Hirundo rustica (Barn swallow): 120751453
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Entry
120751453 CDS
T09369
Symbol
SNX13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
120751453 (SNX13)
Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120751453 (SNX13)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Syntaxin_2
DUF6395
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
120751453
NCBI-ProteinID:
XP_039917269
LinkDB
All DBs
Position
1:126149212..126213687
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AA seq
968 aa
AA seq
DB search
MLTETSLSIWGWGSLGLVLFLVTFGPFAIFYFAFYILCFVGGGFVVTLLFGKSNSEKYLE
QCEHSFLPCTSVGIPKCIEEMKREARPIKIDRRLTGANIIDEPLQQVIQFSLRDYVQYWY
YTLSDDESFLLEIRQALQYALVQFSARSKETDWQPYFTTRLVDDFGTHLRVFRKAQQRIA
EKGDQMKDQAEELVDTFFEVEVEMEKEVCRDLVCTSPKDEEGFLRDLCEVLLYILLPPGD
FQNKIMRYFVREILSRGILLPLINQLSDPDYINQYVIWMIRDSNCNYEAFMNIIKLSDNI
GELEAVKDKASEELQYLRSLDTAGDDINTIKNQINSLLYVIKVCDSRIQRLQSGKEIDTV
KLAANFGKLCTVPLDHILVDNVALQFFMDYMQQTGGQAHLFFWMTVEGYRVTAQQQLEVL
QSRQKDGKHQTNQTKGLLRAAAFGVYEQYLSEKASPRVNIDDNLVAKLAETLNHEDPTPE
IFDDIQRKVYELMLRDERFYPSFKQNVLYVRMLAELDMLKDPSFRGSDDGEGESFNGSPT
GSINLSLDDLSNGPSDETVQLHAYISDTVYADSDPYAVAGVCNDHGKTYALYAITVHRRN
ANSEEMWKTYRRYSDFHDFHMRITEQFENLANILKLPGKKTFNNMDREFLEKRKKDLNAY
LQLLLNPEMMKASPALAHYVYDFLENKAYSKGKGDFARKMDTFVNPLRNSMRNVSNAVKS
IPDSLAEGMTKMSDNMGKMSERLGQDIKQSFFKVPPLMQKTYSDPDHCRVAAPIDDNVDD
NIPLRVMLLLMDEVFDLKERNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDWMTSPEQ
VADAVKRFRDAFWPNGILAETVPRRDKAIRMRTRVAGKTKLLEVMPDELKHIIGAETTRK
GILRVFEMFQHSQLNKRMVYVFLERFLETLFPQNKFPELFSKLHSRSKQMQRYKQRLHST
QAPSLQKR
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgttaacagagaccagtctttccatatggggatggggaagtcttggccttgtgcttttt
ctagtaacttttggacccttcgctatattttactttgcattttatatcctctgctttgtg
ggtgggggttttgtggttactcttttatttggaaaaagcaattcagaaaaataccttgag
cagtgtgaacattcatttctcccttgtacttcagttgggatccctaagtgcatagaagaa
atgaaacgtgaagccagacctattaagattgacagaagactgaccggtgcaaacataatt
gatgagcctttacaacaggtaatccagttttccctgagagactatgtgcagtattggtat
tacacactaagtgatgatgaatcctttcttctggaaattaggcaggctcttcagtatgca
cttgttcagttttctgccaggtcaaaggaaacagactggcagccttatttcactacacga
cttgttgatgactttggcactcatcttcgagttttcagaaaagctcagcaaaggatagca
gagaaaggtgatcagatgaaagatcaagctgaggaacttgtagatacattctttgaggtt
gaagttgaaatggaaaaagaagtctgtcgtgatctagtctgcacttctcccaaagatgaa
gaaggattcctaagggatctgtgtgaggttttactgtatatattgctacctcctggagac
ttccagaacaagatcatgcgatactttgtcagggaaatcctctcccgaggaattcttctt
ccattaataaaccagctcagtgatcctgattatattaatcagtatgtcatatggatgatt
cgtgattccaactgtaactatgaggcctttatgaatattattaaattaagtgataatata
ggagagttggaagcagtgaaagataaagcaagtgaagaactgcaatatcttcgatctcta
gatacagcaggagatgatatcaacactataaaaaatcaaataaacagtttattatatgtt
attaaagtatgtgattcaagaattcaaaggttgcagtcaggaaaagaaatagatactgtg
aaactggcagcaaactttggaaaactttgcacagtccctctggaccatattctggtagac
aatgttgcactacagttttttatggattacatgcagcaaactggtggccaagcacatttg
tttttctggatgacagtggaaggatacagggttacagcacagcaacagctggaggtactt
caaagccggcagaaagatggaaaacatcagactaatcagaccaagggtctgttaagagca
gctgcatttggagtttatgagcaatatttatcagaaaaggcatctccaagagttaatatt
gatgacaacttagtagcaaaacttgcagaaacactgaaccatgaggatccaacacctgaa
atctttgatgacattcagagaaaggtgtatgagttgatgctgcgagatgagaggttctac
ccttcgttcaagcagaacgttttgtatgtgcgtatgttagctgagctggatatgctgaag
gatcccagtttcagaggatcagatgatggtgaaggagaatcttttaatgggtctcctact
ggcagcattaatctgtccttagatgacctttcaaatggcccttctgatgagacagttcag
ctccatgcatacatctcagatactgtctatgctgactctgacccatatgctgtggcagga
gtgtgcaatgaccacggcaagacgtacgcgctgtacgccatcactgtccaccggcgaaac
gccaacagtgaggagatgtggaagacgtatcggcgctacagcgacttccatgactttcac
atgaggatcactgagcagtttgaaaaccttgcaaatatactaaaacttcctggcaaaaaa
acattcaacaatatggacagagagtttttagaaaagaggaaaaaggatttaaatgcttat
ttgcagctcttgttaaatcctgaaatgatgaaagcctctccagctttagcccattatgtg
tatgacttcctggagaataaagcctacagcaaagggaagggggattttgcacggaagatg
gatacgtttgtaaatccactgcgtaactctatgagaaatgtatcaaatgcagtcaagtct
atccctgacagcctggcagagggaatgactaaaatgtcagacaacatgggtaaaatgtca
gagagattgggacaagacataaagcaatcatttttcaaggtgccgcctttgatgcagaaa
acttattcagatcctgaccattgccgagttgcagcaccaattgatgacaatgtggatgac
aatattccgctgagagtaatgctcctacttatggatgaagtctttgatttaaaggagaga
aatcagtggttaagaagaaatataaaaaatctgcttcagcaacttattagagcaacatat
ggtgacacaattaatagaaaaatagttgatcatgttgattggatgacatctcctgagcaa
gtagcagatgcagtgaaacgcttcagagatgctttttggcccaacggcattttagcagaa
acggttccacgaagggacaaagctattagaatgagaacaagagtggcagggaaaaccaag
ttgctggaggtaatgccagatgaactgaaacacatcataggcgctgagactacgcggaaa
ggcattcttcgggtctttgaaatgttccagcatagtcagctgaataagagaatggtgtat
gtgtttctggagagattcctagaaaccttatttccacaaaataagttccctgagctgttc
agcaaactgcattcaaggtcaaagcaaatgcagagatataagcagagactacactctact
caagcgccttccttacagaaaaggtga
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