Hirundo rustica (Barn swallow): 120750441
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Entry
120750441 CDS
T09369
Symbol
RB1CC1
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120750441 (RB1CC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrt01009
]
120750441 (RB1CC1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120750441 (RB1CC1)
03029 Mitochondrial biogenesis [BR:
hrt03029
]
120750441 (RB1CC1)
Protein phosphatases and associated proteins [BR:
hrt01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120750441 (RB1CC1)
Membrane trafficking [BR:
hrt04131
]
Autophagy
Autophagosome formation proteins
ULK complex
120750441 (RB1CC1)
Mitochondrial biogenesis [BR:
hrt03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
120750441 (RB1CC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
Motif
Other DBs
NCBI-GeneID:
120750441
NCBI-ProteinID:
XP_039915108
LinkDB
All DBs
Position
1:40541545..40607383
Genome browser
AA seq
1598 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELAVQNVADLKHAIQTKYKIAIQHQVLVVNGGECMAPDRRVC
SYSAGTDTNPIFLFNKEMILCERPPAIPKTTFSAENEMELKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCTLSYRKLLSKFDNVYSSYLQ
SIDDIKLKLTHLGSAVSVMAKIPLLECLTRHSYRECLGRLESSPEYGGAESEETEDGKSA
ELVLYPDVPKVNSKSMLASLCKSVEHSALEGTDPENVKDDKESGQNATVQDSEMSVELKD
DDQPSFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIQPFLAECRQTIAKLDNQN
MKAIKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQKRAENLKDPSVLPDLCLSHAN
QLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCFVMLHADQDGEKLQALLRLVTE
LLERVKVVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALIKDGKHLYEAEKAKRESF
GKLFRKSFLRNRLFRGLDSWPPSFCTRKPRRFDSELPDISLSDLQFLQSFCPSEVQPLLR
VPILCDFEPLHQHVRALHNLVKAAQSLDEMSQTITDLLNEQKASNSQASPQSATTPRMES
TTGTAIATSSRTPPSLSLQGPLCPPVCPPAPLEELSPDSIDAHTFDFETIAHPNLEQALK
QGSLDLDSLAESPESDFMSAVNEFVIEENLVSPNVISDPQSPEMMVESLYSSVINAIDSR
RMQDTSSCVKDVSGENASLSVCVEKCRVIAQDSKVHLRGIKEDLCHFKTLVQREQCDFSN
SLKCTSLEIVNTIEKVKLSLEKALNDKHQNELQSLKSEYETKINKLLEDGEENKKKIKKL
KGDLLGLEEVLQNKNDEFAIVKNEKEAVVCLQNEKDQKLLELECQMETQNSEIKELRQSR
EIVLEDLKKLHVENNEKLQLLRAELESLEQSHLKELESNLQARHLQEFEKVLAEHKDCLD
KLKKENQHRLEQMQESHEVVMQEKQHQVEELQLKVSDLSDLRCKLEVELALKEAETDEMK
LLLEESRNQQQETLKSQIDKETESLRKEIDKLNNKIQISSDEYQVGLSELRTLMTIEKDQ
CISELVNRYEEESNLLRTELNKVTLLHQKTAEAEKRLSEQIRELQSKLELEMSALEKEKT
EKLSLCEQQEKYEAIIHKLKEEKELLVSNQEQDRQLLIQKLNCEKEDAVQTACKEFELQR
EAAEKGLLEKIQQLEMQVNQSPPAESSAESNLVAELQEKLQEEKMKFLEQLEEQEKRKNE
EMQNIRTSLTAEQQTNFNTVLAREKMKKENIINDLSDKLKVLTQQQEKDKDLIETLSEDR
ARLLEEKKKLEEEVNKLRSSNFSSSAYLAAASEACGACAADVPHDTDRLFADFGAEGRMD
STMETSMMAVHENVHMSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKI
AIRDFQVGDLVLIILDERHDNYVLFTVSPTLYFLHSESLAALDLKPGECASGASRRPWVL
GKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNKKV
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgaagctatatgtatttttggtcaacactggaactacccttacatttgatactgaactt
gctgtacaaaatgtggctgatctgaaacatgcaattcaaacaaagtataagatagccatt
cagcaccaagtattggttgtcaatggaggagagtgtatggcaccagacagaagagtgtgt
agttacagtgctggaacagacaccaacccaatttttttattcaacaaagaaatgatcttg
tgtgaacgtccaccagctatccccaaaaccacattttcagcagagaatgagatggaattg
aaagtagaagaatctcttatgatgcctgcagtgtttcatacagtagcatcacgaacacag
cttgctgtggaaatgtatgaggttgccaagaagctttgctcgttttgtgagggtctcgta
catgatgaacatcttcagcatcaaggttgggctgccataatggccaacttggaagattgt
acattgtcttaccgaaagctgctttccaagtttgataatgtgtattcaagctatttgcag
tccatagatgacatcaaattgaaacttacacatttgggttctgctgtttctgtcatggcc
aagataccactactggagtgcctaacaagacatagttacagagagtgtttaggaagactg
gagtcttcacctgaatatggaggagcagaaagtgaagaaactgaggatgggaaatctgct
gaattggtgctttatcctgatgtacctaaagtgaacagtaaatcaatgttagcatcattg
tgcaagtcagttgaacattcagctttggaaggcacagatcctgaaaatgtaaaagatgat
aaggaatccggtcaaaatgctactgtccaggacagtgaaatgtcagtagaattgaaagat
gatgatcagccttccttcaatgtgtctttgttagactggataaatgttcaagatagacct
aatgatgttgaatccctggtcagaaaatgttttgattccatgagcaggcttgatccaagg
atcatccaaccctttctggccgaatgtcgccaaactatcgccaaactagataatcagaac
atgaaggctattaaaggtcttgaagacaggctctatgcattggaccagatgatagcaagc
tgcagcagactggtgaacgaacaaaaagaacttgctcagggatttttggctaatcagaag
agagctgagaacttgaaagatccttctgtgctgcctgatttgtgtttgagtcatgcaaat
cagctgatgattatgttaactaatcacagaaaactgttagatattaaacagaaatgtacc
actgccaaacaggagcttgcaaataatctgcaagtcagactgaagtggtgttgttttgtg
atgctgcatgctgaccaagatggagagaaactgcaagcactgcttcgtcttgtaacagag
ctcctggaaagggtgaaagttgtagaggctctcagcacagttcctcagatgtactgttta
gctgttgttgaggttgtgaggagaaaaatgttcataaaacactacagggagtgggcaggt
gctttaataaaagacgggaaacacctatatgaagctgaaaaggcaaaaagggaatctttt
ggtaaactctttaggaagtcttttctaaggaatcgtttgtttagaggacttgactcctgg
cctccatccttttgtacacgaaaacctcgcagatttgatagtgagcttccagacatctcg
ttgagtgacttgcagtttttgcagtctttctgtccttcagaagtacagccattactcagg
gttcccatactttgtgactttgaacctcttcaccagcatgttcgtgctctacataacctg
gtcaaggcagcacagagtttggatgaaatgtcacaaaccattacagacctgctgaatgaa
caaaaggcctccaatagtcaagcatcaccacaatctgctaccacaccaaggatggaaagc
actacaggaactgcaattgctacctcttcaagaactcctccatcactcagtcttcagggt
cccctgtgtcctcccgtgtgtcccccagctccattagaagaattgtctccagacagcatt
gatgctcacacgttcgattttgaaacgattgcccatccgaacttggagcaggctcttaag
caaggatcgttagacttggattcattagcagagagtccagaatctgactttatgtcagca
gtaaatgaatttgtaatagaagaaaatctagtgtctcctaatgtaataagtgacccacaa
agcccagaaatgatggtggaatctctttattcttcagttatcaatgcaatagacagtaga
