Hirundo rustica (Barn swallow): 120750274
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Entry
120750274 CDS
T09369
Symbol
SMOC2
Name
(RefSeq) SPARC-related modular calcium-binding protein 2 isoform X1
KO
K24354
SPARC-related modular calcium-binding protein
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hrt00536
]
120750274 (SMOC2)
Glycosaminoglycan binding proteins [BR:
hrt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
120750274 (SMOC2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Thyroglobulin_1
Thyroglob_assoc
SPARC_Ca_bdg
Kazal_2
EF-hand_7
EF-hand_6
EF-hand_5
CFAI_KAZAL
Motif
Other DBs
NCBI-GeneID:
120750274
NCBI-ProteinID:
XP_039914663
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All DBs
Position
3:41819147..42014200
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AA seq
464 aa
AA seq
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MWVPLLLLLPELLPAVPAQKLSALTFLRVDQDKDRECSLDCAGSPQKSLCASDGRTFLSR
CEFQRAKCKDPQLEIAYRGNCKDVSRCVAERKYTQEQARKEFQQVFIPECNDDGTYSQVQ
CHSYTGYCWCVTPNGRPISGTAVAHKTPRCPGSVSEKLPQREGAGKTVSLQIFSILNSDD
ASAPALETQPQGDEEDIASRYPTLWTEQVKSRQNKTNKSSASSCDQELQSALEEAKQPQK
DNVFIPECAQGGLYKPVQCHPSTGYCWCVLVDTGRPIPGTSTRYEQPKCDNGARAHPTKT
KDLYKGRQLQGCPGAKKNEFLTSVLDALSTDMVHAVSDPSLSSSRVSEPDPNHTLEERVV
HWYFKQLDKNSSGDIGKKEIKPFKRFLRKKSKPKKCVKKFVEYCDVNNDKSLSVQELMGC
LGVTKEEGKAETKKRHTVPRTNTESTSSSRQVQPEYLSALAVNL
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgtgggtgccgctgctgctgctgctgccggagctgctccccgccgtgccggcacagaag
ctctccgccctcacgtttttgagagtggaccaagacaaagacagagaatgcagcctggac
tgtgcaggttcccctcagaaatcactctgtgcatctgatggaagaacttttctgtcgcgg
tgtgagtttcaacgagcaaaatgcaaagaccctcagctggaaatagcctaccgaggcaac
tgcaaagatgtttccagatgtgtggctgagaggaagtacacccaagagcaagctcgcaaa
gaatttcagcaagtgtttatcccagaatgcaatgatgacggcacatacagtcaggttcag
tgccacagttacactggatactgctggtgtgtcactcccaatggccgtcctatcagtggt
actgctgtggcccacaaaactccccgctgcccaggttcagtgagtgagaagctgccacaa
cgagaaggtgcaggcaaaacagtctccttgcaaatcttttccattctgaattcagatgat
gcctcagctcccgcgctggagactcagcctcaaggtgatgaggaagatatagcttctcgt
tatcctactttatggactgagcaagtaaagagcagacagaacaaaaccaataaaagctca
gcatcgtcatgtgatcaagaactccagtcagccctggaggaggcaaaacagccccagaaa
gacaatgtgttcattccagagtgtgctcagggcggcctctacaaaccggtgcagtgccat
ccttccacgggctactgctggtgtgttctggtggatacgggacgtcccatccccggtaca
tcaacaaggtatgaacaacctaaatgtgataatggtgccagagctcatccaacaaaaaca
aaggatttgtacaaaggacgtcagcttcaaggttgtcctggggccaagaagaatgagttc
ctgacgagtgttttggatgcattgtccacagatatggtgcacgcggtctctgatccatca
ttgtcctccagccgtgtttctgagcctgatccaaatcatactctggaagagagagtcgtc
cattggtatttcaagcagctagataaaaattccagtggtgatattggcaagaaggaaatc
aagccatttaaacgattcctaagaaagaaatcgaagcccaaaaaatgtgtgaagaagttt
gtggaatactgtgatgtgaacaacgataagtccttgtcagttcaagaattaatgggctgc
ttgggagtaacaaaagaagaaggtaaagcagaaacaaagaaacgccatacggtccctaga
accaacactgagagcacttcatccagcaggcaggttcaaccagaatatttatctgcactt
gcagtgaatctctga
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