Hirundo rustica (Barn swallow): 120749968
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Entry
120749968 CDS
T09369
Symbol
GJA1
Name
(RefSeq) gap junction alpha-1 protein
KO
K07372
gap junction alpha-1 protein
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
120749968 (GJA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrt02000
]
120749968 (GJA1)
Transporters [BR:
hrt02000
]
Other transporters
Pores ion channels [TC:
1
]
120749968 (GJA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Connexin
Connexin43
Connexin40_C
DUF4153
TEX29
Motif
Other DBs
NCBI-GeneID:
120749968
NCBI-ProteinID:
XP_039913977
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All DBs
Position
3:complement(65073654..65083095)
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AA seq
381 aa
AA seq
DB search
MGDWSALGKLLDKVQAYSTAGGKVWLSVLFIFRILLLGTAVESAWGDEQSAFRCNTQQPG
CENVCYDKSFPISHVRFWVLQIIFVSVPTLLYLAHVFYVMRKEEKLNKREEELKVVANDG
VNVDMHLKQIEIKKFKYGIEEHGKVKMRGGLLRTYIISILFKSVFEVAFLLIQWYIYGFS
LNAIYTCERDPCPHRVDCFLSRPTEKTIFILFMLVVSLVSLALNIIELFYVFFKGVKDRV
KGKTDPYSHSGAMSPSKDCGSPKYAYYNGCSSPTAPLSPMSPPGYKLVTGDRNNSSCRNY
NKQASEQNWANYSAEQNRMGQAGSTISNSHAQPFDFSDEHQNTKKLASGHELQPLTIVDQ
RPPSRASSRASSRPRPDDLEI
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattggagtgccttgggaaaacttcttgacaaagttcaagcctattctactgca
ggagggaaagtgtggctgtctgtcctcttcattttccgaatcttgctgttgggaacagca
gtcgaatctgcctggggagatgaacagtctgcatttcggtgtaacactcaacagcctggt
tgtgagaatgtctgctatgacaagtcctttcccatctcccatgtacgcttttgggttcta
cagatcatatttgtgtctgtacctacccttttgtacctcgcacatgtgttctacgtaatg
aggaaagaagagaagctgaacaaaagagaagaagagcttaaggtagtcgcaaatgatggt
gtgaatgtggatatgcatctcaagcaaatagaaattaagaaatttaagtatgggattgaa
gagcatggcaaagtgaagatgcgtgggggactgctccgtacttatatcatcagcatcctg
tttaaatctgtcttcgaggtggctttcttgctgatacagtggtacatttatgggtttagc
ctgaatgccatctacacctgtgagcgtgacccatgcccacacagagtggactgtttcctc
tcccgtccaactgagaaaaccatcttcatcctcttcatgctggtggtgtccttggtgtct
cttgccttgaacatcattgagcttttttacgtgttcttcaagggtgtcaaggatcgtgtg
aaagggaaaaccgacccctactcccacagcggtgccatgagcccttccaaggactgtggc
tcccccaaatatgcttattacaatggctgctcgtcccctaccgcccccttgtctcccatg
tctcccccagggtacaagcttgttactggagacaggaacaattcctcctgtcgtaactac
aataagcaagccagcgaacaaaactgggccaactacagtgcagagcagaacagaatgggg
caggctggcagcaccatctccaactcgcacgcccagcccttcgacttctccgatgagcac
cagaacacgaaaaagctggcatcaggacatgagctgcagcccctcaccattgtggaccag
aggcctcccagcagagccagcagccgggccagcagcaggcctcgacctgatgacctggag
atctaa
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