Hirundo rustica (Barn swallow): 120751539
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Entry
120751539 CDS
T09369
Symbol
FGD6
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 6
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
120751539 (FGD6)
Domain-containing proteins not elsewhere classified [BR:
hrt04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
120751539 (FGD6)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_13
IQ_SEC7_PH
PH_11
RHG20_PH
FYVE_2
PH_9
EF-hand_FSTL1
PH_20
DZR_2
Motif
Other DBs
NCBI-GeneID:
120751539
NCBI-ProteinID:
XP_039917465
LinkDB
All DBs
Position
4:complement(46848016..46929857)
Genome browser
AA seq
1427 aa
AA seq
DB search
MSSAEIKKPPVAPKPKFVLGHKAAPPPVAPKPDLVLPGGIQAARKTKPAIAPKPKVLKSS
SIPEVKPPSSTRKSTKSFEEHREDSSQTLDHLNYKNETSEGSTGNTAYILPVSPCKFECL
HKLGNAENTCKTQIILEHFDTLENIKLGERNALPLGDSHNEKLASRSQVVLKASILEEKL
KDVLTHGVFPSSSPVRHRYADKFDKGDDSSSKNDVKIEFMELVQSSSSSEVAKGKQQNAD
GKISADGFQMSETCPGLTENNHSCYSPLDKETLENENLSSNRIFSGEVGMKADADKTSPE
ISSVLSSKVLPIPKPRKPRAACLVRQDGIDSTGEGTKEPSVSEKDSYGVVDQSLKKPTRI
YVLGQSVCYNNNAEVFHPEKCEVTQSNAEKIPQEKETAVKEPSHNLLPQFSHRSPDLVRH
VEASLNADHNSMDEIKDDTSMPDAMDKRTDFVRCDILSMSLPKQLKLASNQQSSASYSLH
VSPQYLENKEVKIKDESSPKVIPKKPQRHGLPAAGLLKKAASAELVDKSSYTSSEDKSNS
LLEGSHFAHPRAKEQDALSSCDIPKLSSEKPVWKLPHPILPFSGNSESLKTATSFSHLTV
VTKPRAKSLSAVDIDRTDKSCKDHHKKNSLKKLLNMKLSVCLKKSDFQKFLSKGGQSVES
AVASLSNGDGCGNNSRNIGFLGSERKAKSAKVHSLEINSLALQKKRQRNRSQPEMRNNQR
LESLERHGLLGEDLSQMPLNSVTSICDPEYENVRHYEEIPEYENLPFAMGARRNLCSEWQ
NSSSMEDQNTDFYEVEEPCEATRRHWRLDRSLEEHHDHPNVVMGVLQSDEEDIMNSSDED
DDTNSDSSKGEIDPQEDKQGKAAGKKTKVYHIAKEIMSSEKVFVDVLKLLHIDFRDAVAH
ASRQLGKPVIEDRILNQILYYLPQLYELNRDLLRELEERLSHWLEHQRIADIFVKKGPYL
KMYSTYIKEFDKNVALLDEQCKKNAGFASVVKDFEMSPRCASLALKHYLLKPVQRIPQYR
LLLTDYLKNLLEESADYRDTQDALAVVIEVANHANDIMKQGDNFQKLMQIQYSLNGHHEI
VQPGRVFLKEGTLMKLSRKVMQPRMFFLFNDALLYTTPVQSGMYKLNNMLSLAGMKVKKP
TQEAYQNELNIESVERSFILSASSATERDEWLEAISKSIEEYTKKRITFNPSKSLEEADP
EKQEEDSPLGSKAPIWIPDTRATMCMICTSEFTLTWRRHHCRACGKIVCQACSSNKHGLD
YMKNQPARVCDHCFRELQKQDNQCTPKSGSPVNHKSPSSALSTVLQSIPSGRKPKKIPAA
LKEVSANTEDSTMSGYLHRSKGSKKPWKHLWFVIKNKVLYTYAASEDVAALESQPLLGFT
VSEVKGENSESRVFHLLHKNTLFYIFKADDPHSAQKWIEAFQEGTVL
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgccgaaattaagaagccaccagtggcccccaaaccaaaatttgtcctagga
cacaaggcagcgcctccacctgttgcaccgaagcctgatcttgtacttcctggtgggata
caagcagcaaggaaaaccaagccagcaattgcaccgaaaccaaaggttctcaagagctcc
tccatcccggaagttaaaccgccatcgtctacacggaaaagcacaaaaagctttgaggag
cacagggaagattcttctcaaactctagaccatttgaactataaaaatgaaacctcagaa
gggagtactggaaacacagcatatattctacctgtgtcaccttgcaaatttgaatgcctt
cataaacttggaaatgcagagaacacttgtaaaactcagataattcttgagcacttcgac
accttagagaacatcaagcttggtgaaagaaatgcactacctctgggggatagtcacaat
gaaaaattggcaagtagaagtcaagtggttttgaaagccagcattttggaagagaaactt
aaggatgtcctaactcatggtgtatttcctagcagcagtcctgtgaggcataggtatgca
gacaaatttgacaaaggggatgacagcagctctaagaatgatgttaaaatagagtttatg
gaacttgtacaatcttcatcatcttctgaggtagctaaagggaagcaacaaaatgctgat
ggtaagattagtgctgatgggtttcagatgtctgaaacttgtcctggtttgactgaaaat
aatcacagttgttattccccattggacaaggaaactctagagaatgaaaatttaagtagc
aataggatattttcaggtgaagtagggatgaaagcagatgctgataaaacctcccctgaa
atatcttcagtcctgagctccaaagtgcttcctatccctaagccaagaaagccacgtgct
gcatgtctagtccgtcaggatggcatagacagcacaggagaaggaacaaaggaaccatct
gtttcagagaaagattcttatggtgttgtggaccaaagcttaaaaaagccaacaagaatt
