Hirundo rustica (Barn swallow): 120750003
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Entry
120750003 CDS
T09369
Symbol
ABCB1
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120750003 (ABCB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrt02000
]
120750003 (ABCB1)
04147 Exosome [BR:
hrt04147
]
120750003 (ABCB1)
04090 CD molecules [BR:
hrt04090
]
120750003 (ABCB1)
Enzymes [BR:
hrt01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120750003 (ABCB1)
Transporters [BR:
hrt02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120750003 (ABCB1)
Exosome [BR:
hrt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120750003 (ABCB1)
CD molecules [BR:
hrt04090
]
Proteins
120750003 (ABCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_22
Zeta_toxin
Rad17
RsgA_GTPase
AAA_5
AAA_15
G-alpha
AAA_28
AAA_30
AAA_29
AAA_14
AAA_19
nSTAND1
DUF815
NTPase_1
Motif
Other DBs
NCBI-GeneID:
120750003
NCBI-ProteinID:
XP_039914050
LinkDB
All DBs
Position
1:134829004..134880434
Genome browser
AA seq
1294 aa
AA seq
DB search
MDFCKETIFNKFKMNSEDEKKYTADGNHHEIAASSQGHESEDKHREKKKQKKGEKPKMVS
PFTLFRYSSWSDKLLMILGTLLAVAHGSSLPFAMIIFGDMTDSFVASGDKNFSVNFTEGM
LHKLEEDMTRYAYYYSGIAAGVLLAAYIQTSFWTLAAGRQIKKIREKFFHAIMRQEIGWF
DVNDVGELNTRLLDDVSKINDGIGDKIGLLVQALTTFVTGFIVGLIRGWKLTLVILAVSP
VLGLSAALWAKVLSAFTDKEQAAYAKAGAVAEEVLAAVRTVIAFGGQEKEIKRYHQNLED
AKRIGIRKAITANISMGAAFLLIYASYALAFWYGTTLILSDEYTIGKVLTVFFSVLIGAF
SIGQTAPSIEAFASARGAAYTVFNIIDNEPQIDSYSETGYKPDHIKGNLEFKNVYFNYPS
RPDVEILKGLNLKINSGQTVALVGGSGCGKSTTVQLIQRFYDPKEGMVTIDGEDIRTLNV
RYLREVIGVVNQEPVLFATTIAENIRYGREDVTMEEIEKATKEANAYDFIMKLPNKFETV
VGERGAQLSGGQKQRIAIARALVRNPKILLLDEATSALDTESESIVQAALDKAREGRTTV
VVAHRLSTVRNADMIAVFEGGVIKEQGNHVKLLERKGIYHKLVNMQAIEAEVPSSENYEN
ARSVKNSEYEPEPEESLTKGLRRRSTRRSMKKPGEQNESLDEEKTSPAEELPPVSFLKIM
KLNKTEWPYFVAGTLCAIINGALQPSFSVIFSEIIGIFSETDKDILRKKSNLYSLLFLGL
GIISFFTFFLQGFTFGKAGEILTMRLRFMAFKAMLRQDMGWFDNPKNSTGALTTRLANDA
SQVKGATGVRLALIAQNIANLGTGIIISLVYGWKLTLLLLAVVPIIAVAGMIEMKMLAGH
AKKDKRELETAGKIATEAIENIRTVVSLTRERKFESMYGEHLIVPYRNSVKKAHIFGFCF
ALSQAMMFFTYAGCFRFGAYLVVHDHMNYKHVFLVFSAVVFGAMALGQTSSFAPDYAKAK
ISAAHLFMLFERVPSIDSYSEEGDKPETFEGNITIKDVAFNYPNRPEVKILQGLNLKVEK
GQTLALVGSSGCGKSTVVQLLERFYDPLDGEMLFDGKNAKALNIQWLRAQIGIVSQEPIL
FDFTIAENIAYGDNSRQVSFEEIVSAAKEANIHSFIDSLPDKYNTRVGDKGTQLSGGQKQ
RIAIARALVRKPQILLLDEATSALDTESEKIVQEALDKAREGRTCIVIAHRLSTIQNADK
IAVVQNGRVIEQGTHQQLLAEKGIYYSLVNVQSG
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggatttctgcaaggagacaatcttcaataaatttaaaatgaattctgaagatgaaaag
aaatatactgcagatggaaatcatcatgagattgctgcatccagccagggtcatgaatct
gaagacaaacacagggaaaagaagaagcagaagaaaggggaaaaacctaagatggtcagc
ccatttacactgtttcgatactccagctggtcagataaattattaatgatactaggcact
ctgctggcagtagcccatggaagcagtctcccttttgcgatgataatttttggtgatatg
actgatagttttgttgcttctggagacaaaaatttttcagtgaatttcactgaaggtatg
cttcacaagctggaagaagatatgacaagatatgcatactactattctggaatagcagct
ggtgttcttcttgctgcttatattcagacttcgttctggaccttagcagctggtcggcaa
ataaaaaaaattagagaaaaattttttcatgcaattatgagacaggaaattggatggttt
gatgtaaatgatgtgggagaacttaacactcgtcttctagatgatgtctccaagattaat
gatggaataggtgacaagattggattgcttgttcaggcactaacaacatttgtgacagga
tttattgttggtctcataagaggatggaaattaaccctggtaatactagcagttagtcct
gtcctgggactttcagcagccctctgggcaaaggttctctctgctttcactgacaaagaa
