Hirundo rustica (Barn swallow): 120751461
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Entry
120751461 CDS
T09369
Symbol
ARFGEF1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120751461 (ARFGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrt04131
]
120751461 (ARFGEF1)
Membrane trafficking [BR:
hrt04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
120751461 (ARFGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
120751461
NCBI-ProteinID:
XP_039917289
LinkDB
All DBs
Position
1:34838737..34925730
Genome browser
AA seq
1843 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAETGKQSPPHGEAKS
GSSTLPPVKSKTSFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGNAPDST
APGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMEKERHRQQHHLQHSPVSHHE
PESPQLRHIPAQADQLSKDHERELDHSTNDVDKNLQEDMEAENGSDISSAENEQTEADQA
TAAENLSKADGGTYDGESNECEEKAQEIVESIVQEMVNIVVGDVEGTAGGDGTTVSLEDG
SDSENIQANGIPGTPISVAYTPSLPDDRLSVSSNDTQESGNSSGPTPGAKFSHILQKDAF
LVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPVFRTNEMFINAIKQY
LCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTSSFDH
KWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGMSNVQ
ELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPTEQDNSETKHPETINRYGS
LNSLDSTASSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFNKKPKRGIQYLQEQG
MLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSALRMF
LEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHSPQVK
NKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSSKQSVASE
KQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAFSVGL
QDCDDTEVASLCLEGIRCAIRIACIFNIQLERDAYVQALARFTLLTVSSGITEMKQKNID
TIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSFTGTK
DQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAIVDFV
RWLCAVSMDELLSATHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGCNPNE
DVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCIAQMV
NSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTIVFEKHFPATIDSFQDAV
KCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMNVAPEDRVWVRGWFP
ILFELSCIINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKLPEQQ
TEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSGTNCL
ENVVILNGEKFTLEIWDKTCTCMLDIFKTTIPHALLTWRPVGGEFCSGSPSDAKEKLDTI
SQKSVDIHDSIQPRSSDGRPYQPSTGTAVAEETSKARPAAKFPEQKLFAALLIKCVVQLE
LIQTIDNIVFFPATSKKEDAENLAAAQRDAVDFDVHVDTQDQGMYRFLTSQQLFKLLDCL
LESHRFAKAFNSNNEQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYTDESRTSA
WEEVQQRLLNVCSEALSYFLTLTSESHREAWTNLLLLFLTKVLKISDERFKAHASFYYPL
LCEIMQFDLIPELRAVLRRFFLRIGVVFQISQPPEQEAGISKH
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaagggaagaagacgaaaaacatgtttctgacccgggccctggagaagatcctg
gccgacaaggaggtgaagaaggcgcatcactcccagctgcgcaaagcctgcgaggtggca
ctagaggaaataaaggctgaaacaggaaagcaaagtccccctcatggagaagccaagtct
