Hirundo rustica (Barn swallow): 120751265
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Entry
120751265 CDS
T09369
Symbol
VCPIP1
Name
(RefSeq) deubiquitinating protein VCPIP1
KO
K11861
deubiquitinating protein VCIP135 [EC:
3.4.19.12
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hrt01002
]
120751265 (VCPIP1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrt04121
]
120751265 (VCPIP1)
Enzymes [BR:
hrt01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120751265 (VCPIP1)
Peptidases and inhibitors [BR:
hrt01002
]
Cysteine peptidases
Family C64
120751265 (VCPIP1)
Ubiquitin system [BR:
hrt04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
OTU
120751265 (VCPIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VCIP135_N
OTU
OTU1_UBXL
ubiquitin
Motif
Other DBs
NCBI-GeneID:
120751265
NCBI-ProteinID:
XP_039916759
LinkDB
All DBs
Position
1:35141345..35157436
Genome browser
AA seq
1215 aa
AA seq
DB search
MSQPQQPPPPSPQQQPQPPPPSASKKRDRRIFSGTCPDPKCQARLFFPAHGPQGSGSIEC
TDCGRRHEQRQLLAVEEVTDPDLVLHNLLRNALLGVSGAGPPRRNTELVKVNGLSNYHCK
LLAPILARYGMDKQTGKAKLLTEMNQGDIFDCSLLGDRAFLIEPEHVETMGYGKDRSGSL
IYLHDTLEDIKKANNSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRENLKKHFEE
NLSHYKALFHDFIDAAEWEDIINECDPLFVPPEGVPMGLRNIHIFGLANVLHRPIILLDS
LSGMRSSGDYSATFLPGLIPLEKCTGKDGMLNKPICIAWSSSGRNHYIPLVGIKGAALPK
LPRKLLPKAWGVPQDLIKKYIMLEEDGGCIIGGDRSLQDKYLMRLVAAMEEVFMSKHGIH
PSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHRCLICGALSEHHVPPEWLAPG
GKLYNLAKSTHGQLRPDKNYSFPLNSLVCSYNPVKDVLVPDYGLSNLTVCNWCHGNLMRR
VREDGSVLYIDGDRTNTRSSGGKCGCGFKHYWEGKEYDNLPEAFPITLEWGGRVVRETVY
WFQYESDTSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVNTILHQTAKKNPDDYTPVNI
DGAHAQRADDVQQGQELESQLPTKIILTGQKTKTLHKEELNMSKAERTIQQNITDQASVM
QKRKSEKLKQEHKGQPRTASPGAVREGPSSAPATPTKTPYSPTSAKEKKIRITTNDGRQS
MLTLKCTTTFLELQEGIAREFNIPPYLQCIRYGFPPKELLPPKEGMENEPVPLQHGDRIA
IEILKGKEEGRQAASAHSAHAVKHEDVAVTSKISSRDLQEQVDKEMYSLCLLATLMGEDV
WSYAKGLPQLFQQGGVFYSIMKKTTGLADGKHCTFPHLPGKNFVYNAAEDRLELCVDAAG
HFPIGPDVEELVKEALSQVRAEATSRSREASPSHGMLKLGSGGVVKKKSEQLHNITAFQG
KGHSLGTASSSQQHDQRARETPLLRKHSTETDFSPSARIEPSVFTAASGNSELIRIAPGV
VTMRDSRQLDPTLIEAQRKKLQEMVSSIQASMDRHLRDQNTEQSASVDVSQRKVEAVSST
AKTGSFQAALPESFSAPGGTAHLNTESTDGNVVNSVGTTFPSRSKAQKGNSVEELEEMDS
QDAGITNATEPMDHS
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagccccagcagccgccgccgccgtcccctcagcagcaacctcagccgccgcct
ccgtccgcctctaagaagcgagaccggcgcatcttctcgggcacctgccccgatcccaaa
tgccaggcgcggctgttcttcccggcgcacgggccgcagggcagcggcagcatcgagtgc
acggactgcgggcggcgccacgagcagcggcagctgctggccgtggaggaggtgacggac
cccgacctggtgctacacaacctgctgcggaatgcgctgctgggcgtcagcggcgccggc
ccgccccgcaggaacactgagctcgtcaaagtcaatggcctctccaactaccactgcaag
ctcctggcccccatcctggcccgctatgggatggacaagcagactggcaaagccaagctc
ctcacggagatgaatcagggagacatctttgactgctctctcctgggcgaccgcgccttc
ctcatcgagccagagcacgtcgaaaccatgggttacgggaaggaccgctccggcagcctc
atctaccttcacgacaccctggaggacatcaagaaggccaacaacagtcaagagtgcctc
attcctgtccacgtagatggagatggccactgccttgtccatgcagtctcacgagcgctt
gttggcagagaactgttctggcatgctctccgagagaacctaaagaagcattttgaggag
