Hirundo rustica (Barn swallow): 120751041
Help
Entry
120751041 CDS
T09369
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120751041 (TAF1B)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
120751041 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Zn_ribbon_RRN7
Rrn7_cyclin_N
Motif
Other DBs
NCBI-GeneID:
120751041
NCBI-ProteinID:
XP_039916262
LinkDB
All DBs
Position
3:101793279..101839115
Genome browser
AA seq
612 aa
AA seq
DB search
MLTHGSWRLTATVPCSELPVAGGKCHDRFLPTRADTKGRDFNERCAQCSEVNWGLTDGGR
YYCRSCHNVTERTREVVNTDFITNSRVQTISKGLKKQEKNDGGSEWYICEGFQLVLKKQV
EALEALGVCPQMKDEILFNFWRCYLQKSKQAYCKRPAGEAVKALSVCESSTDVDSDPERP
SLLRLLSLSESEGDLQTDCSFVSSVSKASESTSVYSGSVDGSLYLMKNQKERLRMTMPMT
LSFCYMALLWVREPITLSELLRFVVEGHIPYLNVFQHFPEKMKLCGLDLKIFCVESWPVY
EEVFNKMHELAAFLDLPRFPDITESCFLHPDMLCMKYLMEANLPDELHNWTCRVVKKIGI
GEVDFLTLMPGNKSTRKVKYDVLAAAVIVVVLKLLFLLDDHYEWLLSELAEERNKNNTEG
APYFEFKKWYEVVKHSLDVKQKKLDEERAKYQWRCEKPLFYSVKKKSKVLKRRQMVVNLQ
NQFGKLSGSVQRAEKPNLSSFQLRWSEENTDGCCFHGHSLKGILQEKCGLLTAMNPDYWL
CTVKLCNEKLCGHLAHYREVEFPQSYHFVLGLFSFLLRVQPSYIHDEVCMIEHKLFNKKL
CKKLKYNTVLRK
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgctcacacacgggagctggcgcttgacggctacagtgccgtgttcagagttacccgtg
gctggtggcaagtgccatgatcgcttcttaccaaccagagctgacacgaagggcagggat
tttaatgagcgctgtgcccagtgttcagaagtgaactggggtctcactgatggaggcaga
tattattgtagatcttgccacaacgttactgagagaactagagaagttgtaaacactgat
tttattactaattcaagagtccaaacaatctccaaaggtttaaaaaagcaggaaaaaaat
gatggaggcagtgaatggtatatttgtgaaggctttcagcttgtactcaagaaacaagtg
gaagctttagaagcattaggagtatgtccacaaatgaaggatgaaattctgttcaatttt
tggaggtgttaccttcagaagagcaaacaggcatattgcaagagaccagctggggaagct
gtcaaagcattatcagtgtgtgagagcagtactgatgtggacagtgatccagagagaccc
agccttctgcgcttgctgtctctctctgaaagtgaaggggatctgcagactgactgcagc
tttgtctcatcagtcagcaaggcctcagaaagcacctctgtgtactctggatcagtagat
ggcagtttgtatttaatgaagaaccaaaaggagagactgaggatgacaatgccaatgacc
ctttcgttttgttacatggcattactctgggtgagagaaccaattacattgtctgagctc
ttaaggtttgttgttgaagggcatattccatatctgaatgtttttcagcattttccggag
aagatgaagttatgtggacttgatcttaagatcttttgtgtagagtcgtggcctgtatat
gaagaagtattcaacaaaatgcatgagcttgcagcatttttagacctgcctcgttttcca
gatataacagaaagctgctttcttcatccagacatgctgtgcatgaagtacttgatggaa
gctaatttacctgatgaattgcataattggacttgtcgagtggtgaaaaagattggtatt
ggagaagtggatttcctgactcttatgcctggaaataagtcaacaagaaaagtgaaatat
gatgttcttgcagcagcagttattgtagttgtgctgaaattactgtttttattagatgat
cactatgaatggttactttcagagcttgctgaagaaagaaataaaaacaacacagaaggt
gccccgtattttgagttcaaaaagtggtatgaggtggtgaaacattccttggatgtgaag
caaaagaaactggatgaagaaagagccaagtatcagtggagatgtgaaaagccattgttt
tattcagtcaagaaaaaatctaaagttctaaagagaagacaaatggttgtgaacttacaa
aatcagtttggcaagctgtctggttcagtgcaacgtgctgaaaagccaaatctttcaagt
tttcagttacgttggtctgaagaaaacacagatgggtgttgttttcacgggcatagcctg
aagggaattttgcaagaaaaatgtggtttactgacagccatgaaccctgactattggctg
tgtacagttaaactatgtaatgagaaattgtgtggtcatctggctcattacagagaagtg
gagtttccccagagttaccattttgtactagggttgttttcctttcttctgcgggttcag
ccgtcttacatccatgatgaggtgtgcatgatagaacacaaactttttaataaaaaactc
tgtaaaaaactaaaatacaacacagtcctaaggaagtaa
DBGET
integrated database retrieval system
