Hirundo rustica (Barn swallow): 120750120
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Entry
120750120 CDS
T09369
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
120750120 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120750120 (ARID1B)
03021 Transcription machinery [BR:
hrt03021
]
120750120 (ARID1B)
03036 Chromosome and associated proteins [BR:
hrt03036
]
120750120 (ARID1B)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Helix-turn-helix
ARID
120750120 (ARID1B)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
120750120 (ARID1B)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
120750120 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
120750120
NCBI-ProteinID:
XP_039914273
LinkDB
All DBs
Position
3:complement(54799938..55124951)
Genome browser
AA seq
2373 aa
AA seq
DB search
MIMAAQVAAAPASANSKGKAPSLPGGLGPERGPGGAGAPGPGPALGVGEGSPAGGSSVNN
LDHHLHHHHHRSEPPNMANNAAPAAAAGNNNNASGGGGSSSEPAVKEGGSSSELSSSSSS
SSSSSSSSSNPGSAMETGLLPNHKLKSVGGDHPAAPPHHHHAHHPHHHAHHHHAHHPHHH
HHALQQQLNQFPPPPPQQPPPQHHPVQNNNSSLGGGGGGGSGSNNNGGGGGGAAQPSADM
EQQQHGGKDSVLGAQAEPPQQPQQMLNKGADEEEMPGKMGEPIGGRYDHPGLGPLGGQQQ
PQQPPPSAGSGGGGGLGGGGGSGGGGGGPSAVGVSEFNSYYGNPAPAPASSATASRAGPC
FDQHGGQQSPGMGIMHPTAAPNSMDPLQNSHEGYPNSQYNHYPGYGRGPSGGGAGGGAGA
VAAAAAAAGAGGGGYGGSAAGYGVLSSPRQPGGGMMMGPGGGAGLGKAGAGAAAAAGGFA
RFSGQNQHPSGATPTLNQLLTSPSPMMRSYGSSYPDYSSPSAPPQPQPQAAAAAPGSQQA
AAGMGMGKDMGAQYGAANPAWAAAQQRNHPAMSPGNTGQAISRTQGSPMDPMVMKRPQLY
GMGNNPHSQAQQSSPYPGQSYGPPGPQRYPVGMQGRAPAAMAGMQYPQQQIPPQYGQQGV
SGYCQQGQQPYYNQQPQPQHLPPQAQYLSQAQQRYQAQQDMSQEGYGTRSQPAMAPGKPN
HEDLNLIQQERPSSLPVEVLASEDATFGHKDLSGSIDDLPTGTEATLSSAVSASGSTSSQ
GEQSNPAQSPFSPHASPHLSGIPGGPSPSPVGSPVGSNQSRSGPISPASIPGSQMPPQPP
GSQSESSSHPALSQSPMPQDRGFMAGIQRNPQMSQYGPQQTGPSMSPHPSPGGQVHPGIG
SFQQSNSSGTYGPQMSQYGPQGNYSRPPTYSGVPNTSYSGPGPGMGINANSQMHGQGPSQ
PCGTMPLGRMPSAGMQSRPFPGNMSSMTPNSPGMSQQGGPGMGPPMPTVNRKAQEAAAAV
MQAAANSAQSRQGNFPAMNQSGIMGSSSPYTQPMNNSSGLMNPQAPPYSMAPNMVNSSTG
NAPMGLADMMTPGESKLPLPLKADGKEEGAPQPESKSKDSYSSQGISQPPTPGNLPVPSP
MSPSSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITKVYELGNEPERKMWVD
RYLTFMEERGTPVASLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATTLNVGTS
SSAASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQPKIQPPSPANSGSLQGPQT
PQSTGSNSMTEVPGDLKPPTPASTPHGQMTPMQGGRNSAVSVHDPFSDVSDSAFPKRNSM
TPNAPYQQGINMPDMMGRMPYEPNKDPFGGMRKVPGSNEPFMTPGQMPNSGIQDMYNQSP
SGAMSNMSMSQRQQFSYGSGYDRRHEPYGQQYPGQGPPSGQPPYGGHQPGMYPQQQNYKR
HMDGMYGPPAKRHEGDMYNMQYGNQQQEMYNQYGNAYTGPDRRPMQGQYPYPYNRERMQG
PGQMQQHGIPPQMIGGPMQSSSSSEGPQQNMWPTRNDMPYPYQNRQGPGGPAQAPPYPGM
NRTDDMMVPDQRINHESQWPSHVNQRQPSYMSSSASMQPITRPPQSSYQTPPSMPNHISR
APSPASFQRSLENRMSPSKSPFLPSMKMQKVIPTVPVSQVTGPPPQPPPIRREITFPPGS
VEASQPVLKPRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFN
LSQLSGFLELLVEYFRKCLIDIFGILMEYEVGDPGHKALDHKAAKKDDSQSLAEDTGKDE
NDECIDYFDEDEEEGEDEKVEGEEKSIVFSTPGAIADPSERPKQASKFDKLPIKIVKKNN
LFVVDRSDKLGRVQEFDSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRKAPPPLNSPSKK
KDLEGKSESEEQQEKSITATIDDVLSARPGALPEDSNSGSQTESSKFPFGIHQAKSHRNI
KLLEDEPRSRDETPLCTITHWQDSLAKRCICVSNIVRSLSFVPGNDTEMSKHPGLVLILG
KLILLHHEHPERKRAPQTYEKEEEEDKGVACSKDEWWWDCLEVLRDNTLVTLANISGQLD
LSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNV
DLILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNLAQGDTLAARAIAVQKGSI
GNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFL
LHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
7122 nt
NT seq
+upstream
nt +downstream
nt
atgatcatggccgcgcaagtcgcagcggctccggcgagtgcaaacagcaagggcaaagcc
ccgagcctgccgggcggcctgggcccagagcgaggcccggggggggccggggctcccggg
ccgggccccgcgctgggggtcggcgaggggagtccggccggcggcagcagcgtgaataat
ttagatcaccatctccaccaccaccaccaccgcagcgagccgccgaacatggccaataac
gcggctcccgccgctgccgccggtaacaacaacaacgccagcggcggcggcggctcctcc
tcggagccggctgtgaaggaaggtggaagctcctcggagttatcttcatcttcttcgtct
tcttcctcctcctcctcctcctcctccaacccgggctcggctatggagacggggctgctc
cccaaccacaagctgaagagcgtcggaggcgatcaccccgccgcgccgccccaccaccac
catgcccaccacccgcatcaccatgcccaccaccaccatgcccaccacccgcaccaccac
caccatgcactacagcagcagctaaatcaattcccgccgccgccgccgcagcagccgccg
cctcagcaccatcccgtgcagaataacaacagcagcctcggcggcggcggcggcggcggc
agcggcagcaacaacaacggcggtggcggtggcggcgctgctcagcccagtgcagacatg
gagcagcagcaacatggaggaaaagacagtgttttgggcgctcaggccgagcccccccag
cagccgcagcaaatgctgaataaaggcgccgacgaggaggagatgcccggcaagatgggc
gagcccatcggcggccgctacgaccaccccggcttgggacccctgggcggacagcagcag
cctcagcagccgcccccgagcgctgggagcggcggcggcggcggcctcggcggcggcggc
gggagcgggggaggcggcggcggcccctccgcggtgggtgtctcggagttcaatagctat
tatggcaaccctgcccctgcccctgccagcagcgctacggcgagccgcgccgggccttgc
tttgatcaacatggcggacaacaaagccccgggatggggataatgcaccccacggcggcc
cccaacagcatggaccccctgcagaactcccacgaagggtaccccaacagccagtacaac
cactacccgggctacggccgcggccccagcggcggcggcgcgggcggcggcgcgggagcc
gtggcggcggcggcggcggccgccggggcaggcggcggcggctacgggggctccgcggcg
ggctacggggtgctgagctccccgaggcagcccggcggcggcatgatgatgggccccggc
ggcggagccggcctcggcaaggctggtgccggcgcggcggcggcggccggcggctttgcg
cggttctccgggcagaaccagcacccgtccggggccacccctaccttgaaccagctgctc
acgtcccccagccccatgatgcggagctacggcagcagctaccccgactacagcagcccc
agcgccccgccgcagccccagccccaggcagcggcggccgccccgggaagccagcaggca
gcggcgggcatgggcatgggcaaggacatgggcgcccagtacggagcggcgaacccggcc
tgggcagcggcacaacaaaggaaccacccggcgatgagccccgggaacaccgggcaggcc
atcagcaggacccagggcagtccgatggatccgatggtgatgaagaggccgcagctgtac
ggcatgggcaataaccctcactctcaggcgcagcagagcagcccctaccccgggcagtcc
tacggccctcccggcccccagcgctatcccgtgggaatgcagggccgagccccggcagcc
