Hirundo rustica (Barn swallow): 120750424
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Entry
120750424 CDS
T09369
Symbol
SEC23B
Name
(RefSeq) protein transport protein Sec23B isoform X1
KO
K14006
protein transport protein SEC23
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120750424 (SEC23B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120750424 (SEC23B)
Membrane trafficking [BR:
hrt04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
120750424 (SEC23B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
Gelsolin
zf-Sec23_Sec24
APP_E2
Motif
Other DBs
NCBI-GeneID:
120750424
NCBI-ProteinID:
XP_039915056
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Position
3:13600757..13615365
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AA seq
781 aa
AA seq
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MSPEGVLIMGFCSAMATYLEFIQQNEERDGVRFSWNVWPSSRLEATRMVVPLACLLTPLK
ERLDLPPVQYEPVLCSRPTCKAVLNPLCQVDYRAKLWACNFCFQRNQFPPAYAGISEVNQ
PAELMPQFSTIEYIVQRGPQTPLVFLYVVDMCLEEEDLQALKESLQMSLSLLPPDALVGL
ITFGRMVQVHELSCEGISKSYVFRGTKDLTAKQIQDMLGLSRPAVPMQHGRPLQTPEQPV
ISSRFLQPVHKIDMNLTDLLGELQRDPWPVTQGRRPLRSTGVALSIAVGLLEGTFPNTGA
RIMLFTGGPPTQGPGMVVGDELKTPIRSWHDIEKDNARFMKKATKHYETLANRSAANGHC
IDIYACALDQTGLLEMKCCANVTGGHMVMGDSFNTSLFKQTFQRVFSKGYSGEFRMAFGA
NLDVKTSRELKIAGAIGPCTSLNAKGPCVSENEIGIGGTSQWKICSLDPSTTLAIYFEVV
NQHNAPIPQGGRGAVQFVTQYQHSSTQRRIRVTTIARNWADAQTQLQHIEAAFDQEAAAV
LMARLGVYRAESEEGPDVLRWLDRQLIRLCQKFGQYNKDDPNSFRLSESFSLYPQFIFHL
RRSPFLQVFNNSPDESSYYRHHFARQDLTQSLIMIQPILYAYSFHGPPEPVLLDSSSILP
DKILLMDTFFQIVIYLGETIAQWQKAGYQDMPEYENFKHLLQAPLDDAQEILQTRFPMPR
YIHTEHGGSQARFLLSKVNPSQTHNNLYAWGQESGAPILTDDVSLQVFMDHLKKLAVTSA
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgtcccctgaaggggtattgatcatgggcttctgcagtgccatggcgacgtatctggag
ttcatccagcagaatgaggagcgtgatggagtgcgcttcagctggaacgtgtggccctcc
agcaggctcgaggccacaaggatggttgtgcccttggcctgtctcctgaccccgctgaag
gagcgtctagacctgccccctgttcagtacgaaccagtgctttgcagcaggccaacctgc
aaagctgtgctcaacccactctgccaggttgactatcgggccaagctttgggcttgtaac
ttctgttttcagagaaaccagttcccccccgcatatgcaggcatttctgaagtcaatcag
ccagcagaacttatgcctcaattttcaacaattgaatatatagtgcagcgaggtccacag
acgccgttggtcttcctgtatgttgtggacatgtgcttggaagaggaggatttgcaggcc
ctgaaggagtccctgcagatgtccctgagcctgctgcctcctgatgccttagtagggctc
atcactttcggccggatggtccaggttcatgagctgagctgtgaaggaatttccaagagc
tatgtattccggggcaccaaggatctgacagccaagcaaatacaggatatgcttgggctt
tcaaggccagctgtccccatgcaacatggaagacctcttcaaactccagagcagcctgtt
atttccagcaggttcctacagcccgtgcataagattgacatgaatttaacagatctgctt
ggagagctgcaaagggacccatggccagtgacccagggaaggagacccttacgttctact
ggagtggctctttcaattgcagttggcttattggagggtacatttccaaacacaggggcc
agaataatgctgttcacaggcgggccaccaacacaagggccaggcatggtggtgggagat
gaactgaaaacacccatccgttcgtggcatgacatagagaaggataatgcaaggttcatg
aagaaggccaccaaacactacgagactctggccaaccgctctgcagccaatgggcattgc
atcgacatctatgcctgtgccctggaccagacagggctgctggagatgaagtgctgtgca
aatgtcactggaggacacatggtgatgggagactccttcaacacttctctcttcaagcag
accttccagcgggtatttagcaaaggctacagtggggaatttcggatggcttttggtgca
aatctggatgtgaagacctccagggagctgaaaattgcaggagccattggaccatgtaca
tccctgaatgctaaagggccatgtgtctctgaaaatgaaattggaattggagggacatct
caatggaaaatctgtagtctggatcccagtacaactctggccatttactttgaagtggta
aatcagcacaatgcacccatccctcagggaggcagaggggcagtgcagtttgtcactcag
tatcaacactccagcacccagaggcgcattcgtgtcaccaccatagccagaaactgggca
gatgcacagactcagctccagcacatcgaggctgcgtttgaccaggaggcagctgctgtg
ctcatggcacggctgggagtgtacagggctgagtctgaggagggacctgatgttctgcgt
tggctggacaggcagctcatcaggctgtgtcagaaatttggacaatacaacaaagatgac
cccaactcttttaggctgtcagaatcattttctttgtatcctcagttcatcttccacctg
cgacgctccccattcctgcaggtcttcaataacagtccagatgaatcttcctattaccgg
caccactttgccaggcaggatctgacccagtccctcattatgatccagcccatcctttat
gcttattctttccatgggcctcctgagccagtgcttttggacagcagcagtattcttcct
gacaaaatcctgctgatggatactttcttccagatagtcatctaccttggtgagactatt
gcacagtggcagaaagctggataccaagacatgcctgaatatgaaaactttaagcacctc
ctgcaagccccactggatgatgcccaggaaatcttgcagaccagattcccaatgccacgg
tacatccacactgagcatgggggcagtcaggcccggttcctcttgtctaaagtgaatcct
tctcagactcacaataacctctatgcctggggccaggaatcgggagctccaatcctgaca
gatgatgtgagtctccaggtattcatggaccaccttaaaaagctggcagttacaagtgca
tcgtga
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