cgtatgcaagatacgagttcttgtgtaaaggatgtttcaggagaaaacgcttctctcagt
gtttgtgtggagaagtgtagggttattgctcaagactcaaaggtacatttaagaggtata
aaagaagatctttgccatttcaaaacacttgtacaaagagaacagtgtgacttttctaat
tctttaaaatgtacttccttagaaatagtaaatacaattgaaaaggtaaaactttcactt
gaaaaagcactaaatgataaacatcaaaatgaattacagtccttgaaaagtgagtatgaa
actaaaattaataaattattggaggatggtgaagaaaataaaaagaaaatcaaaaagtta
aaaggtgacctgttaggccttgaggaagttcttcagaataagaatgatgaatttgcaata
gtaaagaatgagaaagaagctgtagtttgccttcagaatgaaaaagaccagaaattactt
gaattggaatgccaaatggagacacaaaattctgaaatcaaggaactgaggcagtcacgt
gagatagtacttgaagacttgaaaaagcttcatgttgaaaacaacgagaaactacaactc
ctgagggcagaacttgagagtttagagcaaagccatttaaaagaactggaaagcaaccta
caagccaggcatttacaggaatttgagaaggtcctagctgagcacaaggactgtttggat
aaattaaaaaaagagaaccagcatagacttgaacaaatgcaggaatctcatgaagtagtt
atgcaagagaaacaacaccaagtagaagagttacaactcaaggtttcagatctgtctgat
ttgaggtgcaagctagaagttgaacttgccttgaaagaggcagaaactgatgaaatgaag
cttcttctggaagaaagcagaaaccagcaacaagagaccttaaagtctcagattgacaag
gaaactgaaagcttaagaaaggagatagataaattaaacaataaaatacaaatcagcagt
gatgaatatcaagtgggcttatcagaactaaggactctgatgacaattgagaaagatcag
tgtatttcagagctagtaaatagatatgaagaagaatcaaatttgcttagaactgaatta
aataaagtaactcttcttcatcaaaaaactgctgaggcagaaaagagactttcagagcaa
ataagagaactgcaaagtaagttagagttggaaatgagtgccctagagaaggaaaaaaca
gaaaaattgtctctctgtgaacagcaggaaaaatacgaagcaattatccataagctaaag
gaagagaaagaactgttagtatctaaccaagaacaagacaggcagttactcattcagaag
ctcaattgtgaaaaagaggatgcagtgcaaactgcttgtaaagagtttgaattacagagg
gaagctgctgaaaaagggcttttggaaaaaatacaacaacttgagatgcaagtgaatcag
agtcctcctgctgaatcatccgccgaatcaaacttagtcgctgaacttcaggagaaactt
caggaagaaaaaatgaagttcttagagcaacttgaagagcaagagaaaagaaagaatgaa
gaaatgcagaacatcagaacatcactcactgcagagcagcagaccaactttaacactgtt
ctggcaagagagaaaatgaaaaaagaaaacataattaatgatcttagtgacaaattaaaa
gtgcttacacaacagcaagaaaaagataaggatttgattgaaacactttctgaagatcga
gctcgcttacttgaagagaagaagaagcttgaagaagaagttaataaactgagaagtagt
aatttttcttcatcagcctacttggcagcagcgtcggaggcttgtggagcctgtgcagct
gatgtgccccatgacacagacagattgtttgctgactttggggctgaagggagaatggac
tccacaatggaaaccagtatgatggctgtgcatgaaaatgttcatatgtctgaagaaaag
cagagaataatgttgttagaaaggactttgcagttgaaagaagaggaaaataagagattg
aatcaaagattgatgtcccaaagcatgtcatcagtatcctcaagacattctgaaaaaata
gcaattagagattttcaggtcggcgatttggttctcattattttggatgaaaggcatgac
aactatgtgttgttcactgttagtccaaccttgtatttcttacactcagagtcccttgca
gcattggatctcaaaccaggtgagtgtgcatcgggcgcatctaggagaccttgggtgcta
ggaaaagtgatggaaaaggaatattgccaggcaaaaaaggcacaaaacagattcaaagtt
cctttgggtacgaaattctacagagtgaaagcagtaccatggaacaagaaagtataa
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