atggcaggaatgcagtatccacagcaacagatcccacctcagtacggtcagcaaggtgta
agtggctactgccagcagggccagcagccgtactacaaccagcagccgcagccgcagcac
ctgccgccccaggcgcagtacctgtcgcaggcccagcagaggtaccaggctcagcaggac
atgtctcaggaaggctatggaaccagatctcaacccgctatggccccaggaaagcctaac
catgaagacttgaatctaatccagcaagaaagaccatcaagcttaccagttgaagtcttg
gcctccgaggatgctacatttggacacaaggatttatctggatccattgacgacttgccg
actggaactgaagcaaccctcagctcagccgttagcgcatcaggctctacgagcagccaa
ggggagcagagcaaccctgcacagtctccgttttcccctcatgcttctccacatctctct
ggcatccctgggggcccatcaccttcccctgtaggctcacctgttggaagcaaccagtca
agatctggtcccatttctccagcgagtattccaggcagtcagatgccaccgcagcctcct
ggcagccagtcagaatccagctcccaccctgccttgagccagtcaccaatgccacaggac
cgaggttttatggcaggcatacagaggaacccccaaatgtcacagtatggacctcaacaa
actggaccttccatgtcaccacacccctcacctggaggtcaggtgcatcctggaattggt
agctttcagcagagtaattcaagtggtacttatgggcctcagatgagccagtatggacca
caaggaaactactccagaccaccgacgtacagcggtgtgcccaacacgagttacagtggc
ccaggacccggcatgggtataaatgccaacagtcagatgcacggacaggggccgagccag
ccttgtggtaccatgcccctgggacggatgccatcagctgggatgcagagcagaccattt
cctggaaacatgagcagtatgacccccaattctcctggcatgtctcagcagggaggccct
gggatgggcccacccatgccaactgtgaaccgtaaggcgcaggaggcggctgctgcagtg
atgcaggctgctgcaaactccgctcagagcaggcaaggcaattttcctgccatgaatcag
agcggcattatgggatccagctccccctacactcagccgatgaacaacagctccggcctg
atgaacccgcaggctcctccttacagcatggcgcccaacatggtgaacagctcaacaggt
aatgcacctatgggtcttgcagatatgatgacacctggtgagtccaaacttccccttcct
ctcaaagcagatggcaaagaagaaggagccccccaacccgagagcaagtcaaaggatagc
tacagctctcagggtatttctcagcccccaaccccaggcaacctgccagtcccttcccca
atgtccccaagctctgctagcatctcctcatttcatggagatgaaagtgatagcattagc
agcccaggctggccaaagactccatcaagccctaaatcaagttcctctaccacaactgga
gagaagatcactaaagtctatgagctaggaaatgagccggagcgcaagatgtgggtggat
cggtacctgacgttcatggaggagaggggcacgcctgtggccagtctgccagctgtgggc
aagaagcccctggacctgttcaggctctatgtctgcgtcaaagagattggaggtttagca
caggttaataaaaacaagaagtggcgtgagctggcaaccaccttgaacgttggcacttcg
agcagcgcagccagctccctgaaaaaacaatacattcagtacctgtttgccttcgagtgc
aagattgagcgaggggaggagccccctccagaagtcttcagcactggagataccaagaaa
caacctaagattcagccgccatctcctgctaattctggttccttgcaaggcccacagact
ccacagtccactggtagtaattccatgacagaagtgccaggcgatttgaagcccccaaca
ccagcatccacacctcatggacagatgacacctatgcagggtggcagaaacagcgcagtc
agtgtgcatgatcccttttctgatgtgagtgattcagcgttcccaaagcgaaactccatg
acgccaaatgcaccataccagcagggaataaacatgccagatatgatgggaaggatgcca
tacgagccgaataaagatcccttcggtggaatgagaaaagtgcctggaagcaatgagcct
ttcatgacccctggacaaatgcctaacagtggaatacaagatatgtataaccagagtcca
tctggagcaatgtccaacatgagcatgagccagcgacagcagttctcttacggaagtggc
tatgacaggaggcatgaaccttatgggcagcagtatccaggacaaggacctccctcagga
cagccaccatatggaggacatcaacctggaatgtatccacagcagcagaactacaagaga
cacatggatggcatgtatgggcctccagccaaacgccacgaaggggatatgtataacatg