tatgtccttggtcaaagtgtttgttataacaataatgcagaagtgtttcatcctgaaaaa
tgtgaggtaactcaaagcaatgcagaaaaaatacctcaggaaaaggagactgctgtgaaa
gagccttcacacaaccttttgcctcagttttcacacagaagtcctgatttggtgagacat
gttgaggcttctttaaatgcagaccataactccatggatgagataaaagatgacaccagt
atgccagatgctatggacaaaaggactgactttgtcaggtgtgatatcctgtccatgagt
ttgccaaagcagctcaaattggcaagcaatcagcagtcatctgcttcctacagcctccat
gtttccccacaatacttggaaaataaagaagttaaaataaaggatgagagttccccaaaa
gttattcctaagaaaccacagaggcatggccttccagctgctggcttgctgaaaaaagct
gcatcagcagagcttgtggacaaaagttcttacacctccagtgaggacaaatcaaacagc
cttctagaaggatctcacttcgcacatccacgagctaaggagcaggatgcgctttcatcc
tgtgacatacccaaactttcttctgaaaaacccgtctggaagttacctcatcctattctt
ccgttttcaggaaattctgaatcattaaaaactgctaccagcttcagccacttgactgtt
gtgacaaagcctagggccaagtctttgtctgctgtggacatagacaggacagacaagtcc
tgcaaagaccatcacaagaaaaatagcttgaaaaagcttctgaacatgaaactgtcggtt
tgcttaaagaaaagtgacttccaaaaatttctgtctaaaggcggccagtcagttgagagt
gctgttgccagcctttctaatggggatgggtgtggaaataacagcaggaatatagggttt
ctaggcagtgaaaggaaagctaaatctgccaaggtgcattccttagaaataaatagtctg
gcattacagaagaagaggcagagaaacagaagtcagcctgagatgcgaaataaccaaagg
ctggagtctttagaaaggcatggacttttgggtgaggatttgtcccaaatgcctttgaat
tctgtaaccagcatttgtgatccagaatatgagaatgtgcgtcactatgaggaaatacct
gagtatgagaacttaccttttgctatgggtgctaggagaaatctctgctctgaatggcag
aactctagcagcatggaagaccagaacactgacttctatgaagttgaggagccttgtgaa
gctacaagaaggcactggagacttgacaggtccttagaagaacaccatgatcatcccaac
gtggtaatgggagttcttcagtcagatgaagaagatatcatgaacagttctgatgaagat
gatgacacaaattctgattccagcaaaggggagattgatcctcaagaagataaacagggc
aaggcagctgggaaaaaaacaaaggtataccatattgccaaggagatcatgagctcagag
aaagtgtttgtggatgtgctaaagctcttacacattgatttccgggatgctgtggcacat
gcctctaggcaacttggaaagccagtgattgaggacagaatcctgaatcagatcctctac
tacctacctcagctctacgaactcaatcgggacctcctgagggaactggaagagcgatta
tctcactggcttgagcatcaaagaattgctgatatatttgttaaaaagggtccctaccta
aagatgtattcaacttacatcaaagaatttgataaaaatgttgcattattagatgaacag
tgtaagaagaatgcaggatttgcatcagtagtcaaagacttcgagatgagcccccgctgt
gctagtctggccctcaagcactatctgcttaagccagttcagaggattccccaatacagg
ctcctgttgacagattatttaaagaatcttttagaagaatctgcagactatagggatact
caagatgctttagctgttgtcatagaagttgcaaaccatgccaatgacatcatgaagcag
ggagataactttcagaaactcatgcagatccaatacagtttaaatggacaccatgagatt
gtacagccaggaagagtttttttgaaagagggaacactgatgaagttatcacggaaggtc
atgcagccaagaatgttttttctgtttaatgatgccctgttgtatactactccagttcag
tcagggatgtataaactcaacaacatgctgtcattggcgggaatgaaggttaagaagcca
acccaggaagcatatcagaatgaactgaacattgaaagcgtagagagatccttcattctt
tcagcgagttctgctacagaaagagatgagtggttagaagctatctccaagtcgattgaa
gaatatacaaaaaagagaatcacatttaatccgagcaaaagtcttgaagaggcagatcca
gagaaacaggaagaagatagtcctctgggatcaaaggctcccatctggatccctgacacg
agagccacgatgtgcatgatctgtacgagtgaattcacactgacatggagaaggcaccac
tgcagggcatgcgggaagattgtctgtcaagcttgttcatcaaacaaacatggcttagac
tacatgaaaaaccagccagccagagtatgtgatcattgctttagggagctacaaaagcaa
gataaccagtgcacacctaagagcggatccccagtcaaccataaatctccatcaagtgcc
ttgtctacagtattacaaagtattccctctggaagaaagccaaaaaaaattccagcagcc
ctcaaagaagtttcagcaaatacagaagactctacaatgagtggctacctacacagatct
aaaggcagtaagaaaccatggaaacacctgtggtttgttataaaaaataaggtgctatac
acatatgctgctagtgaggatgtggcagcattagagagccagcctttacttggattcaca
gtcagtgaagtaaaaggtgaaaactcagagtctagagtgttccatttactgcacaaaaac
actttattttacatattcaaggcagatgatccccattcagctcaaaagtggatagaagct
tttcaagaaggcactgtattatag
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