Hirundo rustica (Barn swallow): 120751293
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Entry
120751293 CDS
T09369
Symbol
PEX6
Name
(RefSeq) LOW QUALITY PROTEIN: peroxisome biogenesis factor 6
KO
K13339
peroxin-6
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120751293 (PEX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120751293 (PEX6)
Membrane trafficking [BR:
hrt04131
]
Autophagy
Pexophagy
Other pexophagy associated proteins
120751293 (PEX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_16
AAA_lid_3
AAA_5
AAA_22
Mg_chelatase
AAA_25
nSTAND3
Vps4_C
PEX6_4th
RuvB_N
RNA_helicase
TsaE
AAA_33
DUF815
NPHP3_N
bpMoxR
TIP49
AAA_28
Parvo_NS1
IstB_IS21
AAA_24
AAA_14
Motif
Other DBs
NCBI-GeneID:
120751293
NCBI-ProteinID:
XP_039916803
LinkDB
All DBs
Position
3:complement(212050..224399)
Genome browser
AA seq
979 aa
AA seq
DB search
MAVAVLRPLDAPPAELWPATALLVAPAGLCAALRGRGGALVLAVRPAGLGGAQPVLLSAV
ALEAGGRRGAELWLRGALLRRLGLAAGRRVAVWPVRRPPALAWVLLGAAAGRAGRLAGGA
VLARRGEAAAGAGPRARAPPVLEARPALPGLAGRGTRAALAPPPPPPPPPGAARGPPRPP
XAPPLVSRFAAAAAAAEPRLAVGCPAGRAXGGGAEVWVSRRGLLALGLFQGEWVRVGAEG
AARRHLAALLARPPPWEYPRAARRAPADGAALLAPALAFNLGCDPAAAAHLRLQRYERTG
AADGKGSRSVLCVPPFAKELHLEIVCSPAYCTRGSYDCVLYRHFETPRLVQEGDILCVPT
FGNAEFIELNADKFLRWPELYFKVKKTVGMVEGEQSEGYLVDTRNTSLYLVGSTNSTVPS
APAYDSNELWSSLSPVGLSDVVKQLCDALRPHLKRRPGALSGVGSVLLSGPSGSGKLMAV
RAVCSCLNLHLFKVDCVGLCADTSAAAEERARAAFSQAQRYRPCVLLLKDVEVLGRERDG
LGEDARVIAALRQLLLDRDPAPSHPVLVIGTTCEPQDVPTDVQTAFLHEVKIEAPSEEQR
RLMLSVLTAGLPLGKEVSLSKLARRTAGFVLGDFCALLSHSSRAACTRIQALSFPGGLSE
EVERDFCAAGFPVLEEDFSVALDQLHDAHSQAVGAPKIPSVSWQDVGGLQEVKKEILDTI
QLPLEHPELLSLGLCRSGLLLYGPPGTGKTLLAKAVATTCAMTFLSVKGPELINMYVGQS
EENVRNVFARARAAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSSRE
VFVIGATNRPDLLDPALLRPGRFDKLVYVGISEERESQLQVLSAVTRRFELDPSVNLTTI
LEKCPAQLTGADIYALCSDAMMCAVKRKVEWIEEGLDTEKSALILTMEDFLQAAARLQPS
VSEQELLRYRLIQQKFAAS
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggccgtgctgcggcctctggacgctcccccggccgagctgtggccggccacg
gcgctgctggtggcgccggcggggctgtgcgcggcgctgcgcgggcggggcggcgcgctg
gtgctggcggtgcggccggcggggctcggcggggcgcagccggtgctgctgagcgccgtg
gcgctggaggcgggcgggcggcgcggcgcggagctgtggctgcgcggggcgctgctgcgg
cggctggggctggcggcgggccggagggtggccgtgtggcccgtgcggcgcccgccggcg
ctggcctgggtgctgctgggggcggcggcggggcgggcggggaggctggcggggggcgcg
gttctggcgcggcggggcgaggccgctgccggggccgggccccgggcccgggccccgccg
gtgctggaggcgcgcccggcgctgccagggcttgctgggcgcgggacgcgagccgccctc
gccccgccgccgccgccgccgccgccgccgggcgccgcccgcggcccgccccgccctccc