aatctaagccactacaaggcacttttccatgactttattgatgctgcagagtgggaggat
attatcaatgaatgtgaccctttgtttgttcctccagaaggtgtgccaatgggccttagg
aatattcacatctttggtctggccaatgtgcttcaccggcctatcatcctgttagactcc
ttgagtggaatgcgaagctctggagattattcagcaacattcctccctggtctgatacct
ctggaaaaatgcacggggaaagatggcatgttgaacaagccgatctgtatagcgtggagt
agctcaggacgtaaccattatattcctctggttggaataaaaggtgctgctttacctaag
ctgcctaggaagctactacctaaagcctggggagttcctcaagacctcatcaaaaagtac
atcatgttagaggaggatggtggttgtattattggaggagacagaagtttacaggataag
tacttgatgaggcttgttgctgcaatggaggaggttttcatgagtaaacacggtatccac
cccagtcttgtagctgacgtgcatcagtatttctacagaaggactggtgtcataggggtc
cagcccgaagaggtcactgcagctgccaaaaaagcagtgatggacaaccgccttcacagg
tgcctcatctgtggggctctttcagagcatcacgttcccccagagtggctggctcctggg
gggaagctgtataacctggcaaagagtactcatggccagctaaggcctgacaaaaattac
agttttcccctgaacagtttggtgtgttcatacaaccccgtgaaggacgtgctggtacca
gactatggcctgagtaatttgactgtttgtaactggtgccacggtaacttaatgcgtcgt
gtcagagaagatgggtctgttttgtatattgatggagacagaactaatactagatcttca
ggtggcaaatgtggctgtggattcaagcattactgggaaggtaaagaatacgacaatctg
cctgaagcttttcctataactctagagtggggtggaagagtggtgagagagactgtctac
tggttccagtatgaaagtgacacctctttgaacagcaacgtgtatgatgtcgccatgaaa
cttgttaccaagcacttccccggtgaatttggtagcgagattcttgtgcagaaagttgtc
aacacaattctgcaccaaactgccaaaaagaaccctgatgattatacccctgtaaatatt
gatggtgctcacgcccaaagagctgatgacgtgcagcaaggacaagagttagagtctcaa
cttccaaccaaaatcattttgactggacagaagactaaaactttgcacaaggaggagttg
aatatgagcaaagctgaaagaactattcagcagaacattacggaccaggcttccgtaatg
cagaaacggaaaagtgaaaaattgaaacaagagcataaagggcaacccaggactgcttct
cctggggctgtccgtgaggggccctcgtctgcacctgctacaccaaccaaaaccccgtat
tctccaacgtctgcaaaagaaaagaaaattcgaataaccaccaatgacgggaggcagtcg
atgcttaccttgaagtgcactaccaccttcctggaactccaggaaggcatagcgagagaa
tttaatattcccccgtatttgcaatgtattcgctacggctttcctccgaaagagcttctg
cctcccaaagaaggcatggaaaacgagcctgttcctttgcagcacggtgacaggattgcc
atagaaatcctgaagggcaaggaggaaggcaggcaggctgcctcagcgcactcagcccat
gctgtgaagcacgaagatgttgctgtgaccagtaagatctcgtcgagggatctgcaggag
caagtcgacaaggagatgtattcgctctgtcttctggcaacgctcatgggagaagatgtt
tggtcttacgcaaaggggcttcctcagttgtttcagcagggtggagtgttctacagcata
atgaagaaaacaacaggtttggctgatggcaagcactgcacttttccacatctgcctggt
aaaaactttgtgtacaatgcagcagaagacagattagagctgtgtgtggatgctgctggg
cacttcccgatcggtcctgatgttgaagagctggttaaagaggccttaagtcaagtgcga
gctgaagctacttcaagaagcagggaagcaagtccttcacatggaatgctgaagctgggt
agtggtggagtagtgaaaaagaaatctgaacaactgcataacataactgcatttcaagga
aagggtcattccctaggaactgcatctagtagtcaacaacatgatcaaagagccagggaa
acaccacttttaagaaagcatagcacagaaacggacttcagtccttctgctagaattgag
ccttctgtattcacagctgcttctggtaacagtgagcttattcgaattgctccgggagtt
gtgacaatgagagacagcaggcagcttgaccccactttgattgaggcgcagagaaaaaag
ttgcaggaaatggtctcttctattcaggcttcaatggatagacatttgcgggatcagaat
acagagcagtcagcatcagttgatgtatctcaaagaaaagtagaggcagtgagttcaact
gctaaaactgggagctttcaggctgccttacccgaatcattctctgcaccaggtggtact
gcacacttgaatactgaatcaactgatggtaacgtggtgaattctgtgggaacaacattc
ccttcaaggtctaaagcacaaaagggaaattctgttgaggagcttgaggagatggatagt
caagatgcaggaatcactaatgcaactgagccaatggatcactcttga
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