Hirundo rustica (Barn swallow): 120750917
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Entry
120750917 CDS
T09369
Symbol
NPHP1
Name
(RefSeq) nephrocystin-1
KO
K19657
nephrocystin-1
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hrt03037
]
120750917 (NPHP1)
Cilium and associated proteins [BR:
hrt03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
120750917 (NPHP1)
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GFIT
Motif
Pfam:
SH3_1
SH3_2
SH3_9
Presenilin
Motif
Other DBs
NCBI-GeneID:
120750917
NCBI-ProteinID:
XP_039915987
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Position
3:complement(12015624..12027272)
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AA seq
675 aa
AA seq
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MAERRARGPLQRVQRRSRELRAQVEALVAESAAAALGQREALWLRCTQLKKLVEENTNAL
HALKKADEPAPVGNYSQRKEEEEKLLLKLSQQLQKLLLVLDQDNVTKNYPGDEEHQKGPR
AEEGNEEEEESEDEESEEEDTEEEEDVEKLLDNPNVRECVAVGNFDAQQEGDLTFVKGEI
LLIHDKKADGWWLAENSKGERGLVPRTYLAVPKEEEESHEESEEHIEVVDETADGTEIKK
RTDSHWSAVRAITENDTVEVLTTTGAVPAGFRPSMLSQLLEEGEEFRASYYLQPELTPSQ
LAFKDLVWNSERNTIHPRPTRVSLIVTLCSCKMIPFPGTGVRVLSRHVRLCLFDGSRVLS
NIHTVRATWLPKNPQTWTFSPRVMGILPSLLDGDSFVRSNSLSSDIGILFELGITYRCNL
TGDRGELSCGWAFLKLFTSSGVPIPSKMYELVLSGGTPYERGIEVDPSISRRAGSGVFQQ
FMSLRKQPVLLVKVKSPSVHSKDILNFLPETLVGGMCYIHLLVFYRQILGDALLKDRMSM
QSTDLICNPVLATFPQLLDQPDLMDALRSAWADKERTLKRIEKRDQEFLKSAFVLVYHDS
VFPLLCSTFLPSYKWAEEEVELSRWKVIHDFLRRSQENDGALEYLLSSENVHRAFDISEL
AYDFLGEVSENNPGQ
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcggcgggcgcgggggccgctgcagcgggtgcagcgccggagccgggagctg
cgggcgcaggtggaggcgctggtggcggagagcgcggctgcagccctcgggcagcgggag
gccctttggctgagatgtacacagctgaagaaattggtggaggagaatacaaatgctctt
catgctttgaaaaaagctgacgagcccgcgccggtggggaattacagccagaggaaggaa
gaggaagaaaagctgttgctaaaactctcccagcagctgcagaaactccttcttgtcttg
gatcaggataatgttacaaagaattatccaggggatgaggaacaccagaaaggtccccgt
gcagaagagggaaatgaagaagaggaggagagtgaagatgaagaaagcgaggaggaagac
actgaagaagaagaagatgtggagaagttgttggataatccaaatgttagagaatgtgtt
gctgttggaaactttgatgctcagcaggaaggggatctcacatttgtgaaaggtgaaatc
ctgctcatacatgacaagaaggcggatggctggtggctagctgaaaattccaagggggaa
agaggcctcgttcccaggacctaccttgcggttcctaaggaagaggaagaaagccatgag
gagtcagaagagcacatagaagtggtggatgaaacagcagatggaactgaaattaaaaaa
agaacagattcccactggagtgctgtccgagccatcacagagaatgacactgtggaggta
ctgaccaccaccggggcagttcctgcaggattccgtccatccatgctttcccagctcttg
gaggaaggtgaagagtttcgagcaagttactatttgcagcctgagcttactccatcccag
ctggctttcaaagacttagtgtggaactctgagagaaatactatccatcctagacccacc
agagtgtccctgattgtcactttatgcagctgcaagatgatccctttccctggaaccggc
gtgcgggtcctcagccggcatgtccgcctctgcctctttgacggcagccgggtgctgagt
aacattcacacagtgagagctacgtggctgcctaaaaatcctcaaacttggaccttttct
ccaagggtgatgggcatcttacccagcttgcttgatggtgactcttttgtcaggtccaac
tccctctcttcagacattgggatattgtttgagcttggcatcacctacaggtgcaatcta
acaggtgacagaggagagctgagctgtggctgggcctttctgaagcttttcacttccagt
ggggttcctattccttccaagatgtacgagctggtcctgagtggtggaactccctatgag
agaggcattgaggttgacccatcaatatcaaggagagcgggctctggggtttttcagcag
tttatgagcctcaggaaacagcctgtgcttctggtgaaagtgaagtcaccaagtgtgcac
tcaaaagacatcctgaattttctccctgaaacattagttgggggcatgtgctacatccat
ctcctagtgttttatcggcagatccttggagatgccctcctgaaggacaggatgagcatg
caaagcacagacttaatttgtaatcctgttttggcaactttccctcaacttctggatcag
ccagacctgatggatgcacttcggagtgcctgggcagacaaagaaagaacattgaagcga
attgagaagagagatcaagaattcttgaagtctgcatttgtcctggtgtaccacgactct
gtgttccctctgctctgctccacgttcctccccagctacaaatgggctgaggaagaggtg
gaattgtctcgctggaaagtgatccatgacttcctgagaaggagccaggagaacgacggt
gcactggagtacctgctgtcatcagaaaatgtccacagagcctttgatatctcagagctg
gcctatgatttcttaggagaagtgagtgaaaacaatcctggacaatga
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