatttggatgaactgaacatc
cgagatcctgagcacagagctgttctcctcacagcagtggaacttcttcaggaatatgat
agtaacagcgaccagtcaggatctcaggagaaacttctcattgaaggccaaggcctaacc
ggatgctctcctcgggattctggctgctacgaaagcagtgaaaacctggagaatggtaaa
actcgaaggacctgtcttccgccctcaaaatcagcaagtgagcatagctttagggatttc
agcagaaaccagctatcaaattatcccacacttccactgaccaagtcaatagaaactctg
cagccaggggaaaaagaaagccggctgggttgtgctcatcgtgctctgaagagctctgtc
aagcctccggccatcacgggtctgaagaagaaccgcagaagtttaccagttgccgtgtgt
cgaagctatgaaactctggatggcccccagggtgtagatgcatggccaagatctcactca
ctggatgatctccagggagagcccaatactaatttacaggacgttaacaagaaagtaggt
tcttttcctcaggattcactggatatagctaaaaaggcaagtggctctgccttgccgcct
cagtctcatggaggcagctctaaggtagatgatgtcacggctaagccgggcagaggacct
gctaattctcagaagggaagagctaaggaattgaactgctctgtaatggagactgcaggt
ggaaagcctgctgtgttccccctgaaaaactgtgaagctcagcctgccttaatgatgcat
catgcaacaaggacacctctggaaatccagagtaaaggttttcatgaccttgcacgggct
gattatgctccagtcctcaagggaggtctagaagctgagcaaaaaagcacaaatgaggca
agaatgcaaccaaaaaatccttctcagccgccacctgtccctgccaaaaaatgccgagaa
cgcctttctaatggattatatcatcctcccacgaccgcaagtggaaaccactcaagttta
gaagcaccatgtttgccagtaaaaaagaccagctcatccactcccattgattgtcatgga
gtacctgtccataggacatcttctgaacaggagcccagtagccctcccagcccgctgcca
ccctggctgtcagagctcccagagactgctagtgttcagcagcatgtggtaaagctcggt
cctgcgtcagcaaggaaagtctcttgcagcagaggaatggatctggaaatggtcatagaa
aacaagctgcagtctgaagacattgatcttactgaagaaccatactcagacaagcatggt
cgctgtggcattcctgaggctttggtacagaggtactctgaagacttagagcagcctgaa
aaggatgtggctacaaacatggaccaaatccgggtaaagcagctgaggaagcagcatcgc
atggcaattccaagtggaggactcacagaaatttgccgtaaacctgtatccccaggactc
atcacctctgtatctgactggctgatttccattggcctgcctatgtattccagcctgctc
acagaagcaggattcaacacactgagcaaagtgccttctctgtcacaaacttgccttcaa
aaagctggcatcacagaggaaaggcacataagcaagctcctggcagcagcaagactcttc
aaacctcttgatccagaggcaatttaa
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