Hirundo rustica (Barn swallow): 120750982
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Entry
120750982 CDS
T09369
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1 isoform X1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrt03400
]
120750982 (GEN1)
DNA repair and recombination proteins [BR:
hrt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
120750982 (GEN1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Motif
Other DBs
NCBI-GeneID:
120750982
NCBI-ProteinID:
XP_039916129
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Position
3:106021315..106042854
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AA seq
944 aa
AA seq
DB search
MGVTSLWQILEPVRQPVNLSSLRGKTLAVDLSLWVCEAQTVKKMVGVVTKPHLRNLFFRF
SFFTSMGIKLVFVMEGEAPRLKADTMSRRNEMRYGPSKKSGAVRTGRSLFKAMLKECLEL
LECLGVPWVQAAGEAEAMCAYLNAKGLVDGCITNDGDVFLYGAETVYRNFAMNAKDPHLD
SYTMSSIKEKLGCDRESLIGLAVLLGCDYLPKGVPGVGKEQALKLIETLQGQNLLQRFEQ
WKEQFQYDDNPPLVVKRVIHCSECHHPVSMSIAIGSYKEHEHNGCKFCESVRCCKPRDSK
HCCPCAWHQWEQVKQASAVEDSIRKKAKSCEGFPFSEVIQEFLVNKNKLINVKECRRPNL
LSFQLFASEKMEWTKHYACKKLLALLTRYDMIQRKSGYIDSKQLQAIRIVKTRVKNGIPC
FEIEWQKPEHYVDPEDEPGELFVVTVEEESLFQAAYPDVFALYQMEKSEVLQKKQKKKKD
RPEEKELLNAYDEVTNLLSQINLKPTYRILPVQDSMSDTKALPEDQTQQRSTGSKDALSS
ASCITTVHMSASTAALAGSSVPSQCTKYSGIASSSSVPARLQLGRTNGKGTSFSTSPAYG
GDDRDPAADLTTCRKPSHPLSHESAGNSSEYSDVTQSDMHSDSEDDLFSNDAVGQLQECS
LRERILKKAPIPSQPFSEDVVQLECLNCLKQTKETLNADRNGVSSSCQLNNLVQESKNVL
SENSASESSVHIYQDVCKNADILGEMVQKGTYISGSASLAFSGQATETLHSGCETLPASQ
KPADSTGCHIKKACIGTIWKASSKKSVCQNRCSSSEDSDDGHMDKILVDEQQKRQLNPGQ
FKKGFSKKRTSVVTSKRTNSDSALTVKGKKKSTDLKKAVNNFSMQVSLKPSSVEEVICSQ
GPEQPIERLGSDATPRDKSAILTYVWADSPLPLAERLKGRIKIN
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgggagtgacttctctatggcaaatccttgagcctgtaagacaacctgtcaacctgagt
agtctcagagggaaaacacttgctgttgatttaagtttgtgggtttgtgaagcacagacc
gttaaaaagatggttggagtagttaccaagcctcatctcagaaacctattttttcggttc
tctttctttacatcaatgggaattaaactagtgtttgtcatggaaggagaggcccccagg
ttgaaagcagacaccatgagcaggaggaatgagatgcgctatgggccttcgaagaaatct
ggagctgtaagaacagggagatctttatttaaagccatgttgaaagagtgtcttgaactg
ctggagtgtttaggtgtcccttgggttcaagcagctggagaagcagaggcaatgtgtgcc
tacctaaatgcaaaaggacttgttgatggctgcattaccaatgatggagatgttttcttg
tatggagctgaaacagtttataggaactttgccatgaacgctaaggatccacatcttgac
agttacacaatgtcctctattaaagagaaactcggttgtgacagagagtctttgattggg
ctagcagttcttctgggctgtgattatcttccaaagggggttccaggagttgggaaggaa
caagctttaaagttaattgagactctgcaaggtcaaaacttattgcaaaggtttgaacag
tggaaggaacaatttcagtatgatgataatccacctttggttgttaaaagggtaattcac
tgttcagagtgccatcatccagtttctatgtctattgctataggatcttacaaggaacat
gagcacaatggatgtaaattctgtgaaagtgtgagatgctgcaaacccagggactccaaa
cattgctgcccttgtgcatggcatcagtgggaacaagtgaaacaagccagtgcagtggag
gacagtatcagaaaaaaagccaagagttgtgagggctttccattctctgaggttatccaa
gagtttcttgtaaacaagaataaattgatcaatgtaaaggaatgtcgaaggccaaattta
ttgtcttttcagctatttgcttcagagaagatggaatggaccaaacattacgcttgtaag
aagctgttagcacttctgacacgttatgatatgatccagagaaaatctgggtacattgac
tcaaaacaactgcaggcaatacggattgtcaagacacgtgttaaaaatggaattccttgt
tttgaaattgaatggcaaaaaccagaacattatgtcgatccagaagatgagcctggggag
ttgtttgtagtcacagtagaagaagagtctttgtttcaggctgcttatcctgatgtgttt
gccctctatcaaatggaaaagtcagaagttcttcagaagaaacagaaaaaaaagaaagac
agaccagaagaaaaggaattactaaatgcttatgatgaagttaccaatcttctgtcacaa
attaatttaaagcctacgtacagaattcttcctgtgcaagactccatgtcagatacaaaa
gctctcccagaagatcagacacagcagagaagtactggatcaaaagatgcattatcttca
gcttcctgcataacaacagttcacatgtcagcatcaacagctgctcttgctggctcatct
gtgccctcacagtgcacaaagtattcagggatagcatcctcttcctctgtcccagctcgt
ctgcagctgggcaggaccaatgggaaaggaacctcctttagcacttcaccagcctatgga
ggtgatgaccgtgatccagcagctgacttaaccacatgcagaaaaccctcacatccacta
agtcatgaatcagcaggaaatagctcggaatattctgatgttacacagtctgatatgcat
tctgatagtgaagatgatctgttctcaaatgatgctgtgggacaactccaggagtgctct
ttacgtgagcgaatacttaagaaggctcccattccatcacagcctttttctgaagatgta
gtgcagctggagtgtttaaattgtcttaaacaaacaaaagaaacattgaatgctgataga
aatggtgtctcttcctcatgtcagttaaataacctagtgcaggaaagtaaaaatgttcta
tcagaaaactctgcaagtgaatccagcgtacatatctatcaagatgtgtgcaaaaatgct
gacatcctgggtgaaatggtgcaaaaaggcacttacataagtggttcagcatctctagcc
ttcagtggacaagcaacagagacacttcattctgggtgtgaaacacttccagcatctcaa
aagccagcagattcaactggctgtcacattaaaaaagcttgtattggaactatttggaaa
gcctcttctaaaaagagtgtctgtcagaacagatgctcttctagtgaagacagtgatgat
gggcacatggataaaatcctggttgatgagcagcagaaaaggcaactgaaccctggccag
tttaaaaaaggtttttcaaagaaaaggactagtgttgttactagcaaaaggacaaacagt
gactcagcccttacagttaaagggaagaagaaaagcactgatttaaagaaagctgttaat
aatttctcaatgcaagtatctctaaaaccatcctctgtagaggaagttatttgttcccaa
ggtccagagcaaccaattgaaagattgggttctgatgccacaccgcgagacaaaagtgct
attctgacttacgtatgggcagacagtccccttcccctggctgaaaggctgaagggaaga
atcaaaatcaattag
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