Hirundo rustica (Barn swallow): 120749951
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Entry
120749951 CDS
T09369
Symbol
MED23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120749951 (MED23)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
120749951 (MED23)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
120749951
NCBI-ProteinID:
XP_039913922
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Position
3:60446951..60491289
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AA seq
1383 aa
AA seq
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MAIPMVPMETQLQSIFEEVVKTEVIEEAFPGMFMDTPEDERTKLISCLGAFRQFWSSLSQ
ESHEQCVQWIVRFIHSQHSPKRISFLYDCLAMAVETGLLPPRMVCESLINSDTLEWERTQ
LWALTFKLVRKIIGGVDYKGVRDLLKVILEKILTIPNTVSSAVVQQLLAAREVVAYILER
NACLLPAYFAVTEIRKLYPEGKLPHWLLGNLVSDFVDTFRPTARINSICGRCSLLPVVNN
SGAMCNSWKLDPTTLRFPLKGLLPYDKDLFEPQTALLRYVLEQPYSRDMVCNMLGLNKQT
LNIAQHKQRCPVLEDQLVDLVVYAMERSETEEKFDDGGTSQLLWQHLSSQLIFFVLFQFA
SFPHMVLSLHQKLAGRGLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKE
YIPVPDINKPQSTHAFAMTCIWIHLNRKAHSDNSKLQIPIPHSLKLHHEFLQQSLRNKSL
QMNDYKIALLCNAYSTNSECFTLPMGVLVETIYGNGSMRTPLPGTNCMASGSITPLPMNL
LDSLTVHAKMSLIHSIATRVIKLAHAKSSVALAPALVETYSRLLVYMEIESLGIKGFISQ
LLPTVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAAVPQTNQNQLHLCVES
TALRLITALGSSEVQPQFTRFLNDPKTALSAESEELNRALILTLARATHVTDFFTGSDSI
QGTWCKDILQTIMSFTPHNWASHTLSCFPAPLQVFFKQNNVPQESRFNLKKNVEEEYRKW
KSMTSENEIITHFSAQGSSPLFLCLLWKMLLDTDHINQIGYRVLERIGARALVAHVRTFA
DFLVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRSHEGNEAQVCYFIIQ
LLLLKPNDFRNRVSDFVKENSPEHWLQNDWHTKHMSYHKKYPEKLYFEGLAEQVNPPVQI
QPQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGGLYKFHDRPVTYLYN
TLHYYEGHLRERTNLKRKLVHAIIGSLKDNRPLGWCLSDTYLKCAMNPREENPWVPDDAY
YCKLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELMALAVPGKEVGNALL
NVVLKSQPLVPRENITAWMNAIGLIITALPEPYWIVLHDCIVNVINSPSLTSETEWVGYP
FQLFDFTACHQSYSEMSCSYTLALAHAVWHHSSIGQLSLIPKFLTEALIPIVKTEFQLLY
VYHLVGPFLQRFQQERTRCMIEIGVAFYEMLLNADRYSSHLNYMDPICDFLYHMKYMFTG
DSVKDQVEKIICNLRPALKLRLRFITHISKMEPAAVSQQPLSNGSPAQQPSQVPVNVALP
VTQ
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atggcgatccccatggtgcccatggagacgcagctgcagagcatcttcgaggaggtggtg
aaaacagaagtaattgaagaagcttttcctgggatgtttatggacactcctgaagatgag
agaaccaaactgatcagctgcctgggagcttttagacagttctggagcagtctttcccag
gagtcccatgaacaatgtgtccagtggattgtaagattcattcatagccaacatagtcct
aaaagaatttcttttctttatgactgcctagcaatggcagtagaaactggacttctgccc
cccaggatggtttgtgaatctctgataaactctgatacacttgagtgggaaaggactcaa
ctgtgggcattaacatttaaattggttcggaagattattggaggtgtagactacaagggt
gtgcgtgatctgctgaaagtgatcctagagaaaatcctaacaattccaaatactgtgagc
tcagctgttgtacagcagcttctagcagcaagagaggtggtagcctacatcttggaaaga
aatgcttgtttactgcctgcctactttgcagttacagaaatcaggaaactatatcctgaa
ggaaaacttccccactggttactaggtaatttagtatcagattttgtggataccttcaga
cctacagcaagaataaattctatttgtggtcgctgtagtctccttcctgtggtaaataac
tcgggtgctatgtgtaactcatggaagctggatcctacaacccttcgttttcctttgaaa
ggtctcctaccatatgataaggatctgtttgagccgcagactgctttgttgagatatgtg
ctggaacagccgtattcaagagatatggtctgcaatatgctaggtctgaataaacagacc
ttgaacattgctcagcacaagcaacgttgccctgtgctggaggaccagctggtggacctt
gtggtgtatgccatggaacggtctgagactgaagagaagtttgatgatggtggaaccagt
cagcttctgtggcagcatctctccagccagctcattttctttgtgctctttcagtttgca
