Hirundo rustica (Barn swallow): 120751421
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Entry
120751421 CDS
T09369
Symbol
PPHLN1
Name
(RefSeq) periphilin-1
KO
K21872
periphilin-1
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrt03036
]
120751421 (PPHLN1)
Chromosome and associated proteins [BR:
hrt03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120751421 (PPHLN1)
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Gene cluster
GFIT
Motif
Pfam:
Periphilin_C
HIF-1a_CTAD
Motif
Other DBs
NCBI-GeneID:
120751421
NCBI-ProteinID:
XP_039917147
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All DBs
Position
4:29582482..29647405
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AA seq
378 aa
AA seq
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MAYRRDEMWSGGRYDYERVPRERLPPRIHGDGDYHRIVNIVPKKPPLLERPGDGNYSRYD
DYGHAEYRDYDTGRSFAHDRRNGPPHRGGRKDESGYRWARDGHSTRPEYRDVRDGFRRRS
FYSSHYVRDRSPHKRDSPFFRESPGSRRDSPHSRSGSSVSSRSYSPERSKAYPFHQHSRN
MSSLHKRNTSSQQGKERTVQSLKTSRDASPSGSTAVPSSKALEKSNRLSEKELTEAASKW
AAEKSEKAEESNLPELTEYDAGSSAPLYIEQTEESGVNLMESAEIYEDGQFLDRSKAIAA
KTKEIEQVYRQDCETFGMVVKMLIDKDPSLEKSIQFALRQNLHEIDFIRMVCRNTKEVAL
ILHVQGLLSNSSFPRIYG
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcatatcgaagagacgaaatgtggtctggagggcgatacgactatgaaagagttcca
agagaacgtctccctccaaggattcatggtgatggcgattaccacagaatagtaaacatt
gtgcccaagaagccaccactgcttgagagacctggggatgggaattacagtcgctatgat
gattacggtcacgctgagtacagagactatgacacaggtcggagttttgcccatgaccgg
agaaatggccctccacaccgaggtggacgtaaggatgaatcaggatacagatgggcaagg
gacggtcattctacaagacctgaatacagggacgtcagagatggcttcagaagaagaagt
ttctattcctctcattatgtgagagatcgatcccctcacaagagggactctcctttcttc
agggagtcgccagggagccggagggactctccgcacagcagatctggctctagtgtcagc
agcaggagctactctcctgaaagaagcaaagcctatcctttccaccagcatagcagaaat
atgtcatctttacataaaagaaatacttcttctcagcaaggtaaagagaggacagttcag
tcactgaaaacatcaagagatgcatcaccttcagggtccacagcagtaccttcatcaaag
gccttggagaagagcaacagactgtcagaaaaggaacttacagaagctgcaagcaagtgg
gcagctgaaaagtcagagaaggccgaggaaagcaatttacctgaattaacagagtatgat
gctgggtcttcagctccgttatacatcgagcaaacagaggaatcaggagtaaatctaatg
gagagtgcagaaatatacgaggacggccagtttcttgatcgttcaaaagcaattgcagcc
aagacaaaggagattgaacaggtctacagacaagactgtgaaacgtttggcatggtagtg
aagatgctaattgataaagatccatcattagagaagtccattcagtttgccctgaggcag
aatttgcatgaaatagatttcatcagaatggtgtgcagaaacacaaaggaagtagcactg
attttgcatgttcaagggctgctgtccaactcctcattccccaggatttatggataa
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