caagctgcatatgcaaaagcaggtgctgttgcagaagaagttctggcagcagtccgtact
gtaatagcttttggaggacaggagaaagaaattaaaagataccatcaaaatttagaagat
gctaaacggattggaataagaaaggctattacagctaatatttccatgggtgctgctttc
ttactgatatatgcatcgtatgcactagcattctggtatggaactactttgatcttaagt
gatgagtacactattggcaaagtccttacagtctttttctctgtattgattggagctttc
agtattggacagactgctccaagcatagaggcattcgctagtgcaagaggagctgcctat
acggtctttaatataatagacaatgaacctcaaattgacagctattcagagacaggttac
aaaccagaccacataaaagggaacttggaattcaaaaatgtttacttcaattatccatcc
agaccagatgttgagatactgaagggcttgaatctcaagattaattctggccagacagtg
gccctggttggtggcagtggctgtgggaaaagtacaactgttcagctcatccagagattt
tatgatcccaaggaaggcatggttaccattgatggggaggatattaggaccttgaacgta
aggtatctgcgggaggttattggtgtggtgaatcaagagcccgtgctctttgccactacc
attgcagaaaacattcgttacggccgtgaggatgtcaccatggaggagattgaaaaagcc
accaaggaagcaaatgcttatgacttcatcatgaagctacccaacaagtttgaaactgtg
gttggagaaagaggggcacagctcagtggaggccagaagcaaagaatagcaattgcccga
gcgctggttcgcaatcctaaaattcttctgcttgatgaggcaacatcagctttggatact
gagagtgaatcaattgtgcaggcagcactggacaaggcaagggaaggacgcaccacagtt
gtggtagctcatcgactatcaacagtccgaaatgcagatatgatagctgtgtttgaaggt
ggagtcatcaaagagcaagggaatcatgttaaattgcttgagagaaagggaatctaccac
aaacttgttaacatgcaggcaatagaagctgaagtcccatcatcagaaaattacgagaat
gcacgtagtgtcaaaaacagtgaatatgagccagaacctgaagaatccttaactaaagga
ttgagaagacgatcaactcggagaagcatgaaaaagccaggagagcaaaatgagagcctt
gatgaggaaaaaacatcacctgcagaagaactacctccagtttcatttctgaaaattatg
aagttgaacaaaactgaatggccatactttgtagctggaaccttgtgtgcaattatcaat
ggagctttacaaccttcattttcagtcatattttctgaaattatagggattttttcagag
actgacaaggacatcttaagaaaaaagagcaacttatattcactgctgtttttaggactt
gggataatttccttttttactttctttttacagggtttcacatttggcaaagctggagaa
attcttacaatgaggcttcgattcatggcatttaaagcaatgcttaggcaggatatgggc
tggtttgataatcctaaaaatagcactggagcattaactacaagacttgctaatgatgcc
tctcaagtgaaaggagcaactggtgtcagactagcattaatagcccaaaacatagccaac
ctggggactggaattattatatcattagtttatggctggaagctgaccctgctactttta
gctgttgtgcccatcattgcagtggcaggaatgattgaaatgaagatgttggctgggcat
gctaagaaagataaacgagagctggaaactgcaggaaagattgccacagaagcaatagaa
aatattagaactgttgttagcttgacccgagaaagaaaatttgagtcaatgtatggagaa
catctgattgtaccatacagaaattctgtgaagaaggcacatatatttggcttttgtttt
gccctttcacaagcaatgatgttctttacttatgctggctgtttccggtttggtgcctat
ctagtggtacatgatcacatgaactataaacatgtatttttagtgttttcagctgttgta
tttggtgcaatggcactaggacaaaccagttcttttgctccagactacgccaaagccaag
atatcagcagcccacttgtttatgctgtttgaaagagtgccctcaatagatagttacagt
gaggaaggagacaagcctgaaacatttgagggaaacataacaatcaaagatgtggcattt
aactacccaaaccgaccagaggtcaaaattctccaaggtttgaatctaaaagtagaaaag
ggacaaactctggctcttgttggcagcagtggctgtggaaagagcaccgttgttcagctg
ctggagagattttatgacccacttgatggggaaatgctttttgatggcaaaaatgcaaag
gcactgaatatccagtggttgagagctcagattggtatcgtctcacaagaaccgatcctg
tttgacttcactattgctgaaaacatcgcttacggagataacagtcggcaggtgtccttt
gaggaaattgttagtgcagcaaaagaagccaatattcattctttcattgactcactgcca
gacaaatacaatacccgtgtaggagacaagggaacccagctttccggtggccagaaacag
cgtatcgctattgcccgagctcttgtacgtaagccccaaattctgcttctggatgaagct
acttctgccttggacacagaaagtgaaaagattgtccaggaagcgctggataaagctcga
gaaggtcgcacgtgcatcgtgatagctcaccgcctctccaccatccaaaatgctgacaag
atcgccgtggtccagaatggcagggtcatagagcagggcacccatcagcagcttctggct
gaaaaaggcatctactattccctggtcaatgttcaaagtgggtga
DBGET
integrated database retrieval system