cagtatggcaaccagcagcaggaaatgtataaccagtatggcaacgcttacacagggccg
gacaggaggcccatgcagggacagtacccgtatccatataacagggagaggatgcagggc
ccaggacaaatgcagcagcatggaatacctccccagatgattggtggccccatgcagtcg
tcgtcctccagtgaaggtcctcagcagaacatgtggccaacaagaaatgatatgccttac
ccttaccagaacaggcaaggtccaggaggccctgcacaggcccctccgtatccagggatg
aatcgcactgatgatatgatggtacctgaccagaggataaaccacgagagtcagtggcct
tctcatgtcaaccaacggcagccttcttatatgtcatcctcagcctccatgcagcctatc
actagacctcctcagtcatcctaccagacaccaccctctatgccaaaccacatctccaga
gctccaagtccagcgtccttccagcgctctttggaaaaccgtatgtctccaagcaagtct
cctttcctaccctccatgaagatgcaaaaggttatacccacagttccagtgtcacaggtc
acaggacctccaccccagccaccaccgattaggcgagagattaccttccccccaggctct
gtagaagcatcccaaccagtcttaaaaccaagacgaaagattacctcaaaagatattgta
actcctgaggcctggagagtgatgatgtctcttaaatctggtcttttggctgaaagtacc
tgggcgctagacactattaatattcttctgtatgatgacagcactgttgctactttcaac
ctctctcagttgtctggatttcttgagcttttagtagaatattttagaaaatgcctgatt
gacatttttggaatccttatggaatatgaagtgggagatccaggccacaaagcacttgat
cacaaagcagccaagaaagatgatagtcagtccttggcagaggatactggaaaagatgag
aatgacgaatgtattgactattttgatgaagatgaggaggagggggaagatgaaaaggta
gaaggagaagaaaagagcattgttttttccactcctggtgccattgctgatccaagtgag
aggccaaaacaagccagtaaatttgacaagctgccaataaagattgtaaagaaaaataat
ctgtttgttgttgaccgatctgacaaacttggacgcgttcaggaatttgatagtggactt
ctccactggcagcttggtggtggtgacacaactgagcatatccagactcactttgagagc
aagatggagattccaccacgcaggaaagcccctcctcccttgaactctccaagcaaaaag
aaagacctcgaggggaaaagtgaatctgaggagcaacaagaaaagagtataacagcaacc
attgatgatgtcctctcagctcggccaggagcattacctgaagactcaaactctggttcc
caaacagagagcagtaaatttcccttcgggatccatcaagccaaaagccaccggaatatt
aaactgctagaggacgagccaaggagccgggatgagactcctctatgcaccataactcac
tggcaagactccttggccaaacgctgcatctgtgtgtcaaatatcgtccgtagcttgtct
tttgtgcctggcaatgacaccgaaatgtccaaacatccaggcttggtgctgatcctggga
aagttgatccttcttcaccacgagcatccagaaagaaagcgagcgccgcagacttacgag
aaagaggaagaggaggacaaaggggtggcctgcagcaaggatgagtggtggtgggactgc
ctcgaggtcttgagggataatacattggtcacattagccaacatttctgggcagctagac
ttgtctgcttacacagaaagcatctgtttgccaattttggatggcttgctgcactggatg
gtgtgcccgtctgcagaggcacaggatccttttccaaccgtggggcccaactcagttctt
tcgcctcagagacttgtgctggagaccctgtgtaagctcagtatccaggacaataatgtg
gaccttatcttggccacccccccattcagccgtcaggagaaactctacgctactttagtt
aggtacgttggggaccgcaaaaacccggtctgccgagaaatgtccatggcgctcctatcg
aaccttgcccagggggacacattagcagcaagggcaatagctgtgcagaagggaagcatt
ggaaacttgataagcttcctggaggatggggtcactatggcccagtaccagcagagccag
cataacctcatgcacatgcagcctccgcctctggagccgcctagcgtagacatgatgtgc
agggcagccaaggccttgctggccatggcgagagtggacgagaaccgctccgagttcctt
ttgcacgagggtcgtttgctggatatctcaatatctgctgtcctgaactctctggttgca
tctgtcatctgtgatgtactttttcagattgggcagttatga
DBGET
integrated database retrieval system