ncggcgccgccgctcgtgtcccgcttcgccgccgccgccgccgccgccgagccgcggctg
gctgtcggttgcccggcgggacgggccngcggcggcggggccgaggtgtgggtgagccgg
cgcgggctgctggcgctggggctgttccagggcgagtgggtgcgggtgggcgcggagggg
gcggcccggcggcatctggcggcgctgctggcgaggccgccgccctgggagtacccgcgg
gccgcccgccgcgccccggccgacggcgccgcgctgctggccccggccctggccttcaac
ctgggctgcgaccccgccgccgccgcgcacctccgcctgcagaggtacgaaaggaccggc
gccgcggatgggaagggcagccggtccgtgctgtgtgtgcccccgttcgccaaggagctg
cacctggagatcgtctgctcgccggcgtactgcacccggggaagctacgactgcgtgctc
tacaggcacttcgaaacgccgcggctggtccaggagggagacatcctgtgtgttccaacg
tttggaaatgctgagtttatagagctaaatgcagacaagttcctaaggtggccggagctt
tatttcaaggtgaagaagactgtgggcatggtggaaggcgagcagtccgaggggtacctg
gtggacacccgcaacacgtctctctatctggtgggttcaacaaacagcactgtcccatct
gccccagcctatgacagcaacgagctctggagcagtttgtctcccgtggggctttccgac
gtcgtgaagcagctctgcgatgctctgcggcctcacctgaagcgtcggcctggcgcgctg
agcggcgtgggcagcgttctcctctcggggcccagcggcagcgggaagctgatggctgtc
agagctgtgtgcagctgcctcaacctccacctcttcaaggtggattgcgtcggcctgtgc
gctgacaccagcgcggccgcggaggagagggcgcgggcggccttcagccaggcccagcgg
taccggccctgcgtgctgctgctcaaggacgtcgaggtgctcggcagagagcgggacggg
ctgggagaggacgccagggtcattgccgccctgaggcagctgctcctggacagggacccg
gcgccgagccaccccgtcctggtgatcggcacaacctgcgagccccaggacgtccccaca
gacgtgcagacggctttccttcatgaggtgaagatcgaagccccttcagaggagcagagg
aggttgatgctgagcgtgctgactgccggcctgcctctgggcaaagaagtgagcctgtcc
aagctggcccgcaggactgccggatttgtgctgggagatttctgtgccttgctgtcccac
agcagccgggctgcttgcacccgcatccaggccttgagttttccaggcgggctgagcgaa
gaagtggagagggatttttgcgctgccgggttcccggtgctcgaggaggatttcagtgtg
gcgctggaccagctgcatgacgcccactcgcaggcagtgggagccccgaagatcccctcg
gtgtcctggcaggatgttggtgggctgcaggaggtgaagaaggagatcctggacactatc
cagctgcccctggagcacccagagctgctgtcgctggggctgtgccgctctggtctgctg
ctgtacgggcctccagggacagggaagaccttgctggcaaaagccgtggcaacaacgtgt
gccatgacattccttagcgtgaaagggccggagctcatcaacatgtacgtggggcaaagc
gaggagaacgtgcgcaacgtgtttgccagggccagggcggctgctccctgcattatattc
tttgatgagctggattccctggcccccagtcgtgggcgaagtggagattcagggggtgtc
atggacagagttgtgtcacagctccttgcagagctcgacggccttcattccagcagagag
gtgtttgtcattggagccaccaacaggcctgacctcttggacccggctctgctgcggccg
ggcaggtttgacaagctggtctacgtgggcatcagcgaggagcgggagtcgcagctgcag
gtgctgagcgctgtcaccaggaggtttgaactggatccatccgtgaatctcaccaccatc
ctagaaaagtgcccagctcagctgacaggagcagacatctacgccctgtgttcagatgcc
atgatgtgtgctgtcaaacgcaaggtggagtggattgaggaagggctggacactgagaag
tctgctctgatcctgaccatggaagactttctgcaggctgctgccaggttgcagccatca
gtctctgagcaggagctgctcaggtacagactcatccagcagaagtttgcagcctcctaa
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