Hirundo rustica (Barn swallow): 120751253
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Entry
120751253 CDS
T09369
Symbol
PRDM1
Name
(RefSeq) PR domain zinc finger protein 1 isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrt03000
]
120751253 (PRDM1)
Transcription factors [BR:
hrt03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120751253 (PRDM1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
SET
zf-C2H2_4
C2CH-3rd_BIRD-IDD
Zf-C2H2_ZNF451_C
zf-C2H2_jaz
zf-C2H2_6
zf-C2HE
zf-met
B129_C2H2-zf
Motif
Other DBs
NCBI-GeneID:
120751253
NCBI-ProteinID:
XP_039916729
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All DBs
Position
3:complement(71833027..71865908)
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AA seq
821 aa
AA seq
DB search
MRIKGCFLFFQAATQCSSDTVSFKNLVKGREWTMKMDMEDADMTLWTEADFEEKCTYIVN
DHPLDPSADGGTLTQAEASLPRNLTFKYASNCKEVTGVISKEYIPKGTRFGPLVGEIYTS
DTVPKNANRKYFWRIYSSGELHHFIDGFNEDKSNWMRYVNPGYSVQEQNLAACQNGMNIY
FYTIKPIPANQELLVWYCRDFAERLHYPPSRELTMMNLTQTHMNPKQHSADKDEFYQKSV
PKKEHSVKEILKMESNPKGKDFFQTNISPVTPEKDLDDLRKNYSPERCFFPRVVYPIRPH
IPEDYLKASLAYGMDRPSYITHSPIQASTTPSPSGRSSPDQSLKSSSPHSSPGVTVSPLA
PTSQEHREPYSYLNGSYGSEGLGSYPGYAPPGHISPAFLPSYNPHYPKFLLPPFNMSCNN
LSALNNINGINNFNLFPRMYPLYGNLLSGGSLSHHMLNPTTLPSSLPSEGGRRLLQPDHP
RDFLIPAPNSAFSITGAAASMKDKPCSPTSGSPTAGTAASSEHIMQPKPTSVVLAATGGE
EAMNLIKSKRNVTGYKTLPYPLKKQNGKIKYECNVCSKTFGQLSNLKVHLRVHSGERPFK
CQTCNKGFTQLAHLQKHYLVHTGEKPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLC
PAKFTQFVHLKLHKRLHTRERPHKCIHCHKSYIHLCSLQVHLKGNCPVAPASGLSMEDLN
RINEEIEKFDISDNADKLEEVEDNIDLTSIVEKDILTMLRREMEGANLKVSLQRNLGNGL
ISSGCNLYESSDMSVMKLPHGHPLPLLPVKVKQETIEPMDP
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
atgaggattaaaggctgttttctttttttccaggctgctacgcagtgtagctcggacact
gtgagtttcaagaatctggtgaaagggagagagtggacaatgaaaatggacatggaggat
gctgacatgactctgtggacagaggctgattttgaagagaagtgcacatatattgtaaat
gatcacccgctggatcccagtgccgatggaggcaccctaactcaggcagaggcttccttg
ccaaggaacttgactttcaaatacgcatctaactgcaaagaggtcactggagttataagc
aaagagtacatcccaaaaggaacacgctttggacccctggtaggagagatctataccagt
gatacggttcccaagaatgcgaacagaaaatacttttggcggatctattcaagtggtgaa
cttcaccacttcattgatggatttaacgaggacaagagcaactggatgcgttatgtaaac
cctggctactctgttcaggagcagaacttggctgcttgtcagaatggaatgaacatctac
ttctacaccatcaagcccatccctgccaaccaagagctgcttgtgtggtattgccgagac
ttcgcagagaggctgcactatcccccctccagagagctgacaatgatgaacctcacacaa
acccacatgaatccaaagcagcacagcgctgataaagatgagttttatcagaaaagtgtc
ccaaagaaggagcacagtgtgaaagaaatcctgaaaatggaatccaatcctaaaggaaaa
gacttctttcagaccaacatttcgccagttactccagaaaaagacttggatgatttacgt
aagaactatagcccggagaggtgtttcttccctcgagttgtctacccgatccgacctcac
attccagaagactatctgaaagcttccttagcatatggcatggacagacccagctacatt
actcactcacccatccaggcgtctactacaccaagtccttccgggaggagcagcccagac
caaagtttaaaaagttcaagccctcacagtagtccaggggtcacagtttcacctctggca
cctacttcccaagagcacagagagccatactcttacttgaacgggtcatatggctctgaa
ggattggggtcttatcctggatatgcaccccctggccacatctcacctgcctttctacca
tcctataacccccattaccccaaattcctgttacctccattcaatatgagctgtaataac
ctgagcgctttgaacaatatcaacggcatcaacaatttcaatctcttcccaaggatgtac
cctctttatggcaacctgctcagcggaggtagcctttcccatcacatgctcaaccccacc
acgctccccagctcattgcccagtgaaggaggccgtcgactgctgcagcctgatcatccg
agagacttcctcataccagcacccaacagtgccttctctatcacgggcgctgctgccagc
atgaaggacaagccatgcagccctaccagtgggtcccccaccgctgggacagcagccagt
tcagaacacataatgcaacctaaacctacctcagtggtgttggctgccaccggcggtgaa
gaagccatgaatctcattaaaagtaagaggaatgtgaccggttacaaaaccctcccctac
ccactgaaaaagcagaacgggaagatcaagtacgaatgcaatgtgtgctccaagaccttt
ggccagctctccaatctgaaggtgcacctccgagtacacagcggagagagaccatttaaa
tgccagacttgcaacaagggcttcacgcagctggctcacctccagaagcactatctggta
catacaggagaaaaaccccacgagtgtcaggtttgtcacaagcggttcagcagcaccagc
aatctcaaaacccacctgcggctccactctggagagaagccttaccagtgcaagctctgc
ccagccaaattcacccagtttgtgcacctgaagctgcacaagcgtctccacacccgggaa
cgcccccataaatgcatccactgccacaagagctacattcacctctgcagcctccaggtc
cacctgaagggcaactgccccgtcgccccggcctccggcctctctatggaggacctgaac
cgaatcaatgaggagatcgagaagtttgacatcagtgacaatgctgacaagctggaagaa
gtggaggacaatatcgacttaacatccatcgtggagaaggatatactgaccatgctcagg
agggaaatggaaggagctaacctgaaagtctctctacagaggaacctgggaaatgggctt
atctcctcaggatgcaacctttacgagtcgtcagatatgtcagttatgaagttgcctcac
ggtcacccactacctctgttacctgtaaaggtcaagcaagaaacaattgaaccaatggac
ccttaa
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