agttttcctcatatggtcctgtctctccatcaaaagttggcaggccgtggtctcattaag
gggagagaccacctgatgtgggtgctactccagttcatctctggcagcatccagaagaat
gcactggctgacttcctcccagttatgaagctgtttgacctcctgtatcctgagaaagaa
tatattcctgtacctgatattaacaaaccccagtcaactcatgcttttgcaatgacctgc
atttggattcatctgaaccggaaggcccatagtgacaactccaagttgcagattcccatt
cctcattctcttaaacttcaccatgagtttttgcaacagagcttgaggaataaaagctta
cagatgaatgactacaaaattgccttgttgtgcaatgcttactcaaccaattcagagtgt
ttcactttgccaatgggtgttctagtagagactatttatggaaatggcagcatgaggaca
cctcttccagggactaattgcatggcatcagggtctatcaccccattgccaatgaacctc
ttggactcactcacagttcatgccaaaatgagtctgattcacagcatagctacaagggta
attaagttggctcatgcaaaatctagtgtggccttggctcctgctctggtggaaacctat
agtcgcctgttggtttatatggaaatagaatccttgggcatcaaaggctttatcagtcag
ctcctgccaacagtgtttaaatctcatgcatggggaattttgcatactctgctggaaatg
ttcagctatcggatgcatcacatccagcctcattacagagtccagctcctcagccatctt
cattccttggctgctgtgccacagactaatcagaaccagcttcatctctgtgttgagagt
actgctctaaggctaatcacagctttgggcagctcggaagttcaaccacagttcacacgg
ttcctcaatgatcccaaaacagctctttcagcagaatcagaagaactcaacagggctttg
atcttaactctggcaagggcaacacatgtgacagacttcttcacaggctctgattcaatt
cagggaacttggtgcaaggacatactgcagactatcatgagtttcactccacataactgg
gcatcacatactctaagctgttttccagctcctctgcaggtgttcttcaagcagaacaac
gtgcctcaggaaagccggtttaatctgaagaagaatgtggaagaagaataccggaagtgg
aagtcgatgaccagtgagaatgaaataatcacgcacttctctgctcaaggttcatccccg
cttttcctttgtctcctgtggaagatgttgttagacactgatcacattaatcaaattggt
tacagagtgttagaaagaattggggccagagctctggttgcacatgtcaggacatttgcc
gatttcttggtgtatgaattttctacatctgcaggaggacagcagctcaataaatgtatt
gagattctcaatgacatggtgtggaaatacaatattgtaacgctggataggttgatactc
tgtttggctatgcgtagtcatgaaggaaacgaagctcaagtttgttacttcataatccaa
ttactcttactgaagcctaatgatttcagaaacagagtgagtgattttgtgaaggagaat
tctcccgaacactggctgcagaatgactggcatacaaagcatatgagttaccacaagaaa
taccctgaaaagctgtattttgaaggtttggcagagcaagtaaatcccccagttcagatc
cagcctcagtacttaccaatttattttggaaatgtatgcctgcgctttctgccagtgttt
gacatagtaattcatagatttctggaattgcttccagtgtccaaatcactagaaactttg
ttggatcatctgggaggtttatacaaattccatgaccgaccagtgacctacctgtacaac
actcttcattattatgaggggcatctgagagagcgcacaaacctcaagagaaaactcgtt
catgccataattggctctctcaaagataatcgtccactaggctggtgtctgagtgatact
tacctcaaatgtgccatgaatccccgagaagagaatccatgggttcctgatgatgcttac
tattgcaagctcattggaagactagtagacactatggcaggcaaatcacctggtccattt
ccaaattgtgactggagattcaatgagtttcctaacccagctgcccatgctttgcacgtt
acctgtgttgagctcatggctctggctgttccagggaaggaggtgggcaatgctctgctg
aatgttgtgctgaagagtcagcccctggttccaagagagaacatcacagcttggatgaat
gcaattggactgattatcacagccttaccagagccctactggattgttctccatgattgc
attgtgaatgtcatcaacagtcccagcttgacatcggagacagagtgggttggttaccca
ttccagctgtttgacttcacagcatgtcaccagtcttactccgagatgagttgtagctac
actttggctttggcacatgcagtctggcatcattccagcattggacagctttctctcatt
cctaaattcctcacggaagcgttgatacccattgtgaaaacagagttccagttgctctac
gtttaccacctcgttggtcctttcctgcagcggttccaacaggagaggacacggtgcatg
atagagattggagtggcattttatgaaatgctcctgaatgcagaccggtacagctcccac
ctgaactacatggatcccatttgtgatttcttgtatcatatgaaatatatgtttacaggt
gacagcgtgaaagaccaagtagagaagataatttgtaatctaaggccggctttgaaactt
cggctgcgcttcataacacacatcagcaagatggagccagctgctgtttcacagcagcct
ctcagcaatgggtccccagcacagcagcccagccaagtgcccgtcaacgtggctttgcca
gtaacgcagtga
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