ggttcaagcactcttccacctgtgaaatcaaagacaagcttcattgaagcggacaaatac
ttcctaccatttgaattggcatgccagtccaagtgccctaggattgtcagtacatcccta
gattgtttacagaaacttatagcatatgggcacttgacagggaatgctccagacagtact
gctccaggaaaaaaactaattgatagaattatcgagacaatatgtggctgttttcaaggc
cctcaaacagacgaaggagttcagctacaaataataaaggctttgctcactgcagtaaca
tctcaacacatagaaatccacgaaggaactgtactgcaggctgtaagaacatgttacaat
atctacctagcaagcaaaaatcttataaatcaaactacagccaaggccactctaacacaa
atgctgaatgtcatctttgcacgtatggaaaatcaagcacttcaggaagccaaacagatg
gaaaaggaaagacacagacagcaacaccatctccagcactctccagtgagccatcatgag
cctgaatcacctcagttgagacatattccagcacaggctgaccagctgtccaaagaccat
gagagggagcttgaccacagcacaaatgatgtggacaagaaccttcaagaagatatggag
gcagaaaatggatctgacatttctagtgctgaaaatgaacagacagaagctgaccaagcc
acagcagcagaaaatctttctaaagctgatggaggaacatatgatggtgaaagcaatgag
tgtgaagagaaggcacaagaaattgtagaaagtattgtgcaggaaatggtgaacatagta
gttggagatgtggaagggactgcaggcggtgatggcacaactgtatcgttagaggatggc
agtgacagtgaaaacattcaggcaaatggaattccagggactccaatttctgttgcttat
acaccatctttacccgatgacagattatctgtctcttccaacgatactcaggaatctgga
aattcttcaggacctacccctggtgctaagttttcccacattttacaaaaggatgccttc
cttgtattcaggtcactgtgtaaactctccatgaagcccctgtcagatggaccaccagat
ccaaaatctcatgaactgcgatcaaagattctttcattgcagttgcttctgtccattctg
caaaatgcaggaccagtcttcaggactaatgagatgttcattaatgctataaagcagtac
ctctgtgttgcactgtcaaaaaatggagtctcatcagttccagaagtttttgaactttca
ctttccatatttcttaccctcctgtcaaactttaagactcatctaaagatgcagattgag
gttttcttcaaagaaattttcctgtatatcttggaaacttctactagctcatttgatcat
aagtggatggttatacaaacgctgacaaggatatgtgcagatgctcagagtgtggtggac
atctacgtgaactatgattgtgatttaaatgcagcaaatatatttgaaaggctggttaat
gacttatcaaagattgctcaaggaaggggtagccaagaacttggcatgtccaatgttcag
gaattaagtttgaggaaaaaaggattggaatgcttagtatcgatcttgaagtgcatggtg
gagtggagtaaggatcaatatgtaaatcccaattcccagacaacccttggccaagaaaaa
cccacagaacaggacaacagtgaaaccaaacaccctgagacaattaacagatatggaagc
ttaaattctttggattctactgcttcatcaggaattggcagttacagcacacagatgtct
ggcactgacaacccagagcagtttgaagtcctaaagcagcaaaaggaaataatagaacaa
ggaattgacttattcaacaagaaaccaaagagggggattcagtacctgcaagaacaagga
atgcttggcactacccctgaagatattgctcaattcttgcatcaagaggaaagattagat
tcaactcaggttggggagttcctgggagacaatgataaatttaacaaagaagtcatgtat
gcatatgtagaccaacatgacttttcgggaaaggatttcgtttcagctctgcgcatgttt
ctagaaggatttcgtctaccaggagaagctcaaaaaattgatcgcttaatggagaaattt
gctgctagatatttagaatgtaaccaagggcaaactctttttgctagtgcagatactgca
tatgttttagcttactcaattatcatgttgacaacagatcttcacagtccacaggttaag
aataaaatgacaaaagaacagtatattaaaatgaatagaggcatcaatgacagtaaagat
ctccctgaagaatatttgtctgctatttataatgaaatagctggaaagaagatttcaatg
aaagaaacaaaagaattaacaatacccacgaagtccagtaaacaaagtgttgctagtgag
aagcagagaagacttctatataacttggaaatggaacaaatggctaaaacagctaaagct
cttatggaggcagtgagccatgttcaggccccttttactagtgcaacacacctggagcat
gtgagacccatgtttaagttggcatggacacctttcctggctgccttcagtgtgggtctg
