Hirundo rustica (Barn swallow): 120751179
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Entry
120751179 CDS
T09369
Symbol
LAMA2
Name
(RefSeq) laminin subunit alpha-2 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04510
Focal adhesion
hrt04512
ECM-receptor interaction
hrt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120751179 (LAMA2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120751179 (LAMA2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
120751179 (LAMA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
DUF948
DegS
Motif
Other DBs
NCBI-GeneID:
120751179
NCBI-ProteinID:
XP_039916579
LinkDB
All DBs
Position
3:complement(61344920..61691360)
Genome browser
AA seq
3262 aa
AA seq
DB search
MARESLPLLLLLAALGSRGQSPSPPPPPQRGLFPAVLNLASNALITTNATCGEKGREMYC
KLVEHVPGQPARNPQCRICDQRSRVPHQRHPITNAIDGKNTWWQSPSIQNGIEYHYVTIT
LDLQQIFQIAYVIVKAANSPRPGNWILERSLDGVDYQPWQYYAITDSECLTRYNIHPRPG
TPSYIKDDEVICTSYYSKIHPLENGEIHTSLINGRPSADDPSRELLEFTSARFIRLRFQR
IRTLNADLMMFAHKDPAEIDPIVTRRYYYSIKDISVGGMCICSGHAKACPLDPVTNKSVC
QCEHNTCGEACDQCCPGFHQKPWHAGTFLHKHECEPCNCHGKTEECYYDQDVADRNQSLN
IHGEYLGGGVCVNCSGYTSGINCETCLDGYFRPKGVLPDNPDPCQPCSCDPNGSLNDTCV
KDEKHTEGDLLPGFCHCKTGYAGESCNRCALGYTGYPECLPCNCSLEGSENDDPCIGPCI
CKEHVEGENCDRCKPGFFNLQQNNPEGCEECFCSGKTNICRQSPFTYRNIEDMNGWYLTD
LPGLIRVIPTQKRFDGHQQLSISNVAAQKVLPQIYYWSAPGPYLGNKVAAAGGHLKFTVS
YDVTEEEEEETAKLMVQSDVIIEGGGLKISTPKGIIHLQPSEEHTEEIVLKPESFSVHGT
DIPVSRREFMTVLANVKRILIRATYSNGMNAIYRLRSVIMEAADHTSRGRRVASAVELCE
CPPGYDGSSCESCWPRHRRVNGTIFGGVCAPCTCFGHADVCDDITGACLDCKHNTGGSYC
ERCLPGFYGDATKGTAEDCQLCACPLNIPSNNFSPTCHFDRHRGLICDECPAGYVGPRCE
RCAEGYFGQPLIPGGSCQPCQCNDNLDFSVPGSCDSLSGACLICKPGTTGQYCERCADGY
FGDALHARNCQPCHCHMNGSFSEICDSRTGQCECKANVIGRRCDICKPNYFWAPEKLFCI
PCGCSASGSVSLQCDMLGRCVCKSGFTGRHCEISRQVPKLQESAGSSQQIRVPPRRWGTS
SASGCPRGAYRPAALPGTFGLQSSRGCVPCNCNSFGSKSFDCDGDGQCYCQPGVTGKKCD
RCAHGFYNFEEGGCTPCECSRFGNNCDPVSGRCICPPNTVGEMCDKCAPNHWGHNIVSGC
KPCECSLIGALSSQCDLNTGCCFCRPEFSGEKCTECRLGYWNYPHCVACQCSLAGTDPQS
CDTEGKCSCIDHSGQCSCKVNVEGVHCDRCKSGTFGLSARNPLGCSSCYCFGLTTRCSEA
RGLVRVWVTLKPEQMVLPLVDEKLQRSTLSGIAFQPPEIVANIEQVMQDLRSEPIYWRLP
EQFEGRKLTAYGGKLKYAIYFEAREETGFTTYSPQVIIRGGPPTNTRIIVRHMAAPLIGQ
LTRHEIEMTEHEWEYYGDDQRGRNPVHWEYYHGNPGLNRTMSQADFTRKHYGDESRPSRT
VSREDFMNVLYDVHYILIKATHGNIMRQSRISEISLEVAESGPVSGMAPQAYLIEKCDCP
LGYTGLSCESCSPGFYRLPSPPAGGTPAQSLGSCVVCQCHGHSTMCDTETSVCQDCQHNT
AGHHCERCAPGFYGIVRGSPDDCQPCACPLSISSNNFSPTCVAEGSSDYRCTACPPGYEG
