Hirundo rustica (Barn swallow): 120751215
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Entry
120751215 CDS
T09369
Symbol
SIX2
Name
(RefSeq) homeobox protein SIX2
KO
K19472
homeobox protein SIX2
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120751215 (SIX2)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
120751215 (SIX2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
Phage_mat-A
YdaS_toxin
HTH_TSHZ3
HTH_72
Motif
Other DBs
NCBI-GeneID:
120751215
NCBI-ProteinID:
XP_039916636
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All DBs
Position
3:complement(27668973..27673401)
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AA seq
287 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSAHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNSNSHNPLSASMNGNKTVLGSSEDEKTPSGTPDHTSSSPALLLSSNP
GLQPLHGLGHPQGPSAIPVPSADPMHHHSLQDSILNPMSSNLVDLGS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgctcccgacttttggcttcacccaagagcaagtggcctgcgtctgcgaggtg
ctccagcaaggcggcaacatcgagcggctggggcggttcctctggtccctccctgcctgc
gagcacctccacaagaacgagagcgtcctgaaggccaaggcggtggtggccttccaccgg
ggcaacttccgcgagctctacaagatcctggagagccaccagttctcggcgcacaaccac
cccaagctgcagcagctctggctgaaggcgcactacatcgaggccgagaagctgcggggg
cgacccctaggggcggtgggcaagtaccgggtgcgccgcaagttcccgctgccccgctcc
atctgggacggcgaggagaccagctactgcttcaaggagaagagccgcagcgttctccgg
gagtggtacgcccacaacccctacccgtccccccgcgagaagcgggagctggccgaggcc
accggcctcaccaccacccaggtcagcaactggttcaagaaccgccggcagcgggaccga
gcagccgaggccaaggaaagggaaaacaacgagaattccaactccaacagccacaacccg
ctctcggcgtcaatgaacgggaataagacagttttggggagctcagaggacgagaagact
ccgtcagggaccccggatcacacctcctccagccccgcgctgctgctcagctccaaccct
gggctgcagcccctgcacggcctgggccacccccagggccccagcgccatccccgtgccc
agcgccgaccccatgcaccaccacagcttgcaggactccattctcaaccccatgtcatct
aacttggtcgatctgggctcttaa
DBGET
integrated database retrieval system