caggactgtgatgacaccgaagttgcctctctttgtttggagggtatacgatgtgcaatc
cggattgcttgcattttcaacattcagcttgaaagagatgcctatgttcaagcattagca
agatttacgttgcttacagtgagttctgggattactgaaatgaagcagaagaatattgac
accattaaaactctcatcacggtggctcatacagatggaaactatttaggaaactcctgg
catgagattctgaaatgcatcagtcaacttgaactggcgcagttaataggaactggagta
aaacctcgctacatctcagggacagtgcgtggcagggaaggttcttttactggaacaaaa
gatcaggcacctgatgaatttgtggggctgggactggttggtggaaacgtggattggaag
cagatagcaagtattcaggaatccattggtgaaactagctctcaaagcgttgttgttgct
gtagacagaatatttacgggttctacaaggttggatggaaatgctattgtggatttcgtt
cgctggctttgtgctgtgtctatggacgagctgctgtctgctacccaccctcgaatgttt
agtctgcagaagatagtagagatttcttattacaacatgggccgcataaggttacagtgg
tctaggatctgggaagttattggcgatcattttaataaggttggctgcaatcccaacgaa
gatgtagctatttttgcagtagactcattaaggcaattgtcaatgaagttcttggaaaaa
ggagaacttgctaatttccgattccagaaggacttcctaagaccatttgaacatatcatg
aagagaaacaggtctcctactattcgagacatggttgtacggtgtattgcacagatggtg
aactcccaggctgctaacatccgttctggctggaaaaacattttttcagtatttcatctg
gcagcctcagatcaggatgaaagtatagtggaactggcattccagactacaggacacatt
gtcacaatcgtgtttgaaaaacacttcccagcaaccatagattctttccaggatgcagtg
aagtgcttgtctgaatttgcctgcaatgcagcatttccagataccagtatggaagcgatc
cgcctcattcgccactgtgcaaaatacgtgtctgacaggcctcaggcattcaaggaatac
acaagtgatgatatgaatgtagctcctgaagacagagtgtgggtgcgaggatggttccca
attctctttgagttatcctgtatcatcaatagatgcaaattagatgtaagaaccaggggc
ttaacagtaatgtttgaaataatgaagacatatggccatacctacgaaaaacactggtgg
caagatttgtttcggattgtcttcaggatatttgacaacatgaaactgccagaacagcag
actgagaaagccgagtggatgacaactacctgtaaccacgcactttatgcaatatgtgat
gtatttacacagtatttagaagtacttagtgatgttcttttggatgatatctttgcacag
ctgtactggtgtgtgcagcaagacaatgaacaactggcacgatctggtacaaactgtttg
gagaatgttgtcatccttaatggggaaaagtttaccctagaaatctgggataaaacttgc
acttgcatgctggatattttcaaaactacaatccctcatgcgctgctgacttggcgacca
gtcggtggggagttctgctctggctctccctctgatgcaaaagaaaaactggatacaatc
tcccagaagtcagtggatatccacgattccatccagcctcgatcttcagatggacgccca
tatcagcccagcacagggaccgcagtcgctgaagagacgagtaaagccaggccagcagca
aaatttccagaacagaagttgtttgctgctcttttgatcaagtgtgtagtacagctggaa
ctcattcagacgatcgacaacattgtattcttcccagcaactagcaaaaaagaggatgca
gagaatctagcagcagcacaaagagatgcagtagactttgatgtccatgtggatactcag
gatcaagggatgtatcgtttcctaacatcacagcagcttttcaaacttctcgattgtctg
ctggaatctcacagatttgctaaagcatttaattcaaacaatgaacaaagaactgctctc
tggaaagcaggtttcaaaggcaagtcaaagcccaacctgctgaagcaggagacgagcagc
ctggcgtgtgggctgcgcatcctgttccgcatgtacacggacgagagccgcaccagcgcc
tgggaggaagtccagcaaaggctgctgaatgtctgcagcgaggctctgagctattttctc
actcttacatcagaaagtcatcgggaagcctggactaaccttttactcttatttttgact
aaagtcctgaagataagtgatgaaaggttcaaggcccatgcctcgttctactatcctttg
ttgtgtgaaatcatgcagtttgaccttattcctgagctgcgagctgttttgcgaaggttt
ttcctgcggattggcgtggttttccaaatatcccagccaccagaacaagaggctggaata
agcaagcattag
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