QYCQRCSAGYTGNPQIPGGSCQACECDPYGSVPIPCDPVTGQCTCKPGFTGWKCAGCEHR
HARHGTKCISCDDECTGLLLNDLDRLNQMILSVNLSGPLPAPYKMLHGFENMTQELKHLL
SPQRAPERFLQLARENLDTLVTEMDELLTRATKVTADGEQTRQDAERTNDRAKSLGQFVK
GILQAAEAANEDAIKLNETLRTQDKTLEKSLPELQSEAEGMVREMRNRELSMQEKIAQDE
LKNTEDLLDKVKKLFGEPSEKNEDLKNEVQDKLASYHSKVDDARDLLREAADKIWEADHL
SAINQKNMTMLEKRKQAVEDGRQDVEKTLQEGNDVLNEANKLANDISIAVEYVEGVADKI
QPMSDQLKDKIDDLSQEIRDRMLPEKVLQAENHAGQLNESSAVLDGILTEAKNLSFNATR
AFNAYTNIKDNTDEAERVAKEAKALANEAMQATSGPQGSLKDGAKSSLQKSFRVLNEAKM
LESDVKENGDNLDNTQNRLKDADEKNSILLRGLNETLGKLSAIPNDTAIRVQAAKDKARQ
ANDTANDVLAQIKDLNRNLLGLRKNYSKLTDDVAKTNAVVKDPVKNIADADSSIKNLEKE
ADRLLDKIKPIRELQDNLGKNISQIKELINQARKQANSIKVSVSSGGNCIRTYRPEIKKG
TYNTVIVNVKTVVADNLLFYLGSAKFTDFLAIEMRKGKVSFLWDVGSGVGRIEYPDLTID
DGFWYRIEASRTGKNGTISVRALDGPKASIVPATFSAVSPPGYTILDVDVNAVLFVGGLT
EKIKKSDAVRVTTFTGCMGETFLDSKPIGLWNFRDIEGDCKGCAVSPQVADGEGTVQFDG
DGYAMVSRPIRWNPNISTVMFKFRTFSSNSLLMYLATDDLKDFMSVELSGGRIKVSYDLG
SGTASVISNQNHNDGKWKSFTLSRIQKQANISIVDIDTNEEETIAATSTGSHFGLNLKGH
EKIYFGGLPTLRNLRPEVNLEKYTGCLKDIEISRTPYNILSSPDFVGLTKGCTLENIHTV
SFSKPGFVELQPVSFDVGTEINLSFSTRNESGIILFGTSGTIVPPRRKRRHSERKAAPLR
RKRRQTGQAYYAVFLNRGRLEVHISTGIRDPHRITIRPEAGEFHDGRAHSIRLERARGMF
SVQVDEDKVQTQRFPSDQPISVKKLFVGGTSSQFQTAPLRNIPPFEGCIWNLVINATPMD
FAQPVSFENADIGRCPTLEPEFRPPEDEDKPTRATVLVQPEPDTNGEKEGPRIPPASPPP
TPSLSLALDSCAADKEPAILEGGKQFGLSRNSHIAVAFDDTKVKNRLTIEFEVRTTADSG
LLFYMARINHADFATVQIKNGLPYFSYDLGSGNTSTMISNKVNDGQWHQIKVSRAKQEGN
LMVDGISNRTVSPKKADILDVVGMLYVGGLPINYTTRRIGPVLHSIDGCIRNFRMTESPI
DLDNPTSSFNVGKCFVNAQKGTYFEGTGFAKTVGAYRVGTDLLVEFEFRTTRMNGVLLGV
SSQKMDGLGIELVGGKVMFHVDNGAGRFSAVYEPDAPGSLCDGQWHKVRANKIKHHLELT
VDGRQVETDSPNRASTSADTNDPLFVGGYPDGVTQFGLTTNIRFKGCIRFLKLTKGTAKP
QEINFSKALELKGVQPLSCPAD
NT seq
9789 nt
NT seq
+upstream
nt +downstream
nt
atggctcgggaaagtttgccgctgctcctgctgctggcggcgctcggcagccgaggccag
tcgccgtcgccgccgccgccgccgcaaagaggactgtttcctgcagtgctgaacctggct
agtaatgctctcatcacaaccaatgctacctgtggagaaaaggggcgggaaatgtactgc
aaactggttgaacatgtacctggacagcctgcaaggaaccctcagtgccgcatttgtgat
caaaggagccgagttccacatcaacgacacccgataacaaatgcaattgatggcaagaac
acttggtggcaaagccctagtatccagaatggaattgaatatcattatgtgaccattaca
ctggacctccaacagattttccagattgcatatgttattgtgaaagcagctaactcccct
cgccctggaaactggatattagaacgttcactggatggtgtagactatcagccgtggcag
tactatgctatcacagacagcgagtgcctgacacgctacaacattcatccccggcctgga
accccatcctacataaaagatgatgaagtcatatgcacttcttattattccaaaatccat
cctctggaaaatggagagattcacacttctctaattaatggacgacctagtgctgatgat
ccatcacgtgaattactggagttcacctctgcgcgctttattcgcctgagattccagagg
atacggacactaaatgctgatttaatgatgtttgcacacaaagatccagctgaaattgat
cccattgttacacggaggtattactattctataaaagacatctccgttggaggcatgtgt
atatgttcaggccatgcaaaggcttgtccactggatccagtgaccaataaatccgtctgt
cagtgtgagcacaacacatgtggagaggcatgtgatcagtgttgtcctggtttccatcaa
aagccttggcatgctggtactttccttcataagcatgaatgtgaaccatgcaactgtcat
gggaagactgaggagtgctactacgatcaggatgtggcagacagaaatcagagtttgaat
atccatggggagtaccttgggggcggagtgtgtgtgaattgctcaggctacaccagtggc
ataaactgcgagacctgcctggatggctacttcaggccaaaaggggtattgccagataac
ccagatccatgccagccatgttcctgcgatccaaatgggtctttaaatgatacttgtgtc
aaggatgagaagcacacagaaggagatttgttgcctggtttctgtcactgcaagactggc
tatgcaggagaaagctgcaaccgatgtgccttgggttatacaggatatcctgagtgcctg
ccctgcaactgctcccttgagggcagtgaaaatgatgacccctgcatcggtccctgcatc
tgcaaggaacatgttgaaggagaaaactgtgaccgctgcaaaccaggtttcttcaatctt
cagcaaaataatcctgaaggctgtgaggaatgtttctgctctgggaaaacaaacatctgc
agacagtctccctttacttacagaaatatagaagatatgaatggatggtatctgactgac
ttaccaggtctcatcagagttattcccacgcaaaagaggtttgatggccatcagcagctt
agcatcagcaacgtggctgcgcaaaaagtactgccgcagatctactattggagcgcaccc
ggtccttatttgggcaacaaagtagcagctgctggaggacacctgaaatttacagtctcc
tatgatgtcacagaagaggaagaggaagaaacagctaaactgatggttcaatctgatgtc
atcatagagggaggtggcttgaaaatcagcactccgaaagggataattcacctgcagcct
tctgaagagcacactgaagaaattgtgctgaaaccagaatctttctcagtgcatggcacc
gatattccagtcagcaggagggagttcatgacagtccttgcaaacgtgaagaggatcctc
ataagagccacgtacagcaatgggatgaatgccatctacaggttaagaagtgttattatg
gaagctgctgaccacacttcaagggggagaagggtggcatctgcagtggagttgtgtgag
tgtcctccagggtatgatggtagctcctgtgagtcatgctggcctcgacacaggcgtgtg
aatggcacaatctttggtggcgtctgcgcaccgtgcacgtgctttggtcatgcagacgtg
tgtgatgacatcacaggagcatgcctggactgcaaacacaacacaggtggttcatattgt
gagagatgcctgcctggcttctatggtgatgcgactaaagggacagctgaagactgtcag
ttgtgtgcttgccctctaaatataccttctaacaactttagcccaacgtgtcattttgac
cgacatcgtggattaatatgtgatgaatgcccagctggctatgtgggaccacgctgtgaa
aggtgtgcagaaggctattttggacaacctctaataccagggggatcgtgccaaccatgc
cagtgtaatgacaaccttgacttctccgttcctggcagctgtgacagcttgtctggtgct
tgtctgatatgtaagccaggtacaacaggccaatattgtgagagatgtgctgatggatat
tttggtgatgctcttcatgcaaggaactgtcaaccctgtcactgtcacatgaatggctcc
ttctcggagatctgtgactctcggacgggccagtgcgagtgtaaagccaacgtcatcggg
cgccgctgtgacatctgcaaacccaactacttctgggccccagaaaagctgttttgtata
ccctgtggctgcagtgcttcaggatctgtatcactgcagtgtgatatgttgggaagatgc
gtctgcaaatcaggattcacgggcagacactgtgaaatcagcaggcaggtgcctaaattg
caagaaagtgcgggaagcagtcagcagattcgagtgcccccccggaggtggggcaccagc
agtgccagtgggtgcccacgcggtgcttaccggcctgcagctctgcctggaacatttggc
ttacagtcttccagaggatgtgttccctgcaactgcaattcttttggctccaagtccttt
gattgcgatggagacggacagtgctactgccagccgggagtgacaggaaagaagtgtgac
cgctgtgcacatgggttttacaactttgaagagggaggctgtactccctgtgagtgttca
cgttttggcaataactgtgatcccgtcagtggacgctgtatctgccctcccaatactgtt
ggagagatgtgtgacaagtgtgcgccgaatcactggggccataacattgtcagtggctgc
aagccctgtgagtgcagcctcattggagccctaagttctcagtgtgacttaaatacaggc
tgttgcttctgccgccctgaattctctggagagaaatgcactgagtgcaggttgggctac
tggaattacccacattgtgttgcttgtcagtgctccctggctgggacggatccacagagc
tgtgatacagaggggaagtgttcatgcattgatcattctggccaatgcagctgcaaggtt
aacgtggaaggtgtccactgtgacaggtgcaagtctggtacatttggtctctctgccaga
aacccacttggctgcagcagttgctattgctttggcctgactacacggtgcagcgaggca
agggggctggtccgcgtgtgggtgaccttgaagccagagcaaatggttctgccgctggtg
gatgaaaagcttcagcgtagcactctttcagggattgcattccagcctcctgaaatagta
gcaaatatagaacaggtgatgcaggatcttcggtcagaacctatttactggagacttcca
gagcagtttgagggacgaaagctgaccgcttatggagggaaactgaaatacgccatctac
tttgaagcacgagaagagacaggttttactacttactccccacaagtcatcataagaggt
gggcctcccacaaatacaagaattattgtccggcatatggctgcccctctgataggccag
ctgacaaggcatgagatagagatgacagagcatgaatgggaatattatggtgatgaccaa
agaggcagaaaccctgtacactgggaatattaccatggtaacccaggtctcaacaggaca
atgtctcaggcagatttcaccaggaaacattatggagatgagtcaagaccaagtagaact
gtatcccgggaagacttcatgaatgtgttgtatgatgttcattacattcttatcaaggca
actcatggcaatatcatgaggcagagcaggatttctgagatctcattggaagttgctgaa
agtggccctgtgtccgggatggctcctcaggcttacttgatagagaaatgtgactgccca
ttgggttatactggtctgtcctgtgagtcatgctctccaggattttacaggcttccatct
ccacctgcgggagggacacctgctcagtccttaggtagctgtgttgtatgtcagtgccat
ggacacagcactatgtgtgacactgaaacatcagtttgtcaggattgtcagcacaatact
gctggtcaccactgtgagaggtgtgcaccgggattttatggcattgtccgaggctctcca
gatgactgtcagccttgtgcttgtcccctgtccatttctagtaacaattttagccctact
tgtgttgctgaaggatctagcgactaccggtgcactgcctgcccacctggatacgaaggc
cagtactgccaaagatgttctgctggctacacaggaaacccacaaattccaggagggtcc
tgccaggcatgtgagtgtgatccatatggttccgtgcctatcccctgtgaccctgtcact
gggcagtgcacttgcaagcctggattcacggggtggaagtgtgctggctgtgaacatcgg
catgcgcgtcatggcacgaaatgcatttcttgtgatgatgaatgcacgggactccttctc
aatgacctggatcggctaaaccagatgatcctgagtgttaaccttagtggtccactgcct
gctccatataaaatgttgcatggttttgagaacatgactcaggaattaaagcatttgctt
tcacctcagagagcaccggagagatttcttcagctagcacgagaaaatctggataccttg
gtgacagaaatggatgaactactgacaagagccaccaaggtgacagcagatggtgagcag
accaggcaggatgccgagaggactaacgacagagcgaaatctcttggacagtttgtcaaa
ggcattctccaagctgctgaagctgcaaatgaagatgctataaaactgaatgagacactc
agaactcaagacaagactttggagaagagtcttcctgaactgcagagtgaggctgaagga
atggtcagagagatgagaaatagagagctcagtatgcaagaaaaaatagctcaagatgag
ttaaagaatacagaagatcttttggacaaggtgaagaaattatttggtgagcccagtgaa
aaaaatgaggatctcaaaaatgaggtccaggataaattggcaagctaccacagcaaagtg
gatgatgctcgagatctgctaagagaagctgcagataaaatttgggaggccgatcattta
tctgcaatcaaccaaaaaaatatgaccatgctggagaaaaggaagcaagctgtagaagat
ggcagacaagatgttgaaaagacccttcaggaagggaatgatgtccttaatgaagccaat
aagcttgcaaatgacatcagcatagctgtagaatatgtagaaggtgttgcagataagata
cagccaatgtctgatcagctaaaagataaaatagatgacttatcgcaagaaattcgtgac
aggatgcttccagaaaaggtgttgcaagctgagaaccatgcaggccagctgaatgaatca
tctgcagtgctggatggaatccttactgaagccaaaaacctctctttcaatgccacacgt
gctttcaatgcttatactaacatcaaggataacacagacgaagctgaaagagttgccaag
gaagccaaggctcttgcaaatgaagctatgcaagcgacatctggtccgcaaggatcactg
aaggatggtgccaagagctctcttcagaaaagcttcagggtccttaacgaagccaagatg
ctagaaagtgatgttaaagaaaatggtgataatctggacaacacacagaacaggctgaaa
gatgctgatgagaagaattccattctcttgagaggtttgaatgaaaccttaggaaagctg
tcagccattcctaacgatacagctattagggtacaggcagccaaagacaaagcaagacaa
gccaacgatactgcaaatgacgtcttggcccagattaaagacctcaatcggaatctcctg
ggcttgagaaaaaactacagtaaacttacagatgatgtggccaaaacaaatgcagttgtg
aaggatccagtcaagaacattgctgatgcagattccagtattaaaaacctagaaaaggaa
gcagatcgtctgctagataaaatcaagccaatcagagaactccaggataacttagggaaa
aatatttctcagataaaagagctgataaaccaagctcggaagcaagccaactcgatcaaa
gtgtccgtatcctctggaggcaattgtattcgcacatacagaccagaaataaagaaggga
acatataacaccgtcattgtcaatgtgaagactgtagttgctgacaatctgcttttttac
cttggaagtgccaagtttactgacttcttggccatagagatgcgcaaaggcaaggtgagc
ttcctgtgggacgtgggatctggagttggacggatagagtatccagatctgactattgat
gatgggttttggtacaggattgaagcctctaggactgggaaaaacggcacaatatctgtg
cgagctctggatggtcctaaagccagcatcgtcccagccacattcagtgctgtctcccct
cctggatataccattctggatgtggatgttaatgctgtgctctttgttggtggtttaaca
gaaaaaattaagaagtcagatgctgtaagggtcaccaccttcactggctgcatgggtgaa
acctttctagacagcaaacccataggactctggaatttcagggatattgaaggcgactgc
aaagggtgtgctgtcagcccacaggtggcagatggtgaaggaacggtgcagtttgatggt
gatggctatgccatggtgagccgtccaatccgctggaaccctaatatttccacagtcatg
ttcaagttcaggaccttctcatcaaattctctgctgatgtatctcgctactgatgacttg
aaggatttcatgagtgtagaactcagtggtgggcgtataaaagtcagctacgatctgggt
tcaggtacagcttcggttatcagcaaccaaaatcataatgatggtaaatggaaatctttc
accctgtcaagaattcaaaagcaagccaacatatcaattgtagacatagacaccaatgaa
gaagagaccatagcagcaacttctacaggcagccactttggactcaacttaaaagggcac
gagaaaatatatttcgggggattaccaaccctgagaaatctaaggcctgaagtgaactta
gagaaatacacaggttgcctcaaagacattgaaatttcaaggacaccttataacatattg
agcagtcctgactttgttggtctaaccaaaggatgcacactagagaacattcatacagtc
agcttctccaagccaggttttgtggaactgcagccagtctcctttgatgtgggcacagaa
atcaatctctccttcagcaccaggaacgagtctgggatcatcttgtttggtacaagtggc
acaattgtcccccccaggagaaagcgcaggcactctgaaaggaaagctgctcctctgagg
aggaagcgcaggcagacaggacaggcctactatgctgtgttcctgaacagaggtcggctg
gaagtgcacatctccacggggatccgggatccccacagaatcaccatcagaccagaggct
ggcgagtttcacgacggcagagcacattccatccggctagaacgagctagagggatgttc
agtgttcaagttgatgaagacaaagtccagactcagaggtttccatcagaccagcccatc
tctgttaagaaactctttgtggggggtacttcttctcagtttcagactgcacctctcaga
aacataccaccatttgagggctgtatatggaatcttgtcattaatgccacccccatggac
tttgctcaacctgtgtcctttgaaaatgcagatattggccgatgtcccacgctagaacca
gaatttaggccacctgaggatgaagataaaccaactcgtgcaacagttctggtccaacct
gaaccagacacaaatggggagaaagaagggccaagaatccctcctgcttctcctcctcca
acaccatctctatcattagcacttgattcctgtgctgctgacaaagaaccagccatttta
gaaggtggcaagcagtttggtctttcaaggaacagccacattgcagtcgcatttgatgac
accaaagtgaaaaacaggcttacaattgaatttgaagtccgaacaacagctgattctggc
ttgttgttttacatggcccgcatcaaccacgctgactttgctacagttcagataaagaac
ggtctgccttacttcagttatgatctgggaagtggaaacaccagcacaatgatttccaac
aaagtaaatgatggccagtggcaccagataaaagtaagtcgagcgaagcaagaaggaaac
ctcatggtagatggtatttctaacaggactgtgagccccaagaaggccgatatactggat
gttgtaggaatgctgtatgtgggaggattgcccattaactacacaaccagaagaattggg
ccggtcctccatagcattgatggctgcatcaggaattttagaatgacagaatcacctatt
gacctagataatccaacttccagcttcaacgttggaaaatgctttgtcaatgcacagaaa
ggaacgtacttcgagggaacaggctttgccaaaacagttggcgcatacagagtgggaaca
gatctgctcgtggaatttgaattccgtacgacacgaatgaacggtgttctcctaggagtc
agcagccagaaaatggatgggcttgggatcgaattagtaggtggaaaagtgatgttccat
gttgacaatggtgcaggccgattctctgctgtctatgagcctgatgctccaggcagtttg
tgtgatggacagtggcacaaggttcgtgcaaacaagatcaaacaccacttggagctgact
gtggatggcagacaggtggagactgacagcccaaacagggcctcgacctcggcagacaca
aacgaccctctctttgttggaggctatcctgatggtgtgacccagtttgggctgacgact
aatatccgttttaaaggatgtattcgatttctgaagctcaccaagggtactgcaaaacct
caagagattaactttagcaaagctttggagctgaagggtgtccagccactgtcgtgccct
gctgactga
DBGET
integrated database